Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0467
(660 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 421 e-118
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 420 e-118
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 420 e-118
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 413 e-116
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 413 e-116
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 413 e-116
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 411 e-115
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 410 e-115
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 409 e-114
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 388 e-108
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 351 2e-97
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 344 3e-95
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 244 5e-65
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 145 2e-35
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 145 2e-35
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 135 3e-32
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 100 7e-22
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 99 2e-21
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 83 2e-16
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 79 2e-15
At5g43500.2 68418.m05318 expressed protein 36 0.032
At5g43500.1 68418.m05319 expressed protein 36 0.032
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 34 0.096
At2g36910.1 68415.m04527 multidrug resistance P-glycoprotein (PG... 29 2.1
At3g28860.1 68416.m03602 multidrug resistance P-glycoprotein, pu... 29 2.7
At3g24130.1 68416.m03030 pectinesterase family protein contains ... 29 2.7
At1g65780.1 68414.m07465 tRNA-splicing endonuclease positive eff... 29 2.7
At5g67080.1 68418.m08458 protein kinase family protein contains ... 29 3.6
At5g04940.2 68418.m00523 SET domain-containing protein (SUVH1) c... 29 3.6
At5g04940.1 68418.m00522 SET domain-containing protein (SUVH1) c... 29 3.6
At2g19780.1 68415.m02311 leucine-rich repeat family protein / ex... 29 3.6
At4g01900.1 68417.m00250 P II nitrogen sensing protein (GLB I) i... 28 6.3
At2g46430.1 68415.m05778 cyclic nucleotide-regulated ion channel... 28 6.3
At4g30520.1 68417.m04333 leucine-rich repeat family protein / pr... 27 8.4
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 421 bits (1036), Expect = e-118
Identities = 198/220 (90%), Positives = 209/220 (95%)
Frame = +1
Query: 1 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVL 180
LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVL
Sbjct: 96 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVL 155
Query: 181 DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 360
DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT+AEREIVRD+K
Sbjct: 156 DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTSAEREIVRDVK 215
Query: 361 EKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCG 540
EKL Y+ALD+EQEM TA S+S+EKSYELPDGQVITIG ERFRCPE LFQPS +GME+ G
Sbjct: 216 EKLAYIALDYEQEMETANTSSSVEKSYELPDGQVITIGGERFRCPEVLFQPSLVGMEAAG 275
Query: 541 IHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRM 660
IHET YNSIMKCDVDIRKDLY N V+SGGTTM+PGIADRM
Sbjct: 276 IHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRM 315
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 420 bits (1034), Expect = e-118
Identities = 196/220 (89%), Positives = 210/220 (95%)
Frame = +1
Query: 1 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVL 180
LRVAPEEHP+LLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVL
Sbjct: 96 LRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVL 155
Query: 181 DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 360
DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGYSFTTTAEREIVRDIK
Sbjct: 156 DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDIK 215
Query: 361 EKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCG 540
EKLCY+ALD+EQE+ TA S+S+EK+YELPDGQVITIG+ERFRCPE L+QPS +GME+ G
Sbjct: 216 EKLCYIALDYEQELETAKTSSSVEKNYELPDGQVITIGSERFRCPEVLYQPSMIGMENAG 275
Query: 541 IHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRM 660
IHET YNSIMKCDVDIRKDLY N V+SGGTTM+PGIADRM
Sbjct: 276 IHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRM 315
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 420 bits (1034), Expect = e-118
Identities = 196/220 (89%), Positives = 210/220 (95%)
Frame = +1
Query: 1 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVL 180
LRVAPEEHP+LLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVL
Sbjct: 96 LRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVL 155
Query: 181 DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 360
DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGYSFTTTAEREIVRDIK
Sbjct: 156 DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDIK 215
Query: 361 EKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCG 540
EKLCY+ALD+EQE+ TA S+S+EK+YELPDGQVITIG+ERFRCPE L+QPS +GME+ G
Sbjct: 216 EKLCYIALDYEQELETAKTSSSVEKNYELPDGQVITIGSERFRCPEVLYQPSMIGMENAG 275
Query: 541 IHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRM 660
IHET YNSIMKCDVDIRKDLY N V+SGGTTM+PGIADRM
Sbjct: 276 IHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRM 315
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 413 bits (1016), Expect = e-116
Identities = 194/220 (88%), Positives = 208/220 (94%)
Frame = +1
Query: 1 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVL 180
LR+APEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVL
Sbjct: 96 LRIAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVL 155
Query: 181 DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 360
DSGDGVSHTVPIYEG++LPHAILRLDLAGRDLTDYLMKILTERGY FTTTAEREIVRDIK
Sbjct: 156 DSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKILTERGYMFTTTAEREIVRDIK 215
Query: 361 EKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCG 540
EKL +VA+D+EQEM T+ S+S+EK+YELPDGQVITIG ERFRCPE LFQPSF+GME+ G
Sbjct: 216 EKLSFVAVDYEQEMETSKTSSSIEKNYELPDGQVITIGAERFRCPEVLFQPSFVGMEAAG 275
Query: 541 IHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRM 660
IHET YNSIMKCDVDIRKDLY N V+SGGTTM+ GIADRM
Sbjct: 276 IHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFSGIADRM 315
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 413 bits (1016), Expect = e-116
Identities = 194/220 (88%), Positives = 208/220 (94%)
Frame = +1
Query: 1 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVL 180
LR+APEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVL
Sbjct: 96 LRIAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVL 155
Query: 181 DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 360
DSGDGVSHTVPIYEG++LPHAILRLDLAGRDLTDYLMKILTERGY FTTTAEREIVRDIK
Sbjct: 156 DSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKILTERGYMFTTTAEREIVRDIK 215
Query: 361 EKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCG 540
EKL +VA+D+EQEM T+ S+S+EK+YELPDGQVITIG ERFRCPE LFQPSF+GME+ G
Sbjct: 216 EKLSFVAVDYEQEMETSKTSSSIEKNYELPDGQVITIGAERFRCPEVLFQPSFVGMEAAG 275
Query: 541 IHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRM 660
IHET YNSIMKCDVDIRKDLY N V+SGGTTM+ GIADRM
Sbjct: 276 IHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFSGIADRM 315
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 413 bits (1016), Expect = e-116
Identities = 194/220 (88%), Positives = 208/220 (94%)
Frame = +1
Query: 1 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVL 180
