Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0464
(655 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5RH26 Cluster: ATP synthase gamma chain; n=8; Bilateri... 226 3e-58
UniRef50_UPI0000E7F7A6 Cluster: PREDICTED: similar to Atp5c1-pro... 208 7e-53
UniRef50_Q5MCG2 Cluster: Mitochondrial ATP synthase gamma subuni... 165 1e-39
UniRef50_Q4P473 Cluster: ATP synthase gamma chain; n=7; Dikarya|... 138 1e-31
UniRef50_Q5MCG3 Cluster: Mitochondrial ATP synthase gamma subuni... 135 8e-31
UniRef50_O74754 Cluster: ATP synthase gamma chain, mitochondrial... 128 9e-29
UniRef50_Q5BGS8 Cluster: ATP synthase gamma chain; n=14; Pezizom... 126 4e-28
UniRef50_P38077 Cluster: ATP synthase gamma chain, mitochondrial... 122 8e-27
UniRef50_Q5ENU5 Cluster: ATP synthase gamma chain; n=1; Guillard... 114 2e-24
UniRef50_Q4N9B3 Cluster: ATP synthase F1, gamma chain, putative;... 112 8e-24
UniRef50_O21267 Cluster: ATP synthase gamma chain; n=1; Reclinom... 110 2e-23
UniRef50_Q7RKU7 Cluster: ATP synthase gamma chain; n=5; Plasmodi... 101 2e-20
UniRef50_A4RRG5 Cluster: ATP synthase gamma chain; n=1; Ostreoco... 100 3e-20
UniRef50_Q96250 Cluster: ATP synthase gamma chain, mitochondrial... 95 2e-18
UniRef50_Q54DF1 Cluster: ATP synthase gamma chain; n=1; Dictyost... 91 2e-17
UniRef50_Q4LDE7 Cluster: ATP synthase gamma chain, mitochondrial... 88 2e-16
UniRef50_Q74GY1 Cluster: ATP synthase gamma chain; n=11; Deltapr... 86 6e-16
UniRef50_A4EMZ6 Cluster: ATP synthase gamma chain; n=1; Roseobac... 83 7e-15
UniRef50_Q82XP9 Cluster: ATP synthase gamma chain; n=123; Proteo... 82 1e-14
UniRef50_Q24MP0 Cluster: ATP synthase gamma chain; n=4; Clostrid... 81 2e-14
UniRef50_Q1IIG7 Cluster: ATP synthase gamma chain; n=1; Acidobac... 81 2e-14
UniRef50_Q7VA64 Cluster: ATP synthase gamma chain; n=19; cellula... 78 2e-13
UniRef50_Q57B87 Cluster: ATP synthase gamma chain; n=42; Proteob... 78 2e-13
UniRef50_Q2S431 Cluster: ATP synthase gamma chain; n=1; Saliniba... 77 5e-13
UniRef50_A0EFI5 Cluster: ATP synthase gamma chain; n=6; Oligohym... 77 5e-13
UniRef50_Q5NQZ0 Cluster: ATP synthase gamma chain; n=7; Alphapro... 76 6e-13
UniRef50_Q7VU45 Cluster: ATP synthase gamma chain; n=29; Proteob... 76 9e-13
UniRef50_A2Z5X7 Cluster: ATP synthase gamma chain; n=3; Oryza sa... 66 3e-12
UniRef50_A1ZKB6 Cluster: ATP synthase gamma chain; n=6; cellular... 74 3e-12
UniRef50_Q8KAW9 Cluster: ATP synthase gamma chain; n=11; Bacteri... 73 6e-12
UniRef50_Q2AH77 Cluster: ATP synthase gamma chain; n=1; Halother... 73 8e-12
UniRef50_Q7U8W4 Cluster: ATP synthase gamma chain; n=22; Cyanoba... 73 8e-12
UniRef50_Q6MGM6 Cluster: ATP synthase gamma chain; n=1; Bdellovi... 73 8e-12
UniRef50_A3U635 Cluster: ATP synthase gamma chain; n=13; Bactero... 72 1e-11
UniRef50_Q5HBD0 Cluster: ATP synthase gamma chain; n=5; canis gr... 71 2e-11
UniRef50_A3EQ50 Cluster: ATP synthase gamma chain; n=1; Leptospi... 70 4e-11
UniRef50_Q6G1W8 Cluster: ATP synthase gamma chain; n=44; Bacteri... 70 6e-11
UniRef50_P0C1M0 Cluster: ATP synthase subunit gamma, chloroplast... 69 1e-10
UniRef50_A6G263 Cluster: ATP synthase gamma chain; n=1; Plesiocy... 68 2e-10
UniRef50_Q92G87 Cluster: ATP synthase gamma chain; n=10; Rickett... 67 3e-10
UniRef50_Q5PAR4 Cluster: ATP synthase gamma chain; n=2; Anaplasm... 66 7e-10
UniRef50_Q1VL71 Cluster: Putative uncharacterized protein; n=1; ... 66 7e-10
UniRef50_Q9L6B6 Cluster: ATP synthase gamma chain; n=45; Gammapr... 66 9e-10
UniRef50_A7QZP5 Cluster: Chromosome chr10 scaffold_282, whole ge... 65 2e-09
UniRef50_Q67TB8 Cluster: ATP synthase gamma chain; n=4; Firmicut... 65 2e-09
UniRef50_Q8XID3 Cluster: ATP synthase gamma chain; n=12; Clostri... 64 2e-09
UniRef50_Q1AVH8 Cluster: ATP synthase gamma chain; n=1; Rubrobac... 63 5e-09
UniRef50_A0LLF9 Cluster: ATP synthase gamma chain; n=1; Syntroph... 63 5e-09
UniRef50_Q1FG24 Cluster: ATP synthase gamma chain; n=1; Clostrid... 63 6e-09
UniRef50_Q8RC16 Cluster: ATP synthase gamma chain; n=1; Thermoan... 62 9e-09
UniRef50_Q5ENU6 Cluster: ATP synthase gamma chain; n=1; Isochrys... 62 1e-08
UniRef50_Q01909 Cluster: ATP synthase gamma chain 2, chloroplast... 62 1e-08
UniRef50_Q1CX34 Cluster: ATP synthase gamma chain; n=4; Bacteria... 62 1e-08
UniRef50_Q8A9U6 Cluster: ATP synthase gamma chain; n=8; Bacteroi... 62 1e-08
UniRef50_A1IFD5 Cluster: ATP synthase gamma chain; n=2; Deltapro... 61 2e-08
UniRef50_Q8RGE1 Cluster: ATP synthase gamma chain; n=5; Fusobact... 61 2e-08
UniRef50_Q7VQV7 Cluster: ATP synthase gamma chain; n=36; Gammapr... 61 3e-08
UniRef50_Q5GRT1 Cluster: ATP synthase gamma chain; n=3; Wolbachi... 60 3e-08
UniRef50_Q2GDH8 Cluster: ATP synthase F1, gamma subunit; n=1; Ne... 60 6e-08
UniRef50_P37810 Cluster: ATP synthase gamma chain; n=61; Firmicu... 60 6e-08
UniRef50_A5UQN4 Cluster: ATP synthase gamma chain; n=5; Chlorofl... 59 8e-08
UniRef50_Q6AQ11 Cluster: ATP synthase gamma chain; n=4; Deltapro... 59 1e-07
UniRef50_O67829 Cluster: ATP synthase gamma chain; n=1; Aquifex ... 59 1e-07
UniRef50_Q6KI81 Cluster: ATP synthase gamma chain; n=1; Mycoplas... 58 2e-07
UniRef50_Q5NIK4 Cluster: ATP synthase gamma chain; n=10; Francis... 57 3e-07
UniRef50_Q3ZZT8 Cluster: ATP synthase gamma chain; n=3; Dehaloco... 57 4e-07
UniRef50_A5KSC8 Cluster: ATP synthase gamma chain; n=1; candidat... 57 4e-07
UniRef50_Q2LQZ6 Cluster: ATP synthase gamma chain; n=1; Syntroph... 56 6e-07
UniRef50_Q1KT14 Cluster: ATP synthase gamma chain; n=1; Pasteuri... 56 6e-07
UniRef50_Q6LLG7 Cluster: ATP synthase gamma chain 1; n=10; Gamma... 56 6e-07
UniRef50_P50005 Cluster: ATP synthase gamma chain, sodium ion sp... 56 7e-07
UniRef50_Q1MP34 Cluster: ATP synthase gamma chain; n=1; Lawsonia... 55 1e-06
UniRef50_Q50330 Cluster: ATP synthase gamma chain; n=4; Mycoplas... 55 2e-06
UniRef50_A5KNF5 Cluster: ATP synthase gamma chain; n=1; Ruminoco... 54 2e-06
UniRef50_A7HJV8 Cluster: ATP synthase F1, gamma subunit; n=2; Th... 54 4e-06
UniRef50_UPI00015BD26E Cluster: UPI00015BD26E related cluster; n... 53 5e-06
UniRef50_A7CR46 Cluster: ATP synthase F1, gamma subunit; n=1; Op... 53 5e-06
UniRef50_Q72SY0 Cluster: ATP synthase gamma chain; n=4; Leptospi... 53 5e-06
UniRef50_P0ABA9 Cluster: ATP synthase gamma chain; n=59; Bacteri... 53 7e-06
UniRef50_Q5ENU7 Cluster: ATP synthase gamma chain; n=1; Heteroca... 52 1e-05
UniRef50_Q6MAK6 Cluster: ATP synthase gamma chain; n=1; Candidat... 52 1e-05
UniRef50_P33257 Cluster: ATP synthase gamma chain; n=1; Mycoplas... 52 1e-05
UniRef50_A0PUK1 Cluster: ATP synthase gamma chain AtpG; n=2; Act... 51 2e-05
UniRef50_Q1Q3H1 Cluster: ATP synthase gamma chain; n=1; Candidat... 50 5e-05
UniRef50_Q8FQ21 Cluster: ATP synthase gamma chain; n=24; Actinom... 50 5e-05
UniRef50_P45824 Cluster: ATP synthase gamma chain; n=12; Actinob... 50 6e-05
UniRef50_A3DIM8 Cluster: ATP synthase gamma chain; n=2; Clostrid... 49 9e-05
UniRef50_Q7UFB6 Cluster: ATP synthase gamma chain; n=3; Planctom... 49 1e-04
UniRef50_A6BF72 Cluster: ATP synthase gamma chain; n=4; Clostrid... 48 1e-04
UniRef50_A5IYE4 Cluster: ATP synthase gamma chain; n=1; Mycoplas... 48 1e-04
UniRef50_P56082 Cluster: ATP synthase gamma chain; n=27; Epsilon... 48 1e-04
UniRef50_Q9X1U6 Cluster: ATP synthase gamma chain; n=3; Thermoto... 48 2e-04
UniRef50_Q6A8C6 Cluster: ATP synthase gamma chain; n=10; Actinom... 48 3e-04
UniRef50_Q8EWY9 Cluster: ATP synthase gamma chain; n=1; Mycoplas... 47 3e-04
UniRef50_A5ZMV2 Cluster: ATP synthase gamma chain; n=1; Ruminoco... 47 5e-04
UniRef50_Q2IA50 Cluster: ATP synthase gamma chain; n=1; Karlodin... 47 5e-04
UniRef50_Q9ZJ02 Cluster: ATP synthase gamma chain; n=48; Bacilli... 47 5e-04
UniRef50_A6DUD9 Cluster: ATP synthase gamma chain; n=1; Lentisph... 46 8e-04
UniRef50_A4EBH2 Cluster: ATP synthase gamma chain; n=1; Collinse... 46 8e-04
UniRef50_Q00GM7 Cluster: Plastid ATP synthase gamma subunit prot... 45 0.002
UniRef50_Q4A603 Cluster: ATP synthase gamma chain; n=1; Mycoplas... 43 0.006
UniRef50_Q9RQ77 Cluster: ATP synthase gamma chain; n=2; Buchnera... 42 0.017
UniRef50_A4XKX1 Cluster: ATP synthase gamma chain; n=1; Caldicel... 41 0.023
UniRef50_A4JPV4 Cluster: ATP synthase gamma chain; n=5; Burkhold... 41 0.030
UniRef50_Q4QC06 Cluster: ATP synthase F1 subunit gamma protein, ... 41 0.030
UniRef50_Q8G7B2 Cluster: ATP synthase gamma chain; n=5; Bifidoba... 40 0.039
UniRef50_Q9PR14 Cluster: ATP synthase gamma chain; n=1; Ureaplas... 38 0.16
UniRef50_A6V407 Cluster: Bacteriophage lambda tail assembly I; n... 37 0.49
UniRef50_Q603U1 Cluster: ATP synthase F1, gamma subunit; n=1; Me... 36 1.1
UniRef50_A6U5S6 Cluster: Peptidoglycan-binding domain 1 protein;... 36 1.1
UniRef50_UPI0001509FE9 Cluster: hypothetical protein TTHERM_0030... 35 1.5
UniRef50_UPI0000D5693F Cluster: PREDICTED: similar to CG11101-PA... 35 2.0
UniRef50_Q38Y95 Cluster: Putative N-acetylmuramoyl-L-alanine ami... 35 2.0
UniRef50_A0BK54 Cluster: Chromosome undetermined scaffold_111, w... 34 2.6
