Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0466
         (596 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT025921-1|ABG02165.1|  158|Drosophila melanogaster IP11020p pro...    29   4.8  
AY070680-1|AAL48151.1|  183|Drosophila melanogaster RH17496p pro...    29   4.8  
AE014298-2846|AAN09490.1|  183|Drosophila melanogaster CG12203-P...    29   4.8  

>BT025921-1|ABG02165.1|  158|Drosophila melanogaster IP11020p
           protein.
          Length = 158

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
 Frame = -1

Query: 278 NHSP-SGGPYARLPTRAIKKRILIHVRLDRQTVGGSTWMRKCDNRNLWQDLGEAYAKAKQ 102
           N SP SG P   +  R ++  I     +   T   +TW  + DNR  W++    +A +  
Sbjct: 42  NLSPISGVPEEHIRERRVRIHIPPKNAMQSGTDNVNTWQIEFDNRERWENPLMGWASSGD 101

Query: 101 SLSMSNV 81
            LS  NV
Sbjct: 102 PLSNMNV 108


>AY070680-1|AAL48151.1|  183|Drosophila melanogaster RH17496p
           protein.
          Length = 183

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
 Frame = -1

Query: 278 NHSP-SGGPYARLPTRAIKKRILIHVRLDRQTVGGSTWMRKCDNRNLWQDLGEAYAKAKQ 102
           N SP SG P   +  R ++  I     +   T   +TW  + DNR  W++    +A +  
Sbjct: 67  NLSPISGVPEEHIRERRVRIHIPPKNAMQSGTDNVNTWQIEFDNRERWENPLMGWASSGD 126

Query: 101 SLSMSNV 81
            LS  NV
Sbjct: 127 PLSNMNV 133


>AE014298-2846|AAN09490.1|  183|Drosophila melanogaster CG12203-PA
           protein.
          Length = 183

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
 Frame = -1

Query: 278 NHSP-SGGPYARLPTRAIKKRILIHVRLDRQTVGGSTWMRKCDNRNLWQDLGEAYAKAKQ 102
           N SP SG P   +  R ++  I     +   T   +TW  + DNR  W++    +A +  
Sbjct: 67  NLSPISGVPEEHIRERRVRIHIPPKNAMQSGTDNVNTWQIEFDNRERWENPLMGWASSGD 126

Query: 101 SLSMSNV 81
            LS  NV
Sbjct: 127 PLSNMNV 133


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,860,713
Number of Sequences: 53049
Number of extensions: 603279
Number of successful extensions: 1704
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1624
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1704
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2420893683
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)