LR+APEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVL
Sbjct: 96 LRIAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVL 155
Query: 181 DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 360
DSGDGVSHTVPIYEG++LPHAILRLDLAGRDLTDYLMKILTERGY FTTTAEREIVRDIK
Sbjct: 156 DSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKILTERGYMFTTTAEREIVRDIK 215
Query: 361 EKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCG 540
EKL +VA+D+EQEM T+ S+S+EK+YELPDGQVITIG ERFRCPE LFQPSF+GME+ G
Sbjct: 216 EKLSFVAVDYEQEMETSKTSSSIEKNYELPDGQVITIGAERFRCPEVLFQPSFVGMEAAG 275
Query: 541 IHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRM 660
IHET YNSIMKCDVDIRKDLY N V+SGGTTM+ GIADRM
Sbjct: 276 IHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFSGIADRM 315
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 411 bits (1013), Expect = e-115
Identities = 196/220 (89%), Positives = 207/220 (94%)
Frame = +1
Query: 1 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVL 180
LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVL
Sbjct: 96 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVL 155
Query: 181 DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 360
DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGY FTTTAEREIVRDIK
Sbjct: 156 DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDSLMKILTERGYMFTTTAEREIVRDIK 215
Query: 361 EKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCG 540
EKL YVALD+EQE+ TA +S+S+EK+YELPDGQVITIG ERFRCPE LFQPS +GME+ G
Sbjct: 216 EKLAYVALDYEQELETAKSSSSVEKNYELPDGQVITIGAERFRCPEVLFQPSLIGMEAPG 275
Query: 541 IHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRM 660
IHET YNSIMKCDVDIRKDLY N V+SGG+TM+PGIADRM
Sbjct: 276 IHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRM 315
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 410 bits (1009), Expect = e-115
Identities = 194/220 (88%), Positives = 207/220 (94%)
Frame = +1
Query: 1 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVL 180
LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVL
Sbjct: 96 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVL 155
Query: 181 DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 360
DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD+LMKILTERGYSFTTTAEREIVRD+K
Sbjct: 156 DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTERGYSFTTTAEREIVRDMK 215
Query: 361 EKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCG 540
EKL Y+ALDFEQE+ T+ S+S+EKS+ELPDGQVITIG ERFRCPE LFQPS +GME+ G
Sbjct: 216 EKLSYIALDFEQELETSKTSSSVEKSFELPDGQVITIGAERFRCPEVLFQPSMIGMENPG 275
Query: 541 IHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRM 660
IHET YNSIMKCDVDIRKDLY N V+SGGTTM+ GI DRM
Sbjct: 276 IHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFGGIGDRM 315
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 409 bits (1006), Expect = e-114
Identities = 193/220 (87%), Positives = 207/220 (94%)
Frame = +1
Query: 1 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVL 180
LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVL
Sbjct: 96 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVL 155
Query: 181 DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 360
DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD+LMKILTERGYSFTTTAEREIVRD+K
Sbjct: 156 DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTERGYSFTTTAEREIVRDMK 215
Query: 361 EKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCG 540
EKL Y+ALD+EQE+ T+ S+S+EKS+ELPDGQVITIG ERFRCPE LFQPS +GME+ G
Sbjct: 216 EKLSYIALDYEQELETSKTSSSVEKSFELPDGQVITIGAERFRCPEVLFQPSMIGMENPG 275
Query: 541 IHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRM 660
IHET YNSIMKCDVDIRKDLY N V+SGGTTM+ GI DRM
Sbjct: 276 IHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFGGIGDRM 315