UniRef50_UPI000069ECA3 Cluster: Intercellular adhesion molecule ... 34 3.4
UniRef50_Q6CAU7 Cluster: Similarity; n=1; Yarrowia lipolytica|Re... 33 4.5
UniRef50_Q88UU2 Cluster: ATP synthase gamma chain; n=13; Lactoba... 33 4.5
UniRef50_UPI000051A317 Cluster: PREDICTED: similar to Myb-intera... 33 6.0
UniRef50_A6E6T9 Cluster: TonB-dependent outer membrane receptor,... 33 6.0
UniRef50_A4X7K2 Cluster: Putative uncharacterized protein precur... 33 6.0
UniRef50_A4RL12 Cluster: Putative uncharacterized protein; n=1; ... 33 6.0
UniRef50_P17739 Cluster: Outer surface protein B precursor; n=45... 33 6.0
UniRef50_UPI0000F1EB51 Cluster: PREDICTED: similar to hCG1647286... 33 7.9
UniRef50_UPI0000E46137 Cluster: PREDICTED: similar to esk kinase... 33 7.9
UniRef50_Q97LU5 Cluster: NtrC family transcriptional regulator; ... 33 7.9
UniRef50_Q7UFF0 Cluster: Putative uncharacterized protein; n=1; ... 33 7.9
UniRef50_Q0FUQ8 Cluster: Putative hydrolase; n=2; Alphaproteobac... 33 7.9
UniRef50_A5KME7 Cluster: Putative uncharacterized protein; n=1; ... 33 7.9
UniRef50_A4B7T7 Cluster: CheW protein; n=1; Alteromonas macleodi... 33 7.9
UniRef50_Q9RGY2 Cluster: ATP synthase gamma chain; n=10; Lactoba... 33 7.9
>UniRef50_Q5RH26 Cluster: ATP synthase gamma chain; n=8;
Bilateria|Rep: ATP synthase gamma chain - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 292
Score = 226 bits (553), Expect = 3e-58
Identities = 106/193 (54%), Positives = 144/193 (74%), Gaps = 2/193 (1%)
Frame = +3
Query: 81 RNMATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYERAEV 260
RNMATLK I+IRLKS+KNIQKIT+SMKMV+AAKY+RAER LK AR YG GA+ YE+AE+
Sbjct: 18 RNMATLKDITIRLKSIKNIQKITKSMKMVAAAKYSRAERSLKPARVYGTGALALYEKAEI 77
Query: 261 TPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSE-PGA-ENIKVICVGDKSRGILQ 434
PED K L + ++SDRGLCGA+H+ V+K I++ + + GA + + V+ +GDK R +L
Sbjct: 78 KAPEDKNKHLIIGVSSDRGLCGAIHSSVAKAIKSEIGKLSGAGKEVMVVNIGDKLRALLY 137
Query: 435 RLYGKHIISVANEIGRLPPTFLDASQLATAILTSGYEFGSGKIIYNKFKSVVSYAQSDLP 614
R +GKHI+ E+GR PPTF DAS +AT +L SGYEF G I+YN+F+SV+SY + P
Sbjct: 138 RTHGKHILLNCKEVGRKPPTFTDASIIATELLNSGYEFDQGSIVYNRFRSVISYKTDEKP 197
Query: 615 LYTKKSIESASKL 653
LY+ ++ S+ +
Sbjct: 198 LYSMDTVASSENM 210
>UniRef50_UPI0000E7F7A6 Cluster: PREDICTED: similar to Atp5c1-prov
protein; n=1; Gallus gallus|Rep: PREDICTED: similar to
Atp5c1-prov protein - Gallus gallus
Length = 300
Score = 208 bits (509), Expect = 7e-53
Identities = 103/185 (55%), Positives = 135/185 (72%), Gaps = 7/185 (3%)
Frame = +3
Query: 57 AVVYHQPN----RNMATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYG 224
AVV +QP RNMATLK I+ RLKS+KNIQKIT+SMKMVSAAKY RAER+LK AR YG
Sbjct: 7 AVVLYQPQWGQVRNMATLKDITRRLKSIKNIQKITKSMKMVSAAKYARAERELKPARVYG 66
Query: 225 EGAVQFYERAEVTPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIRN---RLSEPGAENIK 395
GA+ YE+AE+ PED K L + ++SDRGLCGA+HT ++K ++N LS G E +
Sbjct: 67 TGALALYEKAEIKAPEDKKKHLLIGVSSDRGLCGAIHTSIAKTLKNEITNLSNAGKE-VM 125
Query: 396 VICVGDKSRGILQRLYGKHIISVANEIGRLPPTFLDASQLATAILTSGYEFGSGKIIYNK 575
V+ VGDK RG+LQR +G + + E+GR PP+F DAS +A+ +L SGYEF G +IYN+
Sbjct: 126 VVGVGDKIRGLLQRTHGNYFLMTFKEVGRRPPSFGDASVIASELLNSGYEFDEGSVIYNR 185
Query: 576 FKSVV 590
F++ +
Sbjct: 186 FENSI 190
>UniRef50_Q5MCG2 Cluster: Mitochondrial ATP synthase gamma subunit;
n=1; Theromyzon tessulatum|Rep: Mitochondrial ATP
synthase gamma subunit - Theromyzon tessulatum (Leech)
Length = 189
Score = 165 bits (400), Expect = 1e-39
Identities = 78/167 (46%), Positives = 113/167 (67%), Gaps = 1/167 (0%)
Frame = +3
Query: 156 MKMVSAAKYTRAERDLKAARPYGEGAVQFYERAEVTPPEDDPKQLFVAMTSDRGLCGAVH 335
MKMVSAAKY++AER+L+ AR YG GA FYE+AEV E P L VAMTSDRGLCG+ H
Sbjct: 1 MKMVSAAKYSKAERELRPARIYGAGANAFYEKAEVIQDEKKPNHLIVAMTSDRGLCGSAH 60
Query: 336 TGVSKVIRNRLS-EPGAENIKVICVGDKSRGILQRLYGKHIISVANEIGRLPPTFLDASQ 512
+ + + I+ + +P ++K I +GDK+RG+L R +G+ +I +IG+ PP F DAS+
Sbjct: 61 SNIIRAIKAAVPLKPPGTSVKFIAIGDKARGMLGRFFGQDLIMHFMDIGKKPPVFDDASK 120
Query: 513 LATAILTSGYEFGSGKIIYNKFKSVVSYAQSDLPLYTKKSIESASKL 653
+A +L GYE+ G++ +N F+SVV+Y DLP+ + + A K+
Sbjct: 121 IALELLKLGYEYDYGQLYFNVFRSVVAYQTKDLPIVNEDNFTQAGKM 167
>UniRef50_Q4P473 Cluster: ATP synthase gamma chain; n=7;
Dikarya|Rep: ATP synthase gamma chain - Ustilago maydis
(Smut fungus)
Length = 312
Score = 138 bits (333), Expect = 1e-31
Identities = 71/201 (35%), Positives = 119/201 (59%), Gaps = 8/201 (3%)
Frame = +3
Query: 66 YHQPNRNMATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFY 245
+H + A L+ R+KSVKNI+KIT+SMKM+++ K +A+R + AA+ YG + +
Sbjct: 29 FHSSSAQPAPLRETEQRIKSVKNIEKITKSMKMIASTKLNKAQRAMAAAKAYGAANTEIF 88
Query: 246 ERAEVTPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGA--------ENIKVI 401
+E PE +QLF+ ++SD+GLCG +H+ V+K + + GA E V+
Sbjct: 89 TNSEAVAPEGG-RQLFIVVSSDKGLCGGIHSSVTKRTKAEFLKIGASAGDASSSEGPAVV 147
Query: 402 CVGDKSRGILQRLYGKHIISVANEIGRLPPTFLDASQLATAILTSGYEFGSGKIIYNKFK 581
+G+KS+ L R K++ N+IG+ PTF DAS +A I+ SG +F +IYNK+
Sbjct: 148 VLGEKSKAQLGRALPKNLALSFNQIGKDVPTFADASAIADQIIKSGIKFDKVNLIYNKYV 207
Query: 582 SVVSYAQSDLPLYTKKSIESA 644
S +S+ + +Y++ ++ +A
Sbjct: 208 SALSFESDVMEVYSEDALRNA 228
>UniRef50_Q5MCG3 Cluster: Mitochondrial ATP synthase gamma subunit;
n=4; Bilateria|Rep: Mitochondrial ATP synthase gamma
subunit - Enchytraeus buchholzi
Length = 135
Score = 135 bits (327), Expect = 8e-31
Identities = 66/135 (48%), Positives = 91/135 (67%), Gaps = 1/135 (0%)
Frame = +3
Query: 159 KMVSAAKYTRAERDLKAARPYGEGAVQFYERAEVTPPEDDPKQLFVAMTSDRGLCGAVHT 338
KMVSAAKY +AER+L+ AR YG GA FYE+AEV E L +AMTSDRGLCG+VH+
Sbjct: 1 KMVSAAKYAKAERELRTARAYGHGAKAFYEKAEVEQDEKKANHLIIAMTSDRGLCGSVHS 60
Query: 339 GVSKVIRNRL-SEPGAENIKVICVGDKSRGILQRLYGKHIISVANEIGRLPPTFLDASQL 515
+ + I+ + ++P N+K I +GDKSR +L RL+ ++ +IG+ PP F DAS +
Sbjct: 61 NIVRSIKADVPNKPAGTNLKFIAIGDKSRSMLGRLFKNDMLMHFVDIGKKPPLFEDASTI 120
Query: 516 ATAILTSGYEFGSGK 560
A IL SGY++ G+
Sbjct: 121 ALEILKSGYQYDVGQ 135
>UniRef50_O74754 Cluster: ATP synthase gamma chain, mitochondrial
precursor; n=1; Schizosaccharomyces pombe|Rep: ATP
synthase gamma chain, mitochondrial precursor -
Schizosaccharomyces pombe (Fission yeast)
Length = 301
Score = 128 bits (310), Expect = 9e-29
Identities = 72/197 (36%), Positives = 113/197 (57%), Gaps = 1/197 (0%)
Frame = +3
Query: 66 YHQPNRNMATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFY 245
+H + ATLK I RLKS+KNI+KIT+++K V+ K TRA+R ++A+ Y + + +
Sbjct: 24 FHASSPCEATLKEIEQRLKSIKNIEKITKTIKTVAQTKLTRAQRAMEASNKYYRVSDEVF 83
Query: 246 ERAEVTPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGA-ENIKVICVGDKSR 422
+ A PE+ K L VA +SD+GLCG +H+ +S++IR L +P EN + +G+K R
Sbjct: 84 KEAGTKAPEEG-KTLMVACSSDKGLCGGIHSSISRLIRRELHDPKTFENTSLCILGEKVR 142
Query: 423 GILQRLYGKHIISVANEIGRLPPTFLDASQLATAILTSGYEFGSGKIIYNKFKSVVSYAQ 602
L R + IG P+F +A Q+++ IL ++ ++YNKF S VS+
Sbjct: 143 TQLLRFCPESFYLTFAHIGGASPSFEEALQISSNILEHAKDYDRIVLVYNKFASAVSFET 202
Query: 603 SDLPLYTKKSIESASKL 653
LYT K+I + L
Sbjct: 203 VMKNLYTTKAINESPNL 219
>UniRef50_Q5BGS8 Cluster: ATP synthase gamma chain; n=14;
Pezizomycotina|Rep: ATP synthase gamma chain -
Emericella nidulans (Aspergillus nidulans)
Length = 304
Score = 126 bits (305), Expect = 4e-28
Identities = 72/203 (35%), Positives = 114/203 (56%), Gaps = 2/203 (0%)
Frame = +3
Query: 33 PGVGTQVVAVVYHQPNR--NMATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLK 206
P V AV P N ATL+ I RLKS+KNI+KIT +MK++++ + TRA++ +
Sbjct: 8 PAVRAGAAAVTRTAPPNAANFATLREIEGRLKSIKNIKKITNTMKVIASTRLTRAQKAMD 67
Query: 207 AARPYGEGAVQFYERAEVTPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAE 386
+R YG+ + +E+AE T +D K L V +SD+GLCG +H+G+SK R L
Sbjct: 68 DSRAYGQTSNTLFEQAE-TKALEDKKTLLVVASSDKGLCGGIHSGLSKAARRALE--ANP 124
Query: 387 NIKVICVGDKSRGILQRLYGKHIISVANEIGRLPPTFLDASQLATAILTSGYEFGSGKII 566
N ++ +G+K++ L R I+ + + PTF DA +A I ++ S K+I
Sbjct: 125 NSDLVVLGEKAKAQLSRTNPNAIVLSFANVCKDIPTFADAQAVADQIALLPTDYASVKVI 184
Query: 567 YNKFKSVVSYAQSDLPLYTKKSI 635
YNKF + SY + Y++++I
Sbjct: 185 YNKFVNAQSYEPDTVEAYSEEAI 207
>UniRef50_P38077 Cluster: ATP synthase gamma chain, mitochondrial
precursor; n=16; Saccharomycetales|Rep: ATP synthase
gamma chain, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 311
Score = 122 bits (294), Expect = 8e-27
Identities = 70/206 (33%), Positives = 122/206 (59%), Gaps = 9/206 (4%)
Frame = +3
Query: 54 VAVVYH-QPNRNMATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEG 230
V ++Y P R ATLK + +RLKS+KNI+KIT++MK+V++ + ++AE+ +A+ E
Sbjct: 21 VGILYKTNPVRTYATLKEVEMRLKSIKNIEKITKTMKIVASTRLSKAEKAKISAKKMDEA 80
Query: 231 AVQFYERAEVTPPEDD------PKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENI 392
FY+ AE + + PK+L VA+TSD+GLCG++H+ ++K +R L++ N
Sbjct: 81 EQLFYKNAETKNLDVEATETGAPKELIVAITSDKGLCGSIHSQLAKAVRRHLND--QPNA 138
Query: 393 KVICVGDKSRGILQRLYGKHIISVANEIGRLPPTFLDASQLATAILT--SGYEFGSGKII 566
++ +GDK + L R + +I N IG+ PTF +++ +A +L+ + I
Sbjct: 139 DIVTIGDKIKMQLLRTHPNNIKLSINGIGKDAPTFQESALIADKLLSVMKAGTYPKISIF 198
Query: 567 YNKFKSVVSYAQSDLPLYTKKSIESA 644
YN S +S+ S+ P++ K+IE +
