Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0466
         (596 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    25   0.37 
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    25   0.37 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   3.4  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   4.5  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    22   4.5  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   4.5  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    21   7.9  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    21   7.9  

>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 25.4 bits (53), Expect = 0.37
 Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = -3

Query: 447 MELRF-YFINEFIDIKELLTIPLETRFESTNKTSKKQW 337
           MEL++ +++N      +LL   LET  + TN+TS + W
Sbjct: 194 MELQYCHYLNILRVRYQLLNEYLETLVQETNRTSVEGW 231


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 25.4 bits (53), Expect = 0.37
 Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = -3

Query: 447 MELRF-YFINEFIDIKELLTIPLETRFESTNKTSKKQW 337
           MEL++ +++N      +LL   LET  + TN+TS + W
Sbjct: 194 MELQYCHYLNILRVRYQLLNEYLETLVQETNRTSVEGW 231


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -2

Query: 139  GRIWGRPMRKQNNLCRCQMFTL 74
            G IW   +    NLC C+ + L
Sbjct: 2160 GMIWALDLDDFKNLCGCEEYPL 2181


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +1

Query: 358 ISRLETSFQRNSKQFFNID 414
           I  L T  Q  +K FFN+D
Sbjct: 377 IRLLNTKLQFTAKDFFNLD 395


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +1

Query: 358 ISRLETSFQRNSKQFFNID 414
           I  L T  Q  +K FFN+D
Sbjct: 333 IRLLNTKLQFTAKDFFNLD 351


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -1

Query: 287 GDGNHSPSGGP 255
           G GN+ P GGP
Sbjct: 530 GSGNNQPPGGP 540


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
 Frame = -1

Query: 464 LSLVLQWNCDFILLMNLSILKNCLLFRWKLV-----SSRLIRRVRNNGTVGSGLAL 312
           L+ VL  N    L + LSI+KNCL + + L      S++L R  +   TV  G+ +
Sbjct: 261 LNSVLFQNVYKPLPIVLSIVKNCLSYCFNLYHLASKSNQLSREAKVTKTVLLGVKI 316


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
 Frame = -1

Query: 464 LSLVLQWNCDFILLMNLSILKNCLLFRWKLV-----SSRLIRRVRNNGTVGSGLAL 312
           L+ VL  N    L + LSI+KNCL + + L      S++L R  +   TV  G+ +
Sbjct: 261 LNSVLFQNVYKPLPIVLSIVKNCLSYCFNLYHLASKSNQLSREAKVTKTVLLGVKI 316


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,641
Number of Sequences: 336
Number of extensions: 3319
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)