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 388 bits (955), Expect = e-108
Identities = 177/220 (80%), Positives = 201/220 (91%)
Frame = +1
Query: 1 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVL 180
LR+ PEEHP+LLTEAPLNPK NREKMTQIMFE+F P+MY+ IQAVLSLY+SGRTTGIVL
Sbjct: 97 LRLEPEEHPILLTEAPLNPKVNREKMTQIMFESFAFPSMYIGIQAVLSLYSSGRTTGIVL 156
Query: 181 DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 360
DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT+YL KI+ ERGY++TT+AEREIVRDIK
Sbjct: 157 DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTEYLTKIMMERGYTYTTSAEREIVRDIK 216
Query: 361 EKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCG 540
EKLCY+A+D+EQEM A S++++++YELPDGQVITIG ERFRCPE LFQ S +GME+ G
Sbjct: 217 EKLCYIAVDYEQEMEKATTSSAIDRTYELPDGQVITIGAERFRCPEVLFQTSLIGMETSG 276
Query: 541 IHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRM 660
IHET YNSIMKCDVDIRKDLY N V+SGGTTM+PGIADRM
Sbjct: 277 IHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRM 316
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 351 bits (864), Expect = 2e-97
Identities = 167/220 (75%), Positives = 191/220 (86%)
Frame = +1
Query: 1 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVL 180
LRVAPEEHPVLLTEAPLNPKA+REKMTQIMFETF P+MY+ +QA LSL+ASGRTTG VL
Sbjct: 51 LRVAPEEHPVLLTEAPLNPKADREKMTQIMFETFAVPSMYIGMQAALSLHASGRTTGTVL 110
Query: 181 DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 360
DSGDGVS+ VPIYEG ALPHAILRLDLAGR LT+YLMKI+ ERGY T+AERE+VRDIK
Sbjct: 111 DSGDGVSYIVPIYEGSALPHAILRLDLAGRHLTNYLMKIMMERGY---TSAEREVVRDIK 167
Query: 361 EKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCG 540
E+ Y+ALD+EQEM A S++++++YELPDGQVITIG ERFRCPE LFQPS +GME+ G
Sbjct: 168 EQFGYIALDYEQEMEKATKSSAIDRTYELPDGQVITIGAERFRCPEVLFQPSLIGMETSG 227
Query: 541 IHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRM 660
IHE YNSIMKCD DIRKDLY N V+SGGTTM+ GI +RM
Sbjct: 228 IHEKTYNSIMKCDDDIRKDLYGNIVLSGGTTMFRGIEERM 267
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 344 bits (846), Expect = 3e-95
Identities = 159/220 (72%), Positives = 186/220 (84%)
Frame = +1
Query: 1 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVL 180
LRV PEEHPVLLTEAP NPKANREKMTQIMFE+F+ PAMYV++Q+VL LY+SGRTTG+VL
Sbjct: 85 LRVDPEEHPVLLTEAPYNPKANREKMTQIMFESFDVPAMYVSMQSVLYLYSSGRTTGVVL 144
Query: 181 DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 360
D G+ VSHTVP+YEGYALPH ILRLDL GRDLTDYL++I+TERGY++TT+AEREIVRDIK
Sbjct: 145 DLGERVSHTVPVYEGYALPHGILRLDLGGRDLTDYLIEIMTERGYTYTTSAEREIVRDIK 204
Query: 361 EKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCG 540
EKLCYVALD+EQEM +++K+Y LPDGQ ITI ERF CPE LFQPS +G ES G
Sbjct: 205 EKLCYVALDYEQEMEKTTKGWTIDKTYVLPDGQEITIEAERFMCPEVLFQPSVIGKESSG 264
Query: 541 IHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRM 660
IHE NSI+KC VD R+D+Y N +M+GGTTM GI +RM
Sbjct: 265 IHEATRNSILKCPVDTRRDMYGNILMTGGTTMLHGIKERM 304
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 244 bits (596), Expect = 5e-65
Identities = 107/220 (48%), Positives = 156/220 (70%)
Frame = +1
Query: 1 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVL 180
L++ P + +LLT+ PLNP NREKM + MFE +N +++ IQAVL+LYA G TG+V+
Sbjct: 95 LKINPSDCKILLTDPPLNPSKNREKMIETMFEKYNFAGVFIQIQAVLTLYAQGLLTGLVI 154
Query: 181 DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 360
DSGDGV+H VP+ +GY+ PH R+++AGR +T YL+ +L+ RGY+ TA+ E VR+IK
Sbjct: 155 DSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHITAYLVDLLSRRGYAMNKTADFETVREIK 214
Query: 361 EKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCG 540
EKLCY++ D+++E +T L K+Y LPDG+VI +G ERF+ PEALF P + +E G
Sbjct: 215 EKLCYISYDYKRESQLGLETTILVKNYTLPDGRVIKVGTERFQAPEALFTPELIDVEGDG 274