Sbjct: 199 YNDPVSSLSFEPSEKPIFNAKTIEQS 224
>UniRef50_Q5ENU5 Cluster: ATP synthase gamma chain; n=1; Guillardia
theta|Rep: ATP synthase gamma chain - Guillardia theta
(Cryptomonas phi)
Length = 314
Score = 114 bits (275), Expect = 2e-24
Identities = 65/174 (37%), Positives = 107/174 (61%), Gaps = 5/174 (2%)
Frame = +3
Query: 90 ATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYERAEVTPP 269
A+LK + IRL +VK+IQ+IT++MKMV+AAK + + +RP G+ + + P
Sbjct: 35 ASLKQLRIRLAAVKSIQRITKTMKMVAAAKLKGFQGRMFESRPLGDCVEKMIQEIPPAPE 94
Query: 270 ED----DPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENIKVICVGDKSRGILQR 437
ED D L V +TSDRGLCG +++ V+K +N L++ + + V +G+K +L+R
Sbjct: 95 EDVAAKDLTNLIVPITSDRGLCGGINSAVAKATKNLLNDIPGDKV-VAIIGNKGEALLKR 153
Query: 438 LYGKHIISVANEIGRLPPTFLDASQLA-TAILTSGYEFGSGKIIYNKFKSVVSY 596
+G++I + +++ P +F AS++A +LT Y+ S IIYNKFKS ++Y
Sbjct: 154 THGQYITRIFSDVYVNPTSFALASEIAEELVLTKKYDKAS--IIYNKFKSAIAY 205
>UniRef50_Q4N9B3 Cluster: ATP synthase F1, gamma chain, putative;
n=5; Aconoidasida|Rep: ATP synthase F1, gamma chain,
putative - Theileria parva
Length = 314
Score = 112 bits (269), Expect = 8e-24
Identities = 65/194 (33%), Positives = 107/194 (55%), Gaps = 3/194 (1%)
Frame = +3
Query: 78 NRNMATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYERAE 257
N ++A++ R+KSVK+IQKIT++MKMV+A+K +R L+ RP+ + +
Sbjct: 36 NFGSGDIQAVAARIKSVKSIQKITKAMKMVAASKLRADQRRLEIGRPFSQPSQDVLNLLP 95
Query: 258 VTPPEDDPKQ-LFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAEN--IKVICVGDKSRGI 428
++ E K V M SD+GLCG +++ V+K RN L +++ + +G+K+R
Sbjct: 96 ISTTETGHKDTALVIMASDKGLCGGINSSVAKATRNLLQNVDSQSSAYSLYIIGEKARSA 155
Query: 429 LQRLYGKHIISVANEIGRLPPTFLDASQLATAILTSGYEFGSGKIIYNKFKSVVSYAQSD 608
LQR Y K +V E+ + P + A+ +A + ++ + KIIYN FKSV+SY
Sbjct: 156 LQRNYQKMFKNVFTELTKTPFNYAKAAYIAELLRNGNHD--NIKIIYNHFKSVISYETKV 213
Query: 609 LPLYTKKSIESASK 650
L + T K +K
Sbjct: 214 LDVLTWKQYSLMNK 227
>UniRef50_O21267 Cluster: ATP synthase gamma chain; n=1;
Reclinomonas americana|Rep: ATP synthase gamma chain -
Reclinomonas americana
Length = 281
Score = 110 bits (265), Expect = 2e-23
Identities = 61/190 (32%), Positives = 114/190 (60%), Gaps = 4/190 (2%)
Frame = +3
Query: 87 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYERAEVTP 266
MA+ K R+KS+ +I+KIT++MKMV+A+K +A+R+L RPY + + +
Sbjct: 1 MASTKDFKNRIKSITSIRKITKAMKMVAASKLRQAQRNLDVIRPYFKTVDSLFNEYQNAS 60
Query: 267 PEDD--PKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGA--ENIKVICVGDKSRGILQ 434
+ ++ V ++SDRGLCG ++T V K + +++ A N +ICVG K++ LQ
Sbjct: 61 SNESIVNNKIVVPISSDRGLCGGINTNVVKATKALVTKNNALDTNASIICVGIKAKDQLQ 120
Query: 435 RLYGKHIISVANEIGRLPPTFLDASQLATAILTSGYEFGSGKIIYNKFKSVVSYAQSDLP 614
RLYGK I + ++ + +F +AS +A IL + Y+ + ++YN+F+SV++ +
Sbjct: 121 RLYGKIISTSITDVSKKGVSFANASLIAEEILNTNYD--TCYLVYNQFRSVLTQNVIESK 178
Query: 615 LYTKKSIESA 644
+ ++ ++E++
Sbjct: 179 IASRAALENS 188
>UniRef50_Q7RKU7 Cluster: ATP synthase gamma chain; n=5; Plasmodium
(Vinckeia)|Rep: ATP synthase gamma chain - Plasmodium
yoelii yoelii
Length = 316
Score = 101 bits (242), Expect = 2e-20
Identities = 58/203 (28%), Positives = 113/203 (55%), Gaps = 13/203 (6%)
Frame = +3
Query: 81 RNMAT--LKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYERA 254
RN A+ L+++S+R+KS+K+IQKIT++MKMV+A+K+ ++ L+ + + + R
Sbjct: 29 RNFASDNLRSLSLRMKSIKSIQKITKAMKMVAASKFKGDQKRLENCKYFSTPLADIFNRL 88
Query: 255 EVTPPEDDPKQL-FVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAEN----------IKVI 401
+ L +A++SD+GLCG+V++ +S++ + L +N I +
Sbjct: 89 NQLEIHKKNEDLAIIAISSDKGLCGSVNSSISRICKKILENDQIDNELVNNISPNKISIY 148
Query: 402 CVGDKSRGILQRLYGKHIISVANEIGRLPPTFLDASQLATAILTSGYEFGSGKIIYNKFK 581
+G+K + L RL+ +V +E ++P F+ S +A +IL + + I+YN FK
Sbjct: 149 GIGEKIKSALSRLHSDKFEAVYSEYNKIPINFMTCSYIAESILKKNHT--NLLIVYNNFK 206
Query: 582 SVVSYAQSDLPLYTKKSIESASK 650
S +S+ L ++++K + +K
Sbjct: 207 SAISFDTKILSIFSQKQLNKINK 229
>UniRef50_A4RRG5 Cluster: ATP synthase gamma chain; n=1;
Ostreococcus lucimarinus CCE9901|Rep: ATP synthase gamma
chain - Ostreococcus lucimarinus CCE9901
Length = 328
Score = 100 bits (240), Expect = 3e-20
Identities = 68/208 (32%), Positives = 112/208 (53%), Gaps = 2/208 (0%)
Frame = +3
Query: 33 PGVGTQVVAVVYHQPNRNMATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAA 212
P GT V A N +L+A++IR++SV NIQKIT++MKMV+A++ A+ + +
Sbjct: 35 PRAGTMVNASEGVPANVRTVSLQAVAIRMRSVGNIQKITKAMKMVAASRLKGAQTKCEKS 94
Query: 213 RPYGEGAVQFYERAEVTPPEDDPKQLFVAMTSDRGLCGAVHTGVSK--VIRNRLSEPGAE 386
R F TP + L V ++SD+GLCG ++T V K + N +S PGA
Sbjct: 95 RAL---VNPFVRLLGDTPGTETDSTLVVPISSDKGLCGGINTAVVKYSTVLNAMS-PGA- 149
Query: 387 NIKVICVGDKSRGILQRLYGKHIISVANEIGRLPPTFLDASQLATAILTSGYEFGSGKII 566
++ VGDK+R L RLY I +V + + P TF AS +A I+ +++
Sbjct: 150 --RINVVGDKARAQLNRLYPDRINNVVVDTTKQPLTFGTASAIADEIMAQNAP--KTQLV 205
Query: 567 YNKFKSVVSYAQSDLPLYTKKSIESASK 650
+N+F S +S+ + + + + +E A++
Sbjct: 206 FNRFASAISFKPTVATVLSSEELEKAAE 233
>UniRef50_Q96250 Cluster: ATP synthase gamma chain, mitochondrial
precursor; n=14; Magnoliophyta|Rep: ATP synthase gamma
chain, mitochondrial precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 325
Score = 94.7 bits (225), Expect = 2e-18
Identities = 62/193 (32%), Positives = 108/193 (55%), Gaps = 2/193 (1%)
Frame = +3
Query: 81 RNMATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYERAEV 260
R+++T + + R+KSVKNIQKIT++MKMV+A+K + + +R + F
Sbjct: 41 RSIST-QVVRNRMKSVKNIQKITKAMKMVAASKLRAVQGRAENSRGLWQ---PFTALLGD 96
Query: 261 TPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIR--NRLSEPGAENIKVICVGDKSRGILQ 434
P D K + V ++SD+GLCG +++ V KV R +L+ + ++ + VG+K++ I+
Sbjct: 97 NPSIDVKKSVVVTLSSDKGLCGGINSTVVKVSRALYKLNAGPEKEVQFVIVGEKAKAIMF 156
Query: 435 RLYGKHIISVANEIGRLPPTFLDASQLATAILTSGYEFGSGKIIYNKFKSVVSYAQSDLP 614
R I+ E+ + P + S LA IL EF + +I+YNKF SVV++ +
Sbjct: 157 RDSKNDIVLSVTELNKNPLNYAQVSVLADDIL-KNVEFDALRIVYNKFHSVVAFLPTVST 215
Query: 615 LYTKKSIESASKL 653
+ + + IE S++
Sbjct: 216 VLSPEIIEKESEI 228
>UniRef50_Q54DF1 Cluster: ATP synthase gamma chain; n=1;
Dictyostelium discoideum AX4|Rep: ATP synthase gamma
chain - Dictyostelium discoideum AX4
Length = 306
Score = 91.1 bits (216), Expect = 2e-17
Identities = 56/182 (30%), Positives = 95/182 (52%), Gaps = 9/182 (4%)
Frame = +3
Query: 81 RNMATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEG---AVQFYER 251
RNMATLK + IRL +VK I K+T+++ MV+++K AE+ + + PY G + E
Sbjct: 18 RNMATLKDLKIRLGTVKTISKLTKTLHMVASSKLRSAEKKAEESGPYSVGPQKVLGVVET 77
Query: 252 AEV----TPPEDDP--KQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENIKVICVGD 413
A+ T P +D KQL +A+T+D G+CG V+ + K I+ L + + I V G
Sbjct: 78 ADAFNTATEPIEDRSNKQLLIAITTDTGMCGPVNHQIIKTIKALLKDDAKQEILVSTTGL 137
Query: 414 KSRGILQRLYGKHIISVANEIGRLPPTFLDASQLATAILTSGYEFGSGKIIYNKFKSVVS 593
K + + + + G+ +F + I++ + S ++YNKFK+ +S
Sbjct: 138 KGVAPIVADFPNQFLINGRDFGKADYSFPEVLLFLNEIISKVPNYDSALVVYNKFKNALS 197
Query: 594 YA 599
Y+
Sbjct: 198 YS 199
>UniRef50_Q4LDE7 Cluster: ATP synthase gamma chain, mitochondrial
precursor; n=1; Polytomella sp. Pringsheim 198.80|Rep:
ATP synthase gamma chain, mitochondrial precursor -
Polytomella sp. Pringsheim 198.80
Length = 317
Score = 87.8 bits (208), Expect = 2e-16
Identities = 55/188 (29%), Positives = 107/188 (56%), Gaps = 2/188 (1%)
Frame = +3
Query: 39 VGTQVVAVVYHQPNRNMATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARP 218
+G+ + V H+ R A+ +A+ R++++KNI KIT++MKMV+A+K A+ ++ +R
Sbjct: 22 LGSGMFNAVQHESVR-YASNQAVKQRIRAIKNIGKITKAMKMVAASKMKNAQIAVEQSRG 80
Query: 219 YGEGAVQFYERAEVTPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRL--SEPGAENI 392
+ V+ + P + K + VA+TSD+GLCG +++ ++K R L +E +++
Sbjct: 81 LVDPFVRLFGDF---PAVNSNKSVVVAVTSDKGLCGGLNSNITKYTRATLATTESEGKDV 137
Query: 393 KVICVGDKSRGILQRLYGKHIISVANEIGRLPPTFLDASQLATAILTSGYEFGSGKIIYN 572
V+ +GDK R L R+ + + ++ TF AS + ++ + S +I++N
Sbjct: 138 VVVSIGDKGRSQLTRIESQRYQLAIADTYKVRVTFGQASLIVEELIKHNPQ--SYQILFN 195
Query: 573 KFKSVVSY 596
KF+S +S+
Sbjct: 196 KFRSAISF 203
>UniRef50_Q74GY1 Cluster: ATP synthase gamma chain; n=11;
Deltaproteobacteria|Rep: ATP synthase gamma chain -
Geobacter sulfurreducens
Length = 287
Score = 86.2 bits (204), Expect = 6e-16
Identities = 63/182 (34%), Positives = 92/182 (50%), Gaps = 13/182 (7%)
Frame = +3
Query: 87 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYERAEVTP 266
MA+LK+I R+ SVKN ++IT++MKMVSAAK RA+ ++ AARPY + + +R +
Sbjct: 1 MASLKSIKKRIVSVKNTRQITKAMKMVSAAKLRRAQENVVAARPYAKKLGEVLQRLAKSQ 60
Query: 267 PED---------DPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAE--NIKVICVGD 413
E K L + +TSDRGLCG + + K + E AE I V VG
Sbjct: 61 DESGSPLMQQRLSQKALLIVVTSDRGLCGGFNANICKAAERFIKEKKAEFAEISVTTVGR 120
Query: 414 KSRGILQRLYGKHIISVANEIGRL--PPTFLDASQLATAILTSGYEFGSGKIIYNKFKSV 587
K L+ H + N + L P L A ++ + E+ I++N FKSV
Sbjct: 121 KGYEFLKNRQKIH-KNYGNVLANLSYPAAALLAQEMIEGYIAE--EYDEVYILFNAFKSV 177
Query: 588 VS 593
+S
Sbjct: 178 MS 179
>UniRef50_A4EMZ6 Cluster: ATP synthase gamma chain; n=1; Roseobacter
sp. CCS2|Rep: ATP synthase gamma chain - Roseobacter sp.
CCS2
Length = 259
Score = 82.6 bits (195), Expect = 7e-15
Identities = 61/187 (32%), Positives = 101/187 (54%), Gaps = 18/187 (9%)
Frame = +3
Query: 87 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGE--GAVQFYERAEV 260
M +LK + R++SVK+ +KIT++M+MV+AAK RA+ +A+RPY E AV A V
Sbjct: 1 MPSLKDLKNRIESVKSTRKITKAMQMVAAAKLRRAQDAAEASRPYTERFNAVMGGLAASV 60
Query: 261 TPPEDDPK----------QLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAE--NIKVIC 404
+ PK QL + MT++RGLCG + ++K+ ++ + AE +K+I
Sbjct: 61 GGSDSAPKLLSGTGSDQVQLLIVMTAERGLCGGFNGNIAKLAKSHAQKLLAEGKTVKIIT 120
Query: 405 VGDKSRGILQRLYGKHIISVAN--EIGRLPPTFLDASQLATAIL--TSGYEFGSGKIIYN 572
VG K R ++R H + + E+ R+ + DA +A +L EF I +
Sbjct: 121 VGKKGRDAMKRDLSDHFVGHVDLTEVKRV--GYADAQGIAKDVLGRFDAEEFDVATIFFA 178
Query: 573 KFKSVVS 593
+F++VV+
Sbjct: 179 RFENVVT 185
>UniRef50_Q82XP9 Cluster: ATP synthase gamma chain; n=123;
Proteobacteria|Rep: ATP synthase gamma chain -
Nitrosomonas europaea
Length = 294
Score = 81.8 bits (193), Expect = 1e-14
Identities = 59/178 (33%), Positives = 91/178 (51%), Gaps = 14/178 (7%)
Frame = +3
Query: 87 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGE-----GAVQFYER 251
M + + I ++KSVKN QKIT++M+MV+A+K +A+ +K ARPYGE A
Sbjct: 1 MPSSREIRNKIKSVKNTQKITRAMEMVAASKMRKAQDRMKKARPYGEKIRNVAAHMSNAS 60
Query: 252 AEVTPP----EDDPKQL-FVAMTSDRGLCGAVHTGVSKVIRN--RLSEPGAENIKVICVG 410
E P D K++ + +TSD+GLCG ++T V + N R E ++ C+G
Sbjct: 61 VEYRHPFLISRDSVKRVGIIVVTSDKGLCGGLNTNVLRRALNEIRTWETEGNHVDACCIG 120
Query: 411 DKSRGILQRLYGKHIISVANEIGRLP--PTFLDASQLATAILTSGYEFGSGKIIYNKF 578
+K G + RL G +IS +G P + A ++ T G + I YN+F
Sbjct: 121 NKGLGFMSRL-GTQVISQVTGLGDAPNMERLIGAVKVVLDAYTEG-QLDRVYIFYNRF 176
>UniRef50_Q24MP0 Cluster: ATP synthase gamma chain; n=4;
Clostridiales|Rep: ATP synthase gamma chain -
Desulfitobacterium hafniense (strain Y51)
Length = 284
Score = 81.4 bits (192), Expect = 2e-14
Identities = 58/189 (30%), Positives = 106/189 (56%), Gaps = 12/189 (6%)
Frame = +3
Query: 87 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYER----- 251
+A+ + I R++ V+N+Q+IT++MKMV+A+K +A+ + AARPY + R
Sbjct: 4 VASARDIRRRIRGVRNMQQITKAMKMVAASKLRKAQEKVIAARPYARQLQEVLARLAQDQ 63
Query: 252 AEVTPP--EDDPKQL--FVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENIKVICVGDKS 419
A+VT P + P Q ++ +TSDRGLCG +T + ++ + ++E +++++ VG K
Sbjct: 64 ADVTHPLLMERPVQRVGYIIITSDRGLCGGYNTNLIRMTNSSIAEE-THDVRLVAVGRKG 122
Query: 420 RGILQRLYGKHIISVANEIGRLP-PTFLDASQLATAI--LTSGYEFGSGKIIYNKFKSVV 590
R +R GK I ++A +G P++ A ++A + L E ++YN+F S +
Sbjct: 123 RDFYRR--GK-IETIAEFVGLGDNPSYGQAKEIAQEVIGLYESGELDEVYLLYNEFVSAI 179
Query: 591 SYAQSDLPL 617
S + + L
Sbjct: 180 SQRPTRIKL 188
>UniRef50_Q1IIG7 Cluster: ATP synthase gamma chain; n=1;
Acidobacteria bacterium Ellin345|Rep: ATP synthase gamma
chain - Acidobacteria bacterium (strain Ellin345)
Length = 345
Score = 81.0 bits (191), Expect = 2e-14
Identities = 65/198 (32%), Positives = 96/198 (48%), Gaps = 29/198 (14%)
Frame = +3
Query: 87 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAV----QFYERA 254
MA++ + R++SVKN ++IT++MKMVSAA+ RA+ AARPYG+ RA
Sbjct: 1 MASILDLRRRIRSVKNTRQITRAMKMVSAARLRRAQERALAARPYGQMLTNVLKSLVSRA 60
Query: 255 EVTPPE------------DDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENIKV 398
E PE D+ L V +T DRGL GA + ++K + +NI +
Sbjct: 61 ETIDPETGKAQHPLLEQRDEQNILLVVVTGDRGLAGAFNANITKTALRFMERKFDKNIDI 120
Query: 399 ICVGDKSRGILQRLY--GK--------HIISVANEIGRLPPTFLDASQLATAILTSGYEF 548
VG K R L+R Y GK + A +G L + Q + + YE
Sbjct: 121 EAVGRKGRDFLRRRYPLGKSEAEQRAGQVQVTAEHVGVLNKVAFEEVQDISESIMGRYER 180
Query: 549 G---SGKIIYNKFKSVVS 593
G + +I+N+FKSV+S
Sbjct: 181 GEVDAVYLIFNEFKSVIS 198
>UniRef50_Q7VA64 Cluster: ATP synthase gamma chain; n=19; cellular
organisms|Rep: ATP synthase gamma chain -
Prochlorococcus marinus
Length = 316
Score = 78.2 bits (184), Expect = 2e-13
Identities = 61/195 (31%), Positives = 96/195 (49%), Gaps = 18/195 (9%)
Frame = +3
Query: 87 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYERAEVT- 263
MA LK I R+ SVKN +KIT++M++V+AAK RA+ + +RP+ + + E +
Sbjct: 1 MANLKEIRDRIVSVKNTRKITEAMRLVAAAKVRRAQEQVLRSRPFADRLARVLENIQSRM 60
Query: 264 --PPEDDP--------KQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAE--NIKVICV 407
D P K +A+T DRGLCG +T V K R E ++ I ++ +
Sbjct: 61 KFEAADSPLLKARAVQKVTLLAVTGDRGLCGGYNTNVIKRTEQRYGELSSQGFEIDLVLI 120
Query: 408 GDKSRGILQRLYGKHIISVANEIGRLPPTFLDASQLATAILTSGYEFGSGK--IIYNKFK 581
G K+ Q ++ I + + PT DA + + +L+ + + IIY KF
Sbjct: 121 GRKAITYFQNRSSQYKIRASFQDLEQVPTSKDAEEATSEVLSEFLSESTDRVEIIYTKFI 180
Query: 582 SVVS---YAQSDLPL 617
S+VS Q+ LPL
Sbjct: 181 SLVSCDPVVQTLLPL 195
>UniRef50_Q57B87 Cluster: ATP synthase gamma chain; n=42;
Proteobacteria|Rep: ATP synthase gamma chain - Brucella
abortus
Length = 292
Score = 78.2 bits (184), Expect = 2e-13
Identities = 65/187 (34%), Positives = 98/187 (52%), Gaps = 18/187 (9%)
Frame = +3
Query: 87 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGE--GAVQFYERAEV 260
M +LK + R+ SVK QKIT++M+MV+AAK RA+ +AARPY + GAV A+
Sbjct: 1 MPSLKDLRNRIASVKATQKITKAMQMVAAAKLRRAQEAAEAARPYSQRMGAV-LANIAQN 59
Query: 261 TPPEDDPK----------QLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAE--NIKVIC 404
ED P L V T+ RGLCG ++ ++++ R+ + AE +K+I
Sbjct: 60 VSGEDAPALMVGTGKDDVHLLVVCTAKRGLCGGFNSQIARLARDHARKLLAEGKTVKIIT 119
Query: 405 VGDKSRGILQRLYGK--HIISVANEIGRLPPTFLDASQLATAILTSGYE--FGSGKIIYN 572
VG K IL+R + H E+ +L F+ A Q+ I+ E F + Y+
Sbjct: 120 VGKKGADILRREFSALLHDHVDLREVKQL--AFVHADQIGHKIIKLFEEGAFDVCTLFYS 177
Query: 573 KFKSVVS 593
+FKSV+S
Sbjct: 178 EFKSVIS 184
>UniRef50_Q2S431 Cluster: ATP synthase gamma chain; n=1;
Salinibacter ruber DSM 13855|Rep: ATP synthase gamma
chain - Salinibacter ruber (strain DSM 13855)
Length = 308
Score = 76.6 bits (180), Expect = 5e-13
Identities = 57/195 (29%), Positives = 96/195 (49%), Gaps = 18/195 (9%)
Frame = +3
Query: 87 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGE--GAVQFYERAEV 260
MA L+ I R+ S++N +++T++MKMV+AAK RA+ + ARPY G + + + E+
Sbjct: 1 MANLRDIRNRIDSIENTKQVTRAMKMVAAAKLRRAQEKIFRARPYAYKIGELTNHLKQEL 60
Query: 261 TP--------PEDDPKQLFVAMTSDRGLCG-----AVHTGVSKVIRNRLSEPGAENIKVI 401
P PE+ L + +T+DRGLCG A++T + A+++ ++
Sbjct: 61 DPTAHPFFQAPEEASGALVIVITADRGLCGSFNSDAINTAEHLIETTYAETQSADDLFML 120
Query: 402 CVGDKSRGILQRLYGKHIISVANEIGRLPPTFLDASQLATAILTSGYE---FGSGKIIYN 572
CVG K Q+ + V + G D +Q G+E +G K++YN
Sbjct: 121 CVGKKGHKHFQK---RDYRLVGDYKGVFDGLNFDVAQQVVEDAVEGFERGIWGEVKLVYN 177
Query: 573 KFKSVVSYAQSDLPL 617
+FK+ + Q PL
Sbjct: 178 EFKNTIVQNQIVEPL 192
>UniRef50_A0EFI5 Cluster: ATP synthase gamma chain; n=6;
Oligohymenophorea|Rep: ATP synthase gamma chain -
Paramecium tetraurelia
Length = 303
Score = 76.6 bits (180), Expect = 5e-13
Identities = 55/192 (28%), Positives = 102/192 (53%), Gaps = 6/192 (3%)
Frame = +3
Query: 96 LKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQ--FYERAEVTPP 269
LK + R+KSV +I+KIT++MKMV+A+K + + L+ + +G ++Q F + +
Sbjct: 28 LKQLKQRMKSVGSIRKITKAMKMVAASKMKQDVQRLENGKYFGVRSLQDLFAQETYLQKK 87
Query: 270 E---DDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENIKVICVGDKSRGILQRL 440
+ K L V +TSD+GLCG +++ + + R+ + K+ +G+KS G LQR
Sbjct: 88 QLTFKINKTLIVPITSDKGLCGGINSSIIRETRS-IVRQNRNAYKLFLIGEKSLGALQRG 146
Query: 441 YGKHIISVANEIGRLPPTFLDASQLATAI-LTSGYEFGSGKIIYNKFKSVVSYAQSDLPL 617
+ + + I + P F+++S +A I + II+N+FK+VV + L
Sbjct: 147 FPELLTQAITAI-QTPINFVNSSSIAHQIQFNVTDDIDQISIIFNQFKNVVQQVIKRVDL 205
Query: 618 YTKKSIESASKL 653
+K+ + +L
Sbjct: 206 LNRKNFIAQFRL 217
>UniRef50_Q5NQZ0 Cluster: ATP synthase gamma chain; n=7;
Alphaproteobacteria|Rep: ATP synthase gamma chain -
Zymomonas mobilis
Length = 298
Score = 76.2 bits (179), Expect = 6e-13
Identities = 53/190 (27%), Positives = 94/190 (49%), Gaps = 16/190 (8%)
Frame = +3
Query: 87 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYE----RA 254
M +LK++ R+ S+K+I KIT++M+MV++AK RAE L AARPY + Q RA
Sbjct: 1 MPSLKSLKTRVSSIKSISKITRAMQMVASAKLRRAESRLAAARPYAKRMAQVMSLLAARA 60
Query: 255 EVTPPE--------DDPKQLFVAMTSDRGLCGAVHTGVSKVIRNR--LSEPGAENIKVIC 404
TP D L + +SD GLCG ++ + + R+R E + ++
Sbjct: 61 AGTPNALPLLNGRGKDQTHLLIVTSSDAGLCGGFNSNIYRQARDRALALEAAGKTVQFYV 120
Query: 405 VGDKSRGILQRLYGKHIISVANEIGRLPPTFLDASQLATAILT--SGYEFGSGKIIYNKF 578
+G K+ +++ + I P TF +A ++A ++ + EF + ++ +
Sbjct: 121 IGIKNAPVIRNNFPGKTIHETKREETSPVTFENAQKIAQDLIQRFNAGEFDVAHLFFSHY 180
Query: 579 KSVVSYAQSD 608
SV+S ++
Sbjct: 181 HSVLSQVPTE 190
>UniRef50_Q7VU45 Cluster: ATP synthase gamma chain; n=29;
Proteobacteria|Rep: ATP synthase gamma chain -
Bordetella pertussis
Length = 301
Score = 75.8 bits (178), Expect = 9e-13
Identities = 56/170 (32%), Positives = 95/170 (55%), Gaps = 11/170 (6%)
Frame = +3
Query: 87 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYG----EGAVQFYE-R 251
M +K I ++KSV+N +KIT++M+MV+A+K +A+ ++A RPY E A +
Sbjct: 1 MPGIKEIRTKIKSVQNTRKITKAMEMVAASKMRKAQERMRAGRPYATKVREIAAHLMQAN 60
Query: 252 AEVTPP---EDDPKQL-FVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENIKV--ICVGD 413
E + P E + K + V +T+D+GLCG ++T +S+V ++L E +IKV G+
Sbjct: 61 PEYSHPYLVEREVKAVGVVLVTTDKGLCGGLNTNISRVTLSKLKEFEQRSIKVQATAFGN 120
Query: 414 KSRGILQRLYGKHIISVANEIGRLPPTFLDASQLATAILTSGYEFGSGKI 563
K G+L R+ G ++S ++G P D +L AI ++ G+I
Sbjct: 121 KGLGLLTRI-GAKLVSQEVQLGDKP----DLDRLLGAIKVQLDDYLEGRI 165