Query: 541 IHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRM 660
+ + V+ I + D+D R LY + V+SGG+TMYPG+ R+
Sbjct: 275 MADMVFRCIQEMDIDNRMMLYQHIVLSGGSTMYPGLPSRL 314
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 145 bits (352), Expect = 2e-35
Identities = 94/262 (35%), Positives = 142/262 (54%), Gaps = 42/262 (16%)
Frame = +1
Query: 1 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVL 180
L + P EHP+LL E PLN + REK ++MFE + PA+++A VL+ +A+GR T +V+
Sbjct: 118 LMIDPTEHPMLLAEPPLNTQQQREKAAELMFEKYKVPALFMAKNPVLTSFATGRATSLVV 177
Query: 181 DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG------YSF------- 321
D G G + P+++GY L A++ L G LTD L+K L +G YSF
Sbjct: 178 DCGGGSTTISPVHDGYVLQKAVVSSPLGGEFLTDCLLKSLESKGIKIRPRYSFKRKEVRA 237
Query: 322 ------------TTTA-----EREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELP 450
TT + +R IV DIK+ +C V + + + T+ SYELP
Sbjct: 238 GEFQVEDVDIPDTTESYKLFCQRMIVGDIKDSICRVPDTPYDDKSYSNIPTT---SYELP 294
Query: 451 DGQVITIGNERFRCPEALFQPSFL----GMESC--------GIHETVYNSIMKCDVDIRK 594
DGQ + IG +RF+ P+ +F PS + GME G+ V SI KCDVDIR+
Sbjct: 295 DGQTLEIGADRFKVPDVMFNPSIVQTIPGMEKYAEMIPSVRGLPHMVMESINKCDVDIRR 354
Query: 595 DLYANTVMSGGTTMYPGIADRM 660
+LY++ +++GGT+ + +R+
Sbjct: 355 ELYSSILLAGGTSSMQQLKERL 376
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 145 bits (352), Expect = 2e-35
Identities = 81/232 (34%), Positives = 122/232 (52%), Gaps = 12/232 (5%)
Frame = +1
Query: 1 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRT----- 165
LR PE+H LLTE+PL P +RE +I+FETFN P +Y+A+ +VL+L A T
Sbjct: 113 LRCDPEDHYFLLTESPLTPPESREYTGEILFETFNVPGLYIAVNSVLALAAGYTTSKCEM 172
Query: 166 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREI 345
TG+V+D GDG +H VP+ EGY + I + +AG+D+T ++ +++ ERG + ++
Sbjct: 173 TGVVVDVGDGATHVVPVAEGYVIGSCIKSIPIAGKDVTLFIQQLMRERGENIPPEDSFDV 232
Query: 346 VRDIKEKLCYVALD----FEQEMATAAASTSLEKSYELPDGQVIT--IGNERFRCPEALF 507
R +KE CY D F + A K + G T +G ERF PE F
Sbjct: 233 ARKVKEMYCYTCSDIVKEFNKHDKEPAKYIKQWKGVKPKTGAPYTCDVGYERFLGPEVFF 292
Query: 508 QPSFLGME-SCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRM 660
P + + + + I +D R+ LY N V+SGG+TM+ R+
Sbjct: 293 NPEIYSNDFTTTLPAVIDKCIQSAPIDTRRALYKNIVLSGGSTMFKDFGRRL 344
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 135 bits (326), Expect = 3e-32
Identities = 83/213 (38%), Positives = 109/213 (51%)
Frame = +1
Query: 19 EHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 198
E +L T+ PKA RE++ Q+MFETFN Y + QAVLSLYA GR +G +D G G
Sbjct: 88 EGNILFTDPLCTPKAIREQLVQLMFETFNVSGFYASEQAVLSLYAVGRISGCTVDIGHGK 147
Query: 199 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 378
P+ EG A R +L G +LT + L + S + V +KE+
Sbjct: 148 IDIAPVLEGAVQHIASKRFELGGTELTKLFAQELGKTNPSMNLSMSD--VEKLKEQYANC 205
Query: 379 ALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVY 558
A E E+A + + LPDGQVI+IG ER+ EALFQPS LG+E GI E +
Sbjct: 206 A---EDEIAYKKTQNCEIEQHTLPDGQVISIGRERYSVGEALFQPSILGLEEHGIVEQLV 262
Query: 559 NSIMKCDVDIRKDLYANTVMSGGTTMYPGIADR 657
I + + L NTV+ GGTT G R
Sbjct: 263 RIISTVSSENHRQLLENTVLCGGTTSMTGFESR 295
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 100 bits (240), Expect = 7e-22
Identities = 68/208 (32%), Positives = 107/208 (51%), Gaps = 7/208 (3%)
Frame = +1
Query: 58 KANREKMTQIMFETF---NSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY 228
KA+R ++ +F N PA+ QAVL+LYA+ RT+GIV++ G V +PI G
Sbjct: 212 KASRRQLKTAIFNVLFDMNVPAVCAVNQAVLALYAARRTSGIVVNIGFQVITILPILHGK 271
Query: 229 ALPH-AILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMA 405
+ + + LT +L + + E SF + VR +KEKLCYVALD++ E+
Sbjct: 272 VMRQVGVEVIGFGALKLTGFLKEKMQENNISFQSL---YTVRTLKEKLCYVALDYKAEL- 327
Query: 406 TAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCD-V 582
S + S E+ T+ ERF+ E LFQP GM + +H+ V + CD