>UniRef50_A2Z5X7 Cluster: ATP synthase gamma chain; n=3; Oryza
sativa|Rep: ATP synthase gamma chain - Oryza sativa
subsp. indica (Rice)
Length = 368
Score = 65.7 bits (153), Expect(2) = 3e-12
Identities = 45/133 (33%), Positives = 73/133 (54%), Gaps = 3/133 (2%)
Frame = +3
Query: 99 KAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYERAEVTPPEDD 278
+A+ R+KSV+NIQKIT++MKMV+A+K + + +R + F P D
Sbjct: 60 RALRTRMKSVRNIQKITKAMKMVAASKLRAVQIRTENSRGLWQ---PFTALLGDVPSVDV 116
Query: 279 PKQLFVAMTSDRGLCGAVHT---GVSKVIRNRLSEPGAENIKVICVGDKSRGILQRLYGK 449
K + VA+TSD+GLCG +++ VSK + S P E+ K + +G+K + L R
Sbjct: 117 KKNVIVAITSDKGLCGGINSTSVKVSKALHKLTSGPEKES-KYVILGEKGKVQLIRDSKD 175
Query: 450 HIISVANEIGRLP 488
+I +E+ + P
Sbjct: 176 NIEMTVSELQKNP 188
Score = 28.3 bits (60), Expect(2) = 3e-12
Identities = 12/56 (21%), Positives = 29/56 (51%)
Frame = +3
Query: 483 LPPTFLDASQLATAILTSGYEFGSGKIIYNKFKSVVSYAQSDLPLYTKKSIESASK 650
L F+D + + E+ + ++++NKF SV+S+ + + + + +E S+
Sbjct: 218 LQQKFMDVIAVLADDILKNVEYDALRVVFNKFHSVISFKPTMTTILSPEVMEKESE 273
>UniRef50_A1ZKB6 Cluster: ATP synthase gamma chain; n=6; cellular
organisms|Rep: ATP synthase gamma chain - Microscilla
marina ATCC 23134
Length = 310
Score = 73.7 bits (173), Expect = 3e-12
Identities = 67/218 (30%), Positives = 108/218 (49%), Gaps = 29/218 (13%)
Frame = +3
Query: 87 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYG---EGAVQFYER-- 251
MA LK I R+ +VK+ Q+IT++MKMV+AAK RA+ ++ RPY +G + R
Sbjct: 1 MANLKEIRTRISTVKSTQQITKAMKMVAAAKLRRAQDAIEGMRPYASMLKGIIDNLSRNM 60
Query: 252 ------AEVTPPEDDPKQLFVAMTSDRGLCGAVHTGVSK----VIRNRLSEPGAE-NIKV 398
+E K L +A+TSDRGLCGA + + K + ++ ++ A+ N+
Sbjct: 61 SSEDLTSEFMEDRSPEKVLIIAITSDRGLCGAFNNNIIKAAVALAEDKYADQLAKGNLTF 120
Query: 399 ICVGDK-SRGILQRLYGKHIISVANEIGRLPP-------TFLDASQLATAILT--SGYEF 548
+ +G K S G+ +R Y N G L F + A +L E
Sbjct: 121 LTIGKKASEGLARREYKTIFPQKRNAQGELERVEVFQNLNFANIKDTAEVVLEQFKSGEI 180
Query: 549 GSGKIIYNKFKSVVSYA---QSDLPLYTKKSIESASKL 653
+IIYN+F +V++ A + LP+ + SIE +S++
Sbjct: 181 DRVEIIYNEFINVITQAVRCKQFLPI-SADSIEDSSEI 217
>UniRef50_Q8KAW9 Cluster: ATP synthase gamma chain; n=11;
Bacteria|Rep: ATP synthase gamma chain - Chlorobium
tepidum
Length = 292
Score = 72.9 bits (171), Expect = 6e-12
Identities = 57/185 (30%), Positives = 91/185 (49%), Gaps = 16/185 (8%)
Frame = +3
Query: 87 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYG----EGAVQFYERA 254
M TLK I IRLK VK+ Q++T++MKMV+AAK RA+ ARPY E +
Sbjct: 1 MPTLKDIRIRLKGVKSTQQVTKAMKMVAAAKLRRAQDRAIQARPYAGKLKEMLASLSTKV 60
Query: 255 E------VTPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAE-----NIKVI 401
+ ++P E+ L + +TSDRGLCG + + K+ + + E A + +I
Sbjct: 61 DTSVNPLLSPREEVNNVLVILVTSDRGLCGGFNANIIKMAQRLIHEEYAALHAKGGVTMI 120
Query: 402 CVGDKSRGILQRLYGKHIISVANEIGRLP-PTFLDASQLATAILTSGYEFGSGKIIYNKF 578
C G K ++ K + L + + + A+ + SG E ++YN+F
Sbjct: 121 CAGTKGTEFFRKRGYKLAAAYPGVFQNLSFDSAREIADKASKMYLSG-EVDRVVLVYNEF 179
Query: 579 KSVVS 593
KSV++
Sbjct: 180 KSVLA 184
>UniRef50_Q2AH77 Cluster: ATP synthase gamma chain; n=1;
Halothermothrix orenii H 168|Rep: ATP synthase gamma
chain - Halothermothrix orenii H 168
Length = 287
Score = 72.5 bits (170), Expect = 8e-12
Identities = 58/189 (30%), Positives = 98/189 (51%), Gaps = 12/189 (6%)
Frame = +3
Query: 87 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGE-------GAVQFY 245
M T++ I R+ S+KN QKIT++MKMV+AAK +A+ + ARP+ E +
Sbjct: 1 METMRDIKRRINSIKNTQKITKAMKMVAAAKLKKAQLKAENARPFFEKTRSILIDVARRT 60
Query: 246 ERAEVTP---PEDDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENIKVICVGDK 416
+ ++ P +++ + LFV +T+DRGLCGA + V ++ +L+E + + + VG K
Sbjct: 61 RQKDIHPLLREKENNRSLFVMITADRGLCGAYNARVIDRVK-KLTEK-EDEVNFLAVGRK 118
Query: 417 SRGILQRLYGKHIISVANEIGRLPPTFLDASQLATAILTSGYEFGSGKI--IYNKFKSVV 590
R + G +IIS I P L A ++ I++ + ++ +Y F S +
Sbjct: 119 GRDFFGK-RGYNIISEYINIDDYPDYSL-AGKIGEEIISLFLDDVVDRVVLVYTYFNSAI 176
Query: 591 SYAQSDLPL 617
S DL L
Sbjct: 177 SQEVRDLTL 185
>UniRef50_Q7U8W4 Cluster: ATP synthase gamma chain; n=22;
Cyanobacteria|Rep: ATP synthase gamma chain -
Synechococcus sp. (strain WH8102)
Length = 316
Score = 72.5 bits (170), Expect = 8e-12
Identities = 55/195 (28%), Positives = 97/195 (49%), Gaps = 18/195 (9%)
Frame = +3
Query: 87 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYERAEVTP 266
MA LK I R+KSVKN +KIT++M++V+AAK RA+ + +RP+ + + E +
Sbjct: 1 MANLKEIRDRIKSVKNTRKITEAMRLVAAAKVRRAQEQVLRSRPFADRLARILENLQSRM 60
Query: 267 PEDDPKQ-----------LFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAE--NIKVICV 407
+D V++T DRGLCG + + K R +E + +K++ +
Sbjct: 61 RFEDASSPLMEQRDVETITLVSVTGDRGLCGGYNANIIKRTEQRFAELTGKGFKVKLVLI 120
Query: 408 GDKSRGILQRLYGKHIISVANEIGRLPPTFLDASQLATAILTSGYEFGSGKI--IYNKFK 581
G+K+ G + + + PT +A+ ++T +L G+ ++ I+ KF
Sbjct: 121 GNKAIGYFTK--RDYPVQATFSGLEQVPTADEANTISTDVLAEFIGAGTDRVELIFTKFI 178
Query: 582 SVVS---YAQSDLPL 617
++VS Q+ LPL
Sbjct: 179 NLVSCKPVVQTLLPL 193
>UniRef50_Q6MGM6 Cluster: ATP synthase gamma chain; n=1;
Bdellovibrio bacteriovorus|Rep: ATP synthase gamma chain
- Bdellovibrio bacteriovorus
Length = 295
Score = 72.5 bits (170), Expect = 8e-12
Identities = 54/182 (29%), Positives = 91/182 (50%), Gaps = 13/182 (7%)
Frame = +3
Query: 87 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYERAEVTP 266
MA+LK I +++S KN Q+IT++MK+VSAAK +A+ ++ RPY Q VT
Sbjct: 1 MASLKDIRAQIESTKNTQQITKAMKLVSAAKLRKAQNNIVNMRPYALALRQVIADIAVTN 60
Query: 267 PEDDP---------KQLFVAMTSDRGLCGAVHTGVSKVIR--NRLSEPGAENIKVICVGD 413
P L V +TSDRGLCGA ++ ++K ++ E I + VG
Sbjct: 61 KVSHPLMEKKEQVKNVLLVVITSDRGLCGAFNSNINKFAEAYYNSNKASLEKIDFLFVGR 120
Query: 414 KSRGILQRLYGKHIISVANEIGRLPPTFLDASQLATAILTSGYE--FGSGKIIYNKFKSV 587
+ R G + ++ + ++ AS++A ++ E + +I++N+FKS
Sbjct: 121 RGHDYFAR-RGIKAVDYITKLDK-DISYELASKVANRVMNDYLEGSYDEVRIVHNEFKSA 178
Query: 588 VS 593
+S
Sbjct: 179 IS 180
>UniRef50_A3U635 Cluster: ATP synthase gamma chain; n=13;
Bacteroidetes|Rep: ATP synthase gamma chain -
Croceibacter atlanticus HTCC2559
Length = 289
Score = 71.7 bits (168), Expect = 1e-11
Identities = 58/199 (29%), Positives = 99/199 (49%), Gaps = 17/199 (8%)
Frame = +3
Query: 87 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYERAEVTP 266
MA LK + R+ SV + +IT +MKMVSAAK +A+ + RPY + + T
Sbjct: 1 MANLKELRNRITSVSSTMQITSAMKMVSAAKLNKAQDAITKMRPYSNKLTELLQSLSATL 60
Query: 267 PEDD----------PKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENI--KVICVG 410
D K L VA++S+RGL GA +T + K +++ L+E + I +VI +G
Sbjct: 61 DADSGSDFAEERQINKVLIVAISSNRGLAGAFNTNIIKKVKS-LTETTYKGISTEVITIG 119
Query: 411 DKSRGILQRLYGKHIISVANEIGRLPPTFLDASQLATAILT--SGYEFGSGKIIYNKFKS 584
K+ IL++ H ++ N +F + +++A ++ E+ I+YN FK+
Sbjct: 120 KKANDILKK---THTVTTNNNSLFDDLSFENVAEVAEDLMAKFKNREYDKIVIVYNSFKN 176
Query: 585 VVSYA---QSDLPLYTKKS 632
+ + LPL K++
Sbjct: 177 AATQIVMNEQFLPLVAKQN 195
>UniRef50_Q5HBD0 Cluster: ATP synthase gamma chain; n=5; canis
group|Rep: ATP synthase gamma chain - Ehrlichia
ruminantium (strain Welgevonden)
Length = 283
Score = 71.3 bits (167), Expect = 2e-11
Identities = 51/176 (28%), Positives = 87/176 (49%), Gaps = 8/176 (4%)
Frame = +3
Query: 87 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYE------ 248
MA LKA+ +R+KSVK+IQK T+ M+M+SAAK + ++ L AR + + +
Sbjct: 1 MANLKALFLRMKSVKSIQKTTKVMQMISAAKLRQVQQRLNNARMHMLELSKIIDTNVVTK 60
Query: 249 RAEVTPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLS--EPGAENIKVICVGDKSR 422
E T P + L V M+SDRGLCG + + K ++ + E +N+K++ G +
Sbjct: 61 NNECTGPHNKKDILLVIMSSDRGLCGNFNNMIVKFAKSYIEELESCGKNVKLLFFGKVAY 120
Query: 423 GILQRLYGKHIISVANEIGRLPPTFLDASQLATAILTSGYEFGSGKIIYNKFKSVV 590
++ Y I+ V + I + FL +F +++NKF + +
Sbjct: 121 NMMCSQYSSKILDVFSNIQSI-TDFLSFKLFLYGSGVDFNQFIGVMVLFNKFYTTI 175
>UniRef50_A3EQ50 Cluster: ATP synthase gamma chain; n=1;
Leptospirillum sp. Group II UBA|Rep: ATP synthase gamma
chain - Leptospirillum sp. Group II UBA
Length = 291
Score = 70.1 bits (164), Expect = 4e-11
Identities = 50/180 (27%), Positives = 96/180 (53%), Gaps = 11/180 (6%)
Frame = +3
Query: 87 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGE------GAVQFYE 248
M +L++I R+KSVKN ++IT++M+MV++AK +A++ + RPY E + + E
Sbjct: 1 MPSLRSIRSRIKSVKNTRQITKAMEMVASAKMRKAQQRVMDTRPYAEKIYDLMHRIAYLE 60
Query: 249 RAEVTPP-EDDPKQL--FVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENIKVICVGDKS 419
R+ P E P + V +++DRGLCGA++ + + + + E N + + +G K
Sbjct: 61 RSFPHPYFEVRPVKTAGIVLVSTDRGLCGAINANLFRSLTRFMKERPGTNFEFVTIGRKG 120
Query: 420 RGILQR--LYGKHIISVANEIGRLPPTFLDASQLATAILTSGYEFGSGKIIYNKFKSVVS 593
R ++R L + +I + G + L A+Q+ + + + Y +F+S++S
Sbjct: 121 RDFVRRSGLPLQGVIHGVKDRGTI-EEILPATQVVIEEFYTKKHWEEVWVFYTQFESIMS 179
>UniRef50_Q6G1W8 Cluster: ATP synthase gamma chain; n=44;
Bacteria|Rep: ATP synthase gamma chain - Bartonella
henselae (Rochalimaea henselae)
Length = 303
Score = 69.7 bits (163), Expect = 6e-11
Identities = 57/184 (30%), Positives = 89/184 (48%), Gaps = 15/184 (8%)
Frame = +3
Query: 87 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEG-AVQFYERAEVT 263
MA+LK + R+ SVK QKIT++M+MV+AA+ RA+ +ARPY + A A
Sbjct: 1 MASLKDLRDRIASVKATQKITKAMQMVAAARLHRAQEAAHSARPYAKRMAAILANLANDV 60
Query: 264 PPEDDPK----------QLFVAMTSDRGLCGAVHTGVSKVIRNRLSE--PGAENIKVICV 407
P D P L V T++RGLCGA + +++ R + + +KV+ V
Sbjct: 61 DPIDAPSLMRGTGRDDVHLLVVCTAERGLCGAFNVQIARRAREHIKTLLAAGKIVKVLTV 120
Query: 408 GDKSRGILQRLYGKHIISVANEIGRLPPTFLDASQLATAI--LTSGYEFGSGKIIYNKFK 581
G K IL R Y +I + F +A+ ++ I L F + Y++F
Sbjct: 121 GKKGADILSRDYKALMIDHIDLQSIKRVGFAEAAMISQKIVDLFDDDAFDVCTLFYSEFV 180
Query: 582 SVVS 593
SV++
Sbjct: 181 SVIN 184
>UniRef50_P0C1M0 Cluster: ATP synthase subunit gamma, chloroplast
precursor (EC 3.6.3.14) [Contains: Inceptin]; n=12;
Eukaryota|Rep: ATP synthase subunit gamma, chloroplast
precursor (EC 3.6.3.14) [Contains: Inceptin] - Zea mays
(Maize)
Length = 359
Score = 68.5 bits (160), Expect = 1e-10
Identities = 58/200 (29%), Positives = 96/200 (48%), Gaps = 19/200 (9%)
Frame = +3
Query: 93 TLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQ-FYERAEVTPP 269
+L+ + R+ SV+N QKIT++MK+V+AAK RA+ + ++RP+ E V+ Y +
Sbjct: 37 SLRELRTRIDSVRNTQKITEAMKLVAAAKVRRAQEAVVSSRPFSEALVEVLYNMNQEIQT 96
Query: 270 ED----------DPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENIK--VICVGD 413
ED K V +T +RGLCG+ + V K R+ E ++ V+ VG
Sbjct: 97 EDIDLPLTRTRPVKKVALVVLTGERGLCGSFNNNVLKKAETRIDELKQLGLQYTVVSVGK 156
Query: 414 KSRGILQRLYGKHIISVANEIG-RLPPTFLDASQLATAI--LTSGYEFGSGKIIYNKFKS 584
K QR + I + ++ PT D+ + + L E +++Y+KF S
Sbjct: 157 KGNAYFQR---RPYIPLERDLEVSSVPTVKDSQAICDLVYSLFVSEEVDKVELLYSKFVS 213
Query: 585 VV---SYAQSDLPLYTKKSI 635
+V Q+ LP+ K I
Sbjct: 214 LVRSDPIIQTLLPMSPKGEI 233
>UniRef50_A6G263 Cluster: ATP synthase gamma chain; n=1;
Plesiocystis pacifica SIR-1|Rep: ATP synthase gamma
chain - Plesiocystis pacifica SIR-1
Length = 322
Score = 67.7 bits (158), Expect = 2e-10
Identities = 49/130 (37%), Positives = 70/130 (53%), Gaps = 14/130 (10%)
Frame = +3
Query: 87 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYG---EGAV-----QF 242
MA LK I IR+KSVKN +KIT +M ++AA+ RA+ ++AAR YG G V +
Sbjct: 1 MANLKEIRIRIKSVKNTRKITSAMSRIAAARLRRAQLAMEAARDYGTRMAGIVGEILSEL 60
Query: 243 YERAEVTP---PEDDPKQLFVAMTSDRGLCGAVHTGVSKVIRNR---LSEPGAENIKVIC 404
+ A + P +V +T+DRGLCG ++ V++ L E G E + VI
Sbjct: 61 EDAASLHPLLAEGQSDAVAYVVITADRGLCGGFNSAVNRQSEREIKALREAGRE-VHVIT 119
Query: 405 VGDKSRGILQ 434
VG K R L+
Sbjct: 120 VGRKGRDYLR 129
>UniRef50_Q92G87 Cluster: ATP synthase gamma chain; n=10;
Rickettsia|Rep: ATP synthase gamma chain - Rickettsia
conorii
Length = 323
Score = 67.3 bits (157), Expect = 3e-10
Identities = 55/186 (29%), Positives = 95/186 (51%), Gaps = 17/186 (9%)
Frame = +3
Query: 87 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGE------GAVQFYE 248
M+ LK + R+KSVK+ QKIT++M++VSA+K + + + + Y E A+ +
Sbjct: 1 MSNLKQLRTRIKSVKSTQKITKAMQLVSASKMAKIKSQIANSNFYIEAVSKMMSAILSID 60
Query: 249 RAEVTPPED-------DPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLS--EPGAENIKVI 401
E++ E + L + MTS RGLCG + + K ++N + E E IK+I
Sbjct: 61 MYELSIEEQKFFNTVPNKANLLIVMTSQRGLCGTFNYSIIKQVKNDIKELENKGEQIKLI 120
Query: 402 CVGDKSRGILQRLYGKHIISVANEIGRLPPTFLDASQLATAILTS--GYEFGSGKIIYNK 575
+G K L+R Y +I S E+ ++ L Q+ I+++ E + I +NK
Sbjct: 121 IIGKKGYEALKRQYVNYIDSYF-ELPKIHDENL-MLQVKQKIMSAVENLEVSNCVIYFNK 178
Query: 576 FKSVVS 593
FK+ ++
Sbjct: 179 FKNAMT 184
>UniRef50_Q5PAR4 Cluster: ATP synthase gamma chain; n=2;
Anaplasma|Rep: ATP synthase gamma chain - Anaplasma
marginale (strain St. Maries)
Length = 287
Score = 66.1 bits (154), Expect = 7e-10
Identities = 40/120 (33%), Positives = 66/120 (55%), Gaps = 5/120 (4%)
Frame = +3
Query: 87 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEG-AVQFYERAEVT 263
MA LKA+++R++SV++IQK T+ M+M+SA+K+ A L AR Y A + E +
Sbjct: 1 MANLKALALRIRSVRSIQKTTRVMQMISASKFRIAREGLVCARDYCSAIAKEDSEHRYLA 60
Query: 264 PPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGA----ENIKVICVGDKSRGIL 431
L V +SD+GLCG + V+K +R +S + E + + VG K+ ++
Sbjct: 61 EAGGASGVLLVVFSSDKGLCGGFNHSVAKFLREYVSSMASSSDGERLSFLFVGKKAHELV 120
>UniRef50_Q1VL71 Cluster: Putative uncharacterized protein; n=1;
Psychroflexus torquis ATCC 700755|Rep: Putative
uncharacterized protein - Psychroflexus torquis ATCC
700755
Length = 216
Score = 66.1 bits (154), Expect = 7e-10
Identities = 43/201 (21%), Positives = 101/201 (50%), Gaps = 13/201 (6%)
Frame = +3
Query: 87 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYER----- 251
MA K I ++ SV+N KIT +M++V+++K + + + +PY + ++ +
Sbjct: 1 MAQTKEIRKKIGSVQNTMKITSAMELVASSKMKKTQDAMSKGKPYSKKIIELIDNLAGAS 60
Query: 252 AEVTPP----EDDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAE--NIKVICVGD 413
+E P + +++ + +D+GLCG +++ + K+ +++ +E +K + G
Sbjct: 61 SEYKHPFFNTTAEKTDIYIIVGTDKGLCGGLNSNLFKLALKNMAQRESEGRKVKAVLFGK 120
Query: 414 KSRGILQRLYGKHIISVANEIGRLPPT--FLDASQLATAILTSGYEFGSGKIIYNKFKSV 587
K+ + RL ++ A+ +G +P + A+Q+A + +G G+ + N+F +
Sbjct: 121 KATEVFSRLKNAEVLGSASRLGDIPTVEDVIGAAQIAISEFEAG-NIGNVYLYGNEFVNT 179
Query: 588 VSYAQSDLPLYTKKSIESASK 650
+S + + +IES ++
Sbjct: 180 MSQKPFERKVLPITNIESEAE 200
>UniRef50_Q9L6B6 Cluster: ATP synthase gamma chain; n=45;
Gammaproteobacteria|Rep: ATP synthase gamma chain -
Pasteurella multocida
Length = 289
Score = 65.7 bits (153), Expect = 9e-10
Identities = 51/185 (27%), Positives = 92/185 (49%), Gaps = 16/185 (8%)
Frame = +3
Query: 87 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGE---GAVQFYERAE 257
MA K I ++ SVK+ QKIT++M+MV+A+K + + + ++RPY E + +A
Sbjct: 1 MAGAKEIRTKIASVKSTQKITKAMEMVAASKMRKTQERMSSSRPYSETIRNVISHVSKAT 60
Query: 258 V------TPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENIKV--ICVGD 413
+ + K + +++DRGLCG ++ + K + N + E +++ V +G
Sbjct: 61 IGYKHPFLVDREVKKVGMIVVSTDRGLCGGLNVNLFKTVLNEMKEWKEKDVSVQLSLIGS 120
Query: 414 KSRGILQRLYGKHIISVANEIGRLPPTFLDASQLATAI--LTSGYEFGSGKI---IYNKF 578
KS Q L G I++ + IG P QL ++ + Y+ G + +YNKF
Sbjct: 121 KSINFFQSL-GIKILTQDSGIGDTP----SVEQLIGSVNSMIDAYKKGEVDVVYLVYNKF 175
Query: 579 KSVVS 593
+ +S
Sbjct: 176 INTMS 180
>UniRef50_A7QZP5 Cluster: Chromosome chr10 scaffold_282, whole
genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr10 scaffold_282, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 340
Score = 64.9 bits (151), Expect = 2e-09
Identities = 58/181 (32%), Positives = 85/181 (46%), Gaps = 16/181 (8%)
Frame = +3
Query: 96 LKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYERAEVTPPED 275
L+ + R+ SVKN QKIT++MK+V+AAK RA+ + RP+ E V+ D
Sbjct: 52 LRELRERIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVLYNINEQLQTD 111
Query: 276 D-----------PKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSE--PGAENIKVICVGDK 416
D K V +T DRGLCG + + K +R++E + VI VG K
Sbjct: 112 DIDVPLTKVRPVKKVALVVVTGDRGLCGGFNNAIIKKAESRIAELKDLGLDYTVISVGKK 171
Query: 417 SRG-ILQRLYGKHIISVANEIGRLPPTFLDASQLATAI--LTSGYEFGSGKIIYNKFKSV 587
L+R Y + E G L PT +A +A + L E +++Y KF S+
Sbjct: 172 GNSYFLRRPYIP--VDKFLEGGSL-PTAKEAQTIADDVFSLFVSEEVDKVELLYTKFVSL 228
Query: 588 V 590
V
Sbjct: 229 V 229
>UniRef50_Q67TB8 Cluster: ATP synthase gamma chain; n=4;
Firmicutes|Rep: ATP synthase gamma chain -
Symbiobacterium thermophilum
Length = 288
Score = 64.9 bits (151), Expect = 2e-09
Identities = 53/185 (28%), Positives = 89/185 (48%), Gaps = 12/185 (6%)
Frame = +3
Query: 99 KAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYER-----AEVT 263
KA+ R+++VK+ Q+IT++MKMV AAK RA+ ++ ARPY + R A +
Sbjct: 6 KAVQRRIRAVKSTQQITKAMKMVDAAKLRRAQEKVQNARPYSRELAKTLGRLIQAGAGID 65
Query: 264 PP------EDDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENIKVICVGDKSRG 425
P E P +V +T+DRGL GA + V + L + + K+I +G K R
Sbjct: 66 HPLLHRRTEGTPTVAYVLLTADRGLAGAFNINVIRKAHQALQKE-SRPTKLITIGRKGRD 124
Query: 426 ILQRLYGKHIISVANEIGRLPPTFLDASQLATAI-LTSGYEFGSGKIIYNKFKSVVSYAQ 602
+ + ++ N +G L S L+ + L E ++IY +F + V+
Sbjct: 125 YFVKRKIQPVLEFVN-LGDNITFALARSVLSKIVDLYLSGEVDEVRVIYTEFVNAVTQRP 183
Query: 603 SDLPL 617
++ L
Sbjct: 184 KEMQL 188
>UniRef50_Q8XID3 Cluster: ATP synthase gamma chain; n=12;
Clostridium|Rep: ATP synthase gamma chain - Clostridium
perfringens
Length = 283
Score = 64.5 bits (150), Expect = 2e-09
Identities = 57/181 (31%), Positives = 83/181 (45%), Gaps = 14/181 (7%)
Frame = +3
Query: 90 ATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYERA----- 254
A L I R+KS+KN +KIT++M +V+ +K +A + L Y +
Sbjct: 4 AGLLEIKRRIKSIKNTRKITKAMGLVATSKLRKARQKLTENNQYFSSLDEIARELIGSLN 63
Query: 255 ----EVTPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENIKVICVGDKSR 422
+ P D+PK+L + + SD GLCG + + +R+ E ENI+ + VG K
Sbjct: 64 SNNNPLLKPNDNPKKLIILLASDSGLCGGFNGNTAAFVRDNY-ENNLENIEAVVVGKK-- 120
Query: 423 GILQRLYGKHIISVANEIGRL--PPTFLDASQL---ATAILTSGYEFGSGKIIYNKFKSV 587
GI K+ IS E L P DAS + A T G FG ++Y KF S
Sbjct: 121 GI--HYVKKNKISTLAEYVDLGDTPNVGDASTIVNKAVKEFTDG-NFGEVSLVYTKFFSP 177
Query: 588 V 590
V
Sbjct: 178 V 178
>UniRef50_Q1AVH8 Cluster: ATP synthase gamma chain; n=1; Rubrobacter
xylanophilus DSM 9941|Rep: ATP synthase gamma chain -
Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129)
Length = 290
Score = 63.3 bits (147), Expect = 5e-09
Identities = 41/114 (35%), Positives = 68/114 (59%), Gaps = 10/114 (8%)
Frame = +3
Query: 87 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQ----FYERA 254
MA+L+ + +++SVKNI K+T +++ VSA K+ +AE +K ARPY E + +A
Sbjct: 1 MASLRDLKRQIQSVKNIAKVTDALQAVSAVKFRKAEARVKQARPYAENMEEVMRAIASKA 60
Query: 255 EVTPP----EDDPKQLFVA-MTSDRGLCGAVHTGV-SKVIRNRLSEPGAENIKV 398
P + +++ VA +TSDRGLCG+ + V + +R R + GAE ++V
Sbjct: 61 STRNPMLAGREQVRRVAVATLTSDRGLCGSFNAQVLRRTVRFR-EQQGAEALQV 113