Sbjct: 328 ----SKDTQASVEVSGEGWFTLSKERFQTGEILFQPRLAGMRAMSLHQAVSLCMDHCDAA 383
Query: 583 DIRKD--LYANTVMSGGTTMYPGIADRM 660
+ D + V++GG+ PG+++R+
Sbjct: 384 GLTGDDSWFKTVVLTGGSACLPGLSERL 411
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 99.1 bits (236), Expect = 2e-21
Identities = 60/169 (35%), Positives = 94/169 (55%), Gaps = 11/169 (6%)
Frame = +1
Query: 1 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAI-QAVLSLYASGRTT--- 168
L +AP +LLTEAPL+ + + +++FE F ++Y+A Q+++ LY + R
Sbjct: 88 LHIAPSSSSLLLTEAPLSIPSVQRTTDELVFEDFGFSSLYIAHPQSLVHLYEASRQPDSI 147
Query: 169 ------GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 330
+V+D G +H VP+ + L HAI R+DL G+ T+YL ++++ R S
Sbjct: 148 LSKTQCSLVVDCGFSFTHAVPVLHNFTLNHAIKRIDLGGKAFTNYLKELVSYR--SINVM 205
Query: 331 AEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKS-YELPDGQVITIG 474
E +V D KEKLC+V+LD +++ A +L KS Y LPDG T G
Sbjct: 206 DETFLVDDAKEKLCFVSLDLLRDLRLARNGNTLIKSTYVLPDGVTHTKG 254
Score = 60.9 bits (141), Expect = 7e-10
Identities = 32/111 (28%), Positives = 59/111 (53%)
Frame = +1
Query: 328 TAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALF 507
T + V+D + +++L E+E K ++ + I + NERF PE LF
Sbjct: 250 THTKGYVKDPQAAKRFLSLS-EKESVVVMDKVGERKKADMNKNE-IDLTNERFLVPETLF 307
Query: 508 QPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRM 660
QP+ LGM G+ E + +I C ++ LY + +++GG+T++P + +R+
Sbjct: 308 QPADLGMNQAGLAECIVRAINSCHSYLQPVLYQSIILTGGSTLFPQLKERL 358
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 82.6 bits (195), Expect = 2e-16
Identities = 59/171 (34%), Positives = 88/171 (51%), Gaps = 4/171 (2%)
Frame = +1
Query: 58 KANREKMTQIMFETF---NSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY 228
KA+R ++ +F N PA+ QAVL+LYA+ RT+GIV++ G V +PI G
Sbjct: 212 KASRRQLKTAIFNVLFDMNVPAVCAVNQAVLALYAARRTSGIVVNIGFQVITILPILHGK 271
Query: 229 ALPH-AILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMA 405
+ + + LT +L + + E SF + VR +KEKLCYVALD++ E+
Sbjct: 272 VMRQVGVEVIGFGALKLTGFLKEKMQENNISFQSL---YTVRTLKEKLCYVALDYKAEL- 327
Query: 406 TAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVY 558
S + S E+ T+ ERF+ E LFQP G+ +H+ VY
Sbjct: 328 ----SKDTQASVEVSGEGWFTLSKERFQTGEILFQPRLAGII---VHKLVY 371
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 79.4 bits (187), Expect = 2e-15
Identities = 41/133 (30%), Positives = 72/133 (54%), Gaps = 5/133 (3%)
Frame = +1
Query: 19 EHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLS-----LYASGRTTGIVLD 183
+HP+L+TE NP +R KM +++FET+ PA+ + A S L+ + GIVL
Sbjct: 116 DHPILITECACNPVQSRSKMAELLFETYGVPAVAFGVDAAFSYKYNQLHGICKKDGIVLC 175
Query: 184 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKE 363
G +H++P +G + R ++ G +TDYL ++L+ + ++ E D+K
Sbjct: 176 PGFTTTHSIPFVDGEPIYKGSSRTNIGGYHVTDYLKQLLSLKYPFHSSRFTWEKAEDLKL 235
Query: 364 KLCYVALDFEQEM 402
+ CY+A D+ E+
Sbjct: 236 EHCYIAPDYASEI 248
Score = 56.8 bits (131), Expect = 1e-08
Identities = 35/115 (30%), Positives = 62/115 (53%), Gaps = 6/115 (5%)
Frame = +1
Query: 334 EREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELP---DGQVITIGNERFRCPEAL 504
E E+ R + +L + F Q++ + TS E P + I IG ERFRCPE L
Sbjct: 544 EAELAR-LSSRLQEIDPTFVQKVEGELSQTSGEVPRVRPLTEEDYKIVIGIERFRCPEIL 602
Query: 505 FQPSFLGMESCGIHETVYNSIMKC---DVDIRKDLYANTVMSGGTTMYPGIADRM 660
F P+ +G++ G+ E SI + + ++ + L ++ +M+GG ++ PG+ +R+
Sbjct: 603 FHPNLIGIDQVGLDEMAGTSIRRLPHDEKELEERLTSSILMTGGCSLLPGMNERL 657
>At5g43500.2 68418.m05318 expressed protein
Length = 584
Score = 35.5 bits (78), Expect = 0.032
Identities = 21/92 (22%), Positives = 47/92 (51%)
Frame = +1
Query: 22 HPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 201
H V++ + + +E +T ++ E + + A+ V + + +++ +G TT +++ G S
Sbjct: 238 HAVIVVPETFDTREIKEMLTIVLGELYFNSAV-VHQEGLSAVFGNGLTTACIVNIGAQTS 296