>UniRef50_A0LLF9 Cluster: ATP synthase gamma chain; n=1;
Syntrophobacter fumaroxidans MPOB|Rep: ATP synthase
gamma chain - Syntrophobacter fumaroxidans (strain DSM
10017 / MPOB)
Length = 292
Score = 63.3 bits (147), Expect = 5e-09
Identities = 60/210 (28%), Positives = 102/210 (48%), Gaps = 22/210 (10%)
Frame = +3
Query: 87 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYER-AE-- 257
MATL+ I ++ +VK +IT++M MV+AAK A+++++ PY E + ER AE
Sbjct: 1 MATLRDIKRKIDAVKKTSQITKAMNMVAAAKLRGAQQNMERFHPYAEKFNEVIERLAEGV 60
Query: 258 --------VTPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAE--NIKVICV 407
+TP E+ K V +T+DRGLCG+ + + + L AE +++ V
Sbjct: 61 EDAGQYVLLTPREEVKKIELVLVTADRGLCGSFNNNLIVMAERFLKAKQAEGCQVRLTAV 120
Query: 408 GDKSRGILQRL---YGKHIISVANEIGRLPPTFLDASQLATAILTSGYEFGSGK---IIY 569
G K +R K + + N+ P++ DA+ L ++ +E G +IY
Sbjct: 121 GRKGGDYFRRRTFEVRKRMTGLLNK-----PSYEDAAVLGRELIEQ-FEIGECDEVYVIY 174
Query: 570 NKFKSVV---SYAQSDLPLYTKKSIESASK 650
++F S+V + LP+ K E+ K
Sbjct: 175 SRFLSMVRQQATLMKLLPIAPAKKTEAEEK 204
>UniRef50_Q1FG24 Cluster: ATP synthase gamma chain; n=1; Clostridium
phytofermentans ISDg|Rep: ATP synthase gamma chain -
Clostridium phytofermentans ISDg
Length = 291
Score = 62.9 bits (146), Expect = 6e-09
Identities = 49/181 (27%), Positives = 91/181 (50%), Gaps = 11/181 (6%)
Frame = +3
Query: 87 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAV-----QFYER 251
MA+++ I R +S+++ +IT++MK+VS K +A+ + A+PY + +
Sbjct: 1 MASMRDIKRRKESIQSTGQITKAMKLVSTVKLQKAKSKAENAKPYFDHMYDTVLNMLRKS 60
Query: 252 AEVTPP----EDDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENIKVICVGDKS 419
++ P K+ + +TS+RGL G ++ + K++ + S+ E+ V VG K
Sbjct: 61 GNISHPYLSAGKSNKKAIIVITSNRGLAGGYNSNILKLVMS--SDINKEDAVVYAVGRKG 118
Query: 420 RGILQRLYGKHIISVANEIGRLPPTFLDASQLATAILTS--GYEFGSGKIIYNKFKSVVS 593
+ L R G HI +E+ P + DA ++ A+L + E G + Y FK+ VS
Sbjct: 119 KEALAR-RGYHIAKDYSEVMN-APIYKDAIEIGKAVLDAFVADEVGEIYLAYTSFKNTVS 176
Query: 594 Y 596
+
Sbjct: 177 H 177
>UniRef50_Q8RC16 Cluster: ATP synthase gamma chain; n=1;
Thermoanaerobacter tengcongensis|Rep: ATP synthase gamma
chain - Thermoanaerobacter tengcongensis
Length = 295
Score = 62.5 bits (145), Expect = 9e-09
Identities = 38/114 (33%), Positives = 66/114 (57%), Gaps = 15/114 (13%)
Frame = +3
Query: 105 ISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPY---------------GEGAVQ 239
I++R+KSVK ++KIT++M ++SA+K+ +A+ L RPY GE +
Sbjct: 6 IALRIKSVKEVRKITRAMYLISASKFQKAKGMLDRVRPYYYRVQTVMKDILLHTGEVTSR 65
Query: 240 FYERAEVTPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENIKVI 401
+ E+ +V P + D +++F+ +T D+GLCGA + V K + A N+KV+
Sbjct: 66 YLEKKDV-PEKQDKRKVFLIVTGDKGLCGAYNHNVIKASIELIKNEKA-NLKVV 117
>UniRef50_Q5ENU6 Cluster: ATP synthase gamma chain; n=1; Isochrysis
galbana|Rep: ATP synthase gamma chain - Isochrysis
galbana
Length = 299
Score = 62.1 bits (144), Expect = 1e-08
Identities = 52/181 (28%), Positives = 93/181 (51%), Gaps = 15/181 (8%)
Frame = +3
Query: 96 LKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGE-------GAVQFYERA 254
++ + R+ SVKN +KIT +M++V+AAK RA+ +RP+ E G ++
Sbjct: 39 IRELRARVGSVKNTKKITSAMRLVAAAKVRRAQEACLRSRPFSETLERILGGLLKRLSTE 98
Query: 255 EVTPP---EDDPKQL-FVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENIK--VICVGDK 416
+ P + + K + + + DRGLCG+ ++ K R++E A+ +K +I VG K
Sbjct: 99 ALDIPLLQQREAKTVGLLVIRGDRGLCGSYNSAAIKKTEARIAELTAQGVKAELILVGGK 158
Query: 417 SRGILQRLYGKHIISVANEIGRLPPTFLDASQLATAILTSGY--EFGSGKIIYNKFKSVV 590
+R + A + G PT A+++A+ +L+S Y E ++IY F S++
Sbjct: 159 GSTYFKRRATP--VRKAMQCGG-APTAAMATEIASELLSSYYAGELDRVELIYTSFISMI 215
Query: 591 S 593
S
Sbjct: 216 S 216
>UniRef50_Q01909 Cluster: ATP synthase gamma chain 2, chloroplast
precursor; n=20; cellular organisms|Rep: ATP synthase
gamma chain 2, chloroplast precursor - Arabidopsis
thaliana (Mouse-ear cress)
Length = 386
Score = 62.1 bits (144), Expect = 1e-08
Identities = 55/182 (30%), Positives = 85/182 (46%), Gaps = 15/182 (8%)
Frame = +3
Query: 90 ATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQ-FYERAEVTP 266
A ++ + R+ SVKN QKIT++M++V+AA+ RA+ + RP+ E V+ Y +
Sbjct: 61 AGIRELRERIDSVKNTQKITEAMRLVAAARVRRAQDAVIKGRPFTETLVEILYSINQSAQ 120
Query: 267 PEDDPKQL----------FVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENIK--VICVG 410
ED L V +T D+GLCG + V+K R+ E I VI VG
Sbjct: 121 LEDIDFPLSIVRPVKRVALVVVTGDKGLCGGFNNAVTKKATLRVQELKQRGIDCVVISVG 180
Query: 411 DKSRGILQRLYGKHIISVANEIGRLPPTFLDASQLATAI--LTSGYEFGSGKIIYNKFKS 584
K R + + E G + PT +A +A + L E +++Y KF S
Sbjct: 181 KKGNAYFSR-RDEFDVDKCIEGGGVFPTTKEAQVIADDVFSLFVSEEVDKVELVYTKFVS 239
Query: 585 VV 590
+V
Sbjct: 240 LV 241
>UniRef50_Q1CX34 Cluster: ATP synthase gamma chain; n=4;
Bacteria|Rep: ATP synthase gamma chain - Myxococcus
xanthus (strain DK 1622)
Length = 294
Score = 61.7 bits (143), Expect = 1e-08
Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 19/206 (9%)
Frame = +3
Query: 87 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYERAEVTP 266
MA+L+ I R++SVKN ++IT++MKMVSAAK +A+ + AARPY Q
Sbjct: 1 MASLRDIRKRIRSVKNTRQITKAMKMVSAAKLRKAQDGILAARPYATMLDQIIADLSARA 60
Query: 267 PEDD-----------PKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSE-PGAENIKVICVG 410
++ + V +TSDRGL G ++ V + L E E+I++ VG
Sbjct: 61 GDESLSHPLLTARPVKRVELVLLTSDRGLAGGFNSNVIRRANRFLYENTNLESIRLSTVG 120
Query: 411 DKSRGILQRLYGKHIISVANEIGRLPP--TFLDASQLATAILTS--GYEFGSGKIIYNKF 578
K R G++I + G L + A+ +A ++ S E + I+YN+F
Sbjct: 121 RKGNDFF-RNRGQNI---RKDFGGLYQRLNYRAAADVAEELVASYLNGEVDAVHIVYNEF 176
Query: 579 KSVVSY---AQSDLPLYTKKSIESAS 647
+ +S LPL T + + AS
Sbjct: 177 VTAISQTVKVAQLLPLQTLGTPDQAS 202
>UniRef50_Q8A9U6 Cluster: ATP synthase gamma chain; n=8;
Bacteroidales|Rep: ATP synthase gamma chain -
Bacteroides thetaiotaomicron
Length = 298
Score = 61.7 bits (143), Expect = 1e-08
Identities = 57/206 (27%), Positives = 101/206 (49%), Gaps = 18/206 (8%)
Frame = +3
Query: 87 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYER-AEVT 263
MA+LK + R+ SVK+ +KIT +MKMV++AK +A+ ++ PY +
Sbjct: 1 MASLKEVKTRINSVKSTRKITSAMKMVASAKLHKAQGAIENMLPYERKLNKILTNFLSAD 60
Query: 264 PPEDDP--------KQLFVAMTSDRGLCGAVHTGVSKVIRNRLSE---PGAENIKVICVG 410
P + P + VA +S+ LCGA + V K++ + E G +NI + VG
Sbjct: 61 LPVESPYIKAREVKRVAIVAFSSNTSLCGAFNANVIKMLLQTVGEFRTLGQDNILIFPVG 120
Query: 411 DKSRGILQRLYGKHIISVANEIGRLPPTFLDASQLATAIL---TSGYEFGSGKIIYNKFK 581
K ++RL G + + P++ +AS+LA ++ SG E ++IY+ FK
Sbjct: 121 KKVDEAVKRL-GFEPQETSPTLSD-KPSYQEASELAHRLMEMYVSG-EIDRVELIYHHFK 177
Query: 582 SV---VSYAQSDLPLYTKKSIESASK 650
S+ + ++ LP+ + ++ K
Sbjct: 178 SMGVQILLRETYLPIDLTRVVDEEEK 203
>UniRef50_A1IFD5 Cluster: ATP synthase gamma chain; n=2;
Deltaproteobacteria|Rep: ATP synthase gamma chain -
Candidatus Desulfococcus oleovorans Hxd3
Length = 298
Score = 61.3 bits (142), Expect = 2e-08
Identities = 37/114 (32%), Positives = 65/114 (57%), Gaps = 10/114 (8%)
Frame = +3
Query: 87 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGE------GAVQFYE 248
M +LK + +++K VK +KIT++M MV+ +K A+ +++A RPY E G++
Sbjct: 1 MPSLKEVQLKIKGVKQTKKITKAMNMVATSKLRGAQTNMEAFRPYAEKFAEVLGSLAAKA 60
Query: 249 RAEVTP---PEDDPKQLFVAM-TSDRGLCGAVHTGVSKVIRNRLSEPGAENIKV 398
E +P P++ K++ V + TSDRGLCG +T + ++ L + I+V
Sbjct: 61 GEETSPLLVPKESVKRVNVVLCTSDRGLCGGFNTNLVRMANAYLKRCQEKEIEV 114
>UniRef50_Q8RGE1 Cluster: ATP synthase gamma chain; n=5;
Fusobacteriaceae|Rep: ATP synthase gamma chain -
Fusobacterium nucleatum subsp. nucleatum
Length = 282
Score = 61.3 bits (142), Expect = 2e-08
Identities = 47/184 (25%), Positives = 91/184 (49%), Gaps = 14/184 (7%)
Frame = +3
Query: 87 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGE------GAVQFYE 248
M +K I R+KSV++ ++IT +M++VS K+ R + + +RPY E G +
Sbjct: 1 MPGMKEIKSRIKSVQSTRQITNAMEIVSTTKFKRYSKLVTESRPYEESMRKILGNIASGV 60
Query: 249 RAEVTPPEDDPKQL----FVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENIKVICVGDK 416
+ E P D K++ + +TSDRGLCG+ ++ K + + + +NI +I G K
Sbjct: 61 KNEGHPLFDGRKEVKSIAIIVITSDRGLCGSFNSSTLKELEKLVEKNKNKNITIIPFGRK 120
Query: 417 SRGILQRLYGKHIISVANEIGRLPPTFLD--ASQLATAILT--SGYEFGSGKIIYNKFKS 584
+ + K + ++ P ++ A +++ ++ + + + +IYNKF S
Sbjct: 121 AIDFIT----KRNYEFSESFSKISPDEMNKIAGEISEEVVEKYNNHIYDEVYVIYNKFIS 176
Query: 585 VVSY 596
+ Y
Sbjct: 177 ALRY 180
>UniRef50_Q7VQV7 Cluster: ATP synthase gamma chain; n=36;
Gammaproteobacteria|Rep: ATP synthase gamma chain -
Blochmannia floridanus
Length = 288
Score = 60.9 bits (141), Expect = 3e-08
Identities = 47/185 (25%), Positives = 96/185 (51%), Gaps = 16/185 (8%)
Frame = +3
Query: 87 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYERAEVTP 266
M+++K + +++S++NIQK++++M+M++A+K +A+R + ++PY + + + +
Sbjct: 1 MSSIKEVREKIESIRNIQKLSKAMEMIAASKMKKAQRLMLVSQPYTKAIRKVIDHISLGK 60
Query: 267 PEDDPKQL---------FVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAEN--IKVICVGD 413
E L + ++SDRGL G ++ V +++ N +S N IK+ +G
Sbjct: 61 LEYRHVYLMNREVRSVGYWVISSDRGLAGGLNVNVFRMLLNDISRWNKLNVTIKLAIIGS 120
Query: 414 KSRGILQRLYGKHIISVANEIGRLPPTFLDASQLATAILTSGYEFGSGKI-----IYNKF 578
K+ + I+S + IG +P SQL + T + +G++ IYNKF
Sbjct: 121 KAISFFNCIDPNMIVSYVSGIGDVP----KMSQLIGLVGTMLQLYCNGQVDRLYLIYNKF 176
Query: 579 KSVVS 593
+ +S
Sbjct: 177 INTLS 181
>UniRef50_Q5GRT1 Cluster: ATP synthase gamma chain; n=3;
Wolbachia|Rep: ATP synthase gamma chain - Wolbachia sp.