Query: 202 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKI 297
V + +G +LP+ L G D+ L+ I
Sbjct: 297 TVVCVEDGVSLPNTEKILPFGGEDICRCLLWI 328
>At5g43500.1 68418.m05319 expressed protein
Length = 596
Score = 35.5 bits (78), Expect = 0.032
Identities = 21/92 (22%), Positives = 47/92 (51%)
Frame = +1
Query: 22 HPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 201
H V++ + + +E +T ++ E + + A+ V + + +++ +G TT +++ G S
Sbjct: 250 HAVIVVPETFDTREIKEMLTIVLGELYFNSAV-VHQEGLSAVFGNGLTTACIVNIGAQTS 308
Query: 202 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKI 297
V + +G +LP+ L G D+ L+ I
Sbjct: 309 TVVCVEDGVSLPNTEKILPFGGEDICRCLLWI 340
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 33.9 bits (74), Expect = 0.096
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +1
Query: 1 LRVAPEEHPVLLTEAPLNPKANREK 75
L + P EHP+LL E PLN + REK
Sbjct: 112 LMIDPTEHPMLLAEPPLNSQQQREK 136
>At2g36910.1 68415.m04527 multidrug resistance P-glycoprotein (PGP1)
identical to P-glycoprotein GI:3849833 from [Arabidopsis
thaliana]; homologous to mammalian mdr gene,contains
ATP-binding cassette; related to multi drug resistance
proteins
Length = 1286
Score = 29.5 bits (63), Expect = 2.1
Identities = 29/109 (26%), Positives = 48/109 (44%), Gaps = 2/109 (1%)
Frame = +1
Query: 154 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTA 333
+G+T +V SG G S V + E + P++ L L G+DL ++ L ++ +
Sbjct: 395 AGKTIALVGSSGSGKSTVVSLIERFYDPNSGQVL-LDGQDLKTLKLRWLRQQ-IGLVSQE 452
Query: 334 EREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSY--ELPDGQVITIG 474
IKE + D +Q AA + S+ +LPDG +G
Sbjct: 453 PALFATSIKENILLGRPDADQVEIEEAARVANAHSFIIKLPDGFDTQVG 501
>At3g28860.1 68416.m03602 multidrug resistance P-glycoprotein,
putative similar to mdr-like P-glycoprotein GI:3849833
from [Arabidopsis thaliana]; contains Pfam profiles
PF00005: ABC transporter and PF00664: ABC transporter
transmembrane region; identical to cDNA MDR-like
p-glycoprotein (At3g28860) GI:24324261
Length = 1252
Score = 29.1 bits (62), Expect = 2.7
Identities = 38/158 (24%), Positives = 66/158 (41%), Gaps = 6/158 (3%)
Frame = +1
Query: 19 EHPVLLTEAPLNPKANREKMTQIMFE--TFNSPAM--YVAIQAVLSLYASGRTTGIVLDS 186
+ P ++ + PL+ K + I F+ TF+ P+ + + + SG+T +V S
Sbjct: 344 QRPTIIQD-PLDGKCLDQVHGNIEFKDVTFSYPSRPDVMIFRNFNIFFPSGKTVAVVGGS 402
Query: 187 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEK 366
G G S V + E + P++ ++ L G ++ +K L E+ I E
Sbjct: 403 GSGKSTVVSLIERFYDPNS-GQILLDGVEIKTLQLKFLREQ-IGLVNQEPALFATTILEN 460
Query: 367 LCYVALDFEQEMATAAASTSLEKSY--ELPDGQVITIG 474
+ Y D AAAS + S+ LP G +G
Sbjct: 461 ILYGKPDATMVEVEAAASAANAHSFITLLPKGYDTQVG 498
>At3g24130.1 68416.m03030 pectinesterase family protein contains
Pfam profile: PF01095 Pectinesterase
Length = 335
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -1
Query: 336 LSGGGERVTPLGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGY 208
L G G+R+T + D H V Q T ++ V +S+TF + Y
Sbjct: 86 LVGAGKRLTRVEWDDHYSVAQSPTFSTLADNTVVKSITFANSY 128
>At1g65780.1 68414.m07465 tRNA-splicing endonuclease positive
effector-related contains similarity to SEN1, a positive
effector of tRNA-splicing endonuclease [Saccharomyces
cerevisiae] gi|172574|gb|AAB63976
Length = 1065
Score = 29.1 bits (62), Expect = 2.7
Identities = 11/32 (34%), Positives = 22/32 (68%)
Frame = +1
Query: 337 REIVRDIKEKLCYVALDFEQEMATAAASTSLE 432
R +++D KE+ C+ + ++ +A A AST++E
Sbjct: 826 RNLIQDAKERGCFHSAGEDESLAQAIASTNIE 857
>At5g67080.1 68418.m08458 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 344
Score = 28.7 bits (61), Expect = 3.6
Identities = 29/126 (23%), Positives = 51/126 (40%), Gaps = 1/126 (0%)
Frame = +1
Query: 124 AIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD-LTDYLMKIL 300
A+ V+ SG+T + + + +S + I G +P L GRD L+ +K
Sbjct: 195 ALGCVVVEMFSGKTAWSLKEGSNFMSLLLRIGVGDEVPMIPEELSEQGRDFLSKCFVKDP 254
Query: 301 TERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNE 480
+R + + D+ + DF M T STS +E PD ++ G++
Sbjct: 255 KKRWTAEMLLNHPFVTVDVDHDVLVKEEDFVVNMKTEDVSTSPRCPFEFPDWVSVSSGSQ 314
Query: 481 RFRCPE 498
P+
Sbjct: 315 TIDSPD 320
>At5g04940.2 68418.m00523 SET domain-containing protein (SUVH1)
contains Pfam profiles PF00856: SET domain, PF05033:
Pre-SET motif, PF02182: YDG/SRA domain; identical to
cDNA SUVH1 (SUVH1) GI:13517742
Length = 670
Score = 28.7 bits (61), Expect = 3.6
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +3
Query: 204 HRTHLRRLRSAPRHPPSGLGWSRLDRLPHEDPHREGLLV 320
H T +L AP PP+ W+ + + P R+GL++
Sbjct: 348 HNTFKYKLVRAPGQPPAFASWTAIQKWKTGVPSRQGLIL 386
>At5g04940.1 68418.m00522 SET domain-containing protein (SUVH1)
contains Pfam profiles PF00856: SET domain, PF05033:
Pre-SET motif, PF02182: YDG/SRA domain; identical to
cDNA SUVH1 (SUVH1) GI:13517742
Length = 670
Score = 28.7 bits (61), Expect = 3.6
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +3
Query: 204 HRTHLRRLRSAPRHPPSGLGWSRLDRLPHEDPHREGLLV 320
H T +L AP PP+ W+ + + P R+GL++
Sbjct: 348 HNTFKYKLVRAPGQPPAFASWTAIQKWKTGVPSRQGLIL 386
>At2g19780.1 68415.m02311 leucine-rich repeat family protein /
extensin family protein contains leucine rich-repeat
(LRR) domains Pfam:PF00560, INTERPRO:IPR001611; similar
to leucine-rich repeat/extensin 1 (GI:13809918)
[Arabidopsis thaliana]; contains similarity to disease
resistance protein [Lycopersicon esculentum]
gi|3894383|gb|AAC78591
Length = 402
Score = 28.7 bits (61), Expect = 3.6
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -1
Query: 81 GHLLPVGLGVEGGFGEQHGVLLGG 10
G+ + VG+G+ GG G+ GV +GG
Sbjct: 28 GYSIGVGVGIGGGDGDDGGVWIGG 51
>At4g01900.1 68417.m00250 P II nitrogen sensing protein (GLB I)
identical to P II nitrogen sensing protein GLB I
(GI:7268574) [Arabidopsis thaliana]; similar to nitrogen
regulatory protein P-II (PII signal transducing protein)
(SP:O30794) {Nostoc punctiforme}
Length = 196
Score = 27.9 bits (59), Expect = 6.3
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Frame = -2
Query: 224 PS*MGTVWETPSPESSTIPVVRPEAYSESTAWMATY-MAGELKVSNMIWVIFSLLALGLR 48
PS + V ++PS S +PVV + S+ Y + ++ + V +LL +G+R
Sbjct: 40 PSCLDLVTKSPSNNSRVLPVVSAQISSDYIPDSKFYKVEAIVRPWRIQQVSSALLKIGIR 99
Query: 47 GASVSST---GCSSGAT 6
G +VS G G+T
Sbjct: 100 GVTVSDVRGFGAQGGST 116
>At2g46430.1 68415.m05778 cyclic nucleotide-regulated ion channel /
cyclic nucleotide-gated channel (CNGC3) identical to
cyclic nucleotide and calmodulin-regulated ion channel
GI:4581201 from [Arabidopsis thaliana]
Length = 706
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/54 (25%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Frame = -2
Query: 656 LSAIPGYMVVPPDMTVLA--YRSLRMSTSHFMMELYTVSWMPHDSIPRKEGWKR 501
L+ + G+++ D+ +A YR L M Y+V W + + WKR
Sbjct: 571 LTEVEGFLLSADDLKFVATQYRRLHSKQLRHMFRFYSVQWQTWAACFIQAAWKR 624
>At4g30520.1 68417.m04333 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 648
Score = 27.5 bits (58), Expect = 8.4
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = -2
Query: 578 SHFMMELYTVSWMPHDSIPRKEGWKRASGQRNLSLPMVIT*PSGS 444
S F MEL +S H ++ R G+ SG+R L P + P+GS
Sbjct: 343 SQFRMELEMISLAVHKNLLRLIGYCATSGERLLVYPYM---PNGS 384
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,526,975
Number of Sequences: 28952
Number of extensions: 252656
Number of successful extensions: 937
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 875
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 922
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1383534864
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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