subsp. Brugia malayi (strain TRS)
Length = 290
Score = 60.5 bits (140), Expect = 3e-08
Identities = 46/177 (25%), Positives = 89/177 (50%), Gaps = 13/177 (7%)
Frame = +3
Query: 87 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYER----- 251
M +LK +S+R+K+++++QK T+ M+MVSAAK ++++ L ++ Y
Sbjct: 1 MKSLKELSLRIKNIRSVQKTTKIMQMVSAAKLLQSQKKLSNSKLYISKLHDIISSIMSSA 60
Query: 252 -----AEVTPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSE--PGAENIKVICVG 410
A++ D+ L + SDRGLCG+ ++ ++K + +++ ++ + ++ +G
Sbjct: 61 DQELLAKIFTTGDNDSYLVFIIASDRGLCGSFNSSIAKSSQEYVNKLIASSKKVDIVFLG 120
Query: 411 DKSRGI-LQRLYGKHIISVANEIGRLPPTFLDASQLATAILTSGYEFGSGKIIYNKF 578
K+ I R K I+ + N G T L ++ S Y+ K+ YNKF
Sbjct: 121 KKAFDIGKNRFDSKSILKIENSKG---ITLKRVEALVDSMDLSKYD--RIKVFYNKF 172
>UniRef50_Q2GDH8 Cluster: ATP synthase F1, gamma subunit; n=1;
Neorickettsia sennetsu str. Miyayama|Rep: ATP synthase
F1, gamma subunit - Neorickettsia sennetsu (strain
Miyayama)
Length = 269
Score = 59.7 bits (138), Expect = 6e-08
Identities = 34/98 (34%), Positives = 59/98 (60%), Gaps = 6/98 (6%)
Frame = +3
Query: 87 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQ----FYERA 254
M+ LK++ +R+ SV + +KIT+ M+M++ +K +A L AAR Y + ++ F +
Sbjct: 1 MSDLKSLLLRINSVNSTKKITRVMQMIATSKLKQARISLMAARRYRDEVLRSLEIFGKFR 60
Query: 255 EVTPPEDDPKQ--LFVAMTSDRGLCGAVHTGVSKVIRN 362
E P D P Q + VA ++DRGLCG ++ + K +R+
Sbjct: 61 EERPSSDAPTQGDVLVAFSADRGLCGGYNSSLIKHLRS 98
>UniRef50_P37810 Cluster: ATP synthase gamma chain; n=61;
Firmicutes|Rep: ATP synthase gamma chain - Bacillus
subtilis
Length = 290
Score = 59.7 bits (138), Expect = 6e-08
Identities = 51/186 (27%), Positives = 87/186 (46%), Gaps = 15/186 (8%)
Frame = +3
Query: 81 RNMATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGE---------GA 233
+++A+L+ I R+ S K +IT++M+MVSAAK RAE + K+ PY + G
Sbjct: 2 KSLASLRDIKSRITSTKKTSQITKAMQMVSAAKLNRAENNAKSFVPYMDKIQEVVSNVGR 61
Query: 234 VQFYERAEVTPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSE--PGAENIKVICV 407
V + + + K ++ +TSDRGL GA ++ V + + E + VI +
Sbjct: 62 VSGNVKHPMLLSREVKKTAYLVITSDRGLAGAFNSSVLRSAYQAMQERHQSKDEYAVIAI 121
Query: 408 GDKSRGILQRLYGKHIISVANEIGRL--PPTFLDASQLATAILTSGYE--FGSGKIIYNK 575
G R + K I + +E+ L TF + LA + + F ++YN
Sbjct: 122 GRVGRD----FFKKREIPIISELTGLGDEVTFTEIKDLARQTIQMFIDGAFDELHLVYNH 177
Query: 576 FKSVVS 593
F S ++
Sbjct: 178 FVSAIT 183
>UniRef50_A5UQN4 Cluster: ATP synthase gamma chain; n=5; Chloroflexi
(class)|Rep: ATP synthase gamma chain - Roseiflexus sp.
RS-1
Length = 290
Score = 59.3 bits (137), Expect = 8e-08
Identities = 51/179 (28%), Positives = 93/179 (51%), Gaps = 15/179 (8%)
Frame = +3
Query: 87 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPY--------GEGAVQF 242
M + + I R++SVKN+ +IT++M+MVSA+K RA+R++ A RPY GE +
Sbjct: 1 MPSTREIRRRIRSVKNLAQITRAMEMVSASKMRRAQRNVLATRPYADRLLDVMGELTGRA 60
Query: 243 YERAEVTPPEDDPKQLFVAM---TSDRGLCGAVHTGV-SKVIRNRLSEPGAEN-IKVICV 407
T E P VA+ T DRGL G++ V + R L E ++ ++V+ +
Sbjct: 61 VGMRRGTLLEVRPVVQGVALIVVTPDRGLAGSLVANVLRRASRFILDEQEKKHTVEVLAI 120
Query: 408 GDKSRGILQRLYGKHIISVANEIGRLPPTFLDASQLATAILTS--GYEFGSGKIIYNKF 578
G K R + R + +++++ ++G P D ++T ++ G + ++Y++F
Sbjct: 121 GKKGRDFMVRTH-QNLVAEVTKLGD-HPRLTDILGISTHVINGFLGGRYDEVYVLYSQF 177
>UniRef50_Q6AQ11 Cluster: ATP synthase gamma chain; n=4;
Deltaproteobacteria|Rep: ATP synthase gamma chain -
Desulfotalea psychrophila
Length = 290
Score = 58.8 bits (136), Expect = 1e-07
Identities = 56/204 (27%), Positives = 99/204 (48%), Gaps = 16/204 (7%)
Frame = +3
Query: 87 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYER----- 251
M +LK + ++ VK +IT++M MV+A++ A+ +++ RPY +
Sbjct: 1 MPSLKEVKTKITGVKKTSQITKAMNMVAASRLRGAQDKMESFRPYASKFSEAMSNLSGGG 60
Query: 252 -AEVTPPED--DPKQL-FVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENIKV--ICVGD 413
P D D K + + +TSDRGLCG+ + V K+ ++++ AE KV IC+G
Sbjct: 61 NTNAFPLMDVRDVKTVELIVVTSDRGLCGSFNANVVKLTEKKMAQYRAEGKKVSLICIGK 120
Query: 414 KSRGILQRLYGKHIISVANEIGRLPPTFLDASQLATAILTSGYEFGSGK--IIYNKFKSV 587
K +L R G + ++ + + +A ++A+ + + + + K IIY FKSV
Sbjct: 121 KGYQLL-RKSGAVRENYSDIMAHF--SINNAREIASDVADNFLKGTADKVEIIYGAFKSV 177
Query: 588 ---VSYAQSDLPLYTKKSIESASK 650
A+ LP+ S E A +
Sbjct: 178 AVQAPVAEDLLPIQPVVSSEPAGE 201
>UniRef50_O67829 Cluster: ATP synthase gamma chain; n=1; Aquifex
aeolicus|Rep: ATP synthase gamma chain - Aquifex
aeolicus
Length = 291
Score = 58.8 bits (136), Expect = 1e-07
Identities = 45/152 (29%), Positives = 76/152 (50%), Gaps = 11/152 (7%)
Frame = +3
Query: 105 ISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFY-ERAEVTPPEDDP 281
I +++ +KN ++IT +MK+VSAAK +A+ + A+RPY E + A ED+P
Sbjct: 9 IKRKIQGIKNTKRITNAMKVVSAAKLRKAQELVYASRPYSEKLYELVGHLAAHVDTEDNP 68
Query: 282 --------KQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENIKV--ICVGDKSRGIL 431
+ +T+DRGL GA ++ V + N + E + +KV I VG K
Sbjct: 69 LFDVREERNVDVILVTADRGLAGAFNSNVIRTAENLIREKEEKGVKVSLILVGRKGFQYF 128
Query: 432 QRLYGKHIISVANEIGRLPPTFLDASQLATAI 527
+ G ++I +E+ R F A ++A +
Sbjct: 129 TK-RGYNVIKGYDEVFRKTVNFNVAKEVAEIV 159
>UniRef50_Q6KI81 Cluster: ATP synthase gamma chain; n=1; Mycoplasma
mobile|Rep: ATP synthase gamma chain - Mycoplasma mobile
Length = 286
Score = 57.6 bits (133), Expect = 2e-07
Identities = 55/206 (26%), Positives = 104/206 (50%), Gaps = 19/206 (9%)
Frame = +3
Query: 87 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYER-AEVT 263
MA L+ +S RLKSVK +KIT++M++V+A+K RA+ + + Y + ++ A T
Sbjct: 1 MAELQKLSSRLKSVKVTRKITKAMELVAASKIRRAKESFFSNKEYFQIIQDIFDNLASKT 60
Query: 264 PPEDDPKQ------------LFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENIKVICV 407
KQ L++ + SD GLCGA ++ ++K I+ + K+ +
Sbjct: 61 EQIFLKKQMKFDKENNTNSILYIVINSDLGLCGAYNSSIAKEIKKEIKSKD----KLFLI 116
Query: 408 GDKSRGILQRLYGKHIISVANEIGRLPPTFLDASQLATAILT--SGYEFGSGKIIYNKFK 581
G K G+L K I+ +++ + + + +++ IL+ ++ S KI+Y K+
Sbjct: 117 GKK--GLLFLGKFKTQITNLDKVKEISTNYKNIKKISEKILSMFKSGDYKSIKIVYTKYV 174
Query: 582 SVVSY---AQSDLP-LYTKKSIESAS 647
+ +Y + LP L ++K+I A+
Sbjct: 175 NAFTYLPTIKHALPILKSEKNINEAT 200
>UniRef50_Q5NIK4 Cluster: ATP synthase gamma chain; n=10;
Francisella tularensis|Rep: ATP synthase gamma chain -
Francisella tularensis subsp. tularensis
Length = 298
Score = 57.2 bits (132), Expect = 3e-07
Identities = 39/139 (28%), Positives = 75/139 (53%), Gaps = 11/139 (7%)
Frame = +3
Query: 87 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGA---VQFYERAE 257
M+ + I +++SVKN QKIT +M++V+A+K A + RPY E A ++ A
Sbjct: 1 MSNAREIRSKVQSVKNTQKITGAMELVAASKMRGAIVKMNNVRPYVESANTIIKNVTAAS 60
Query: 258 VTPP-----EDDPKQL-FVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENIKV-ICV-GD 413
+ P + D K++ ++ +++DRGLCG ++ + K + + + + V +CV G
Sbjct: 61 IDYPNPYLFDRDVKRVGYIVISTDRGLCGGLNINLFKHVLKEIKNNIEDRVGVDVCVIGS 120
Query: 414 KSRGILQRLYGKHIISVAN 470
K+ +L +I++ A+
Sbjct: 121 KAENFFAKLKDVNIVATAH 139
>UniRef50_Q3ZZT8 Cluster: ATP synthase gamma chain; n=3;
Dehalococcoides|Rep: ATP synthase gamma chain -
Dehalococcoides sp. (strain CBDB1)
Length = 285
Score = 56.8 bits (131), Expect = 4e-07
Identities = 48/170 (28%), Positives = 83/170 (48%), Gaps = 11/170 (6%)
Frame = +3
Query: 87 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFY------- 245
MA L+ I R++SV+NI KIT++M+M++A+K +A+ A RPY E +
Sbjct: 1 MANLRIIKRRIRSVRNIAKITRAMEMIAASKMKKAQERGLAGRPYSEKITEVIAALAALP 60
Query: 246 ERAEVTPP--EDDP--KQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENIKVICVGD 413
+ E+ P E P K + +T DRG CG + +++ + E + + VG
Sbjct: 61 QSGEILHPLLERRPVKKIAILHITPDRGQCGGLVANINRKTGTFIMEQKVP-VSAVVVGR 119
Query: 414 KSRGILQRLYGKHIISVANEIGRLPPTFLDASQLATAILTSGYEFGSGKI 563
K ++R+ + N +G P +LD ++ I+ +F SG+I
Sbjct: 120 KGVDFIRRIRQQMRAEFIN-LGD-KPDYLDTLPISRVIMD---DFMSGEI 164
>UniRef50_A5KSC8 Cluster: ATP synthase gamma chain; n=1; candidate
division TM7 genomosp. GTL1|Rep: ATP synthase gamma
chain - candidate division TM7 genomosp. GTL1
Length = 288
Score = 56.8 bits (131), Expect = 4e-07
Identities = 48/177 (27%), Positives = 85/177 (48%), Gaps = 13/177 (7%)
Frame = +3
Query: 87 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYER-AEVT 263
M + + + R++SVKN ++IT++M++V+A+K RA+ +A+R Y A + R A
Sbjct: 1 MPSTRQLKTRIRSVKNTRQITKAMELVAASKMRRAQEATQASRDYALVAREVLNRLAAAG 60
Query: 264 PPEDDP--------KQLFVAMTSDRGLCGAVHTGVSK---VIRNRLSEPGAENIKVICVG 410
P +L + +TSD+GL GA + K +R + G + K + +G
Sbjct: 61 EVHKHPLFTLREVKNRLIILITSDKGLAGAYNANAIKRYLELRRDDKKAGVAS-KTVAIG 119
Query: 411 DKSRGILQRLYGKHIISVANEIGRLPPTFLDASQLATAI-LTSGYEFGSGKIIYNKF 578
K L RL I V ++ P + +++AI L + E + +IY K+
Sbjct: 120 HKGAQFLSRLKDVDIAGVYEDLPDKPTGGEIRAVMSSAIELFTNNEVDAVDVIYTKY 176
>UniRef50_Q2LQZ6 Cluster: ATP synthase gamma chain; n=1; Syntrophus
aciditrophicus SB|Rep: ATP synthase gamma chain -
Syntrophus aciditrophicus (strain SB)
Length = 291
Score = 56.4 bits (130), Expect = 6e-07
Identities = 49/180 (27%), Positives = 92/180 (51%), Gaps = 13/180 (7%)
Frame = +3
Query: 87 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYERAEV-T 263
MA LK I ++ +V+ ++IT++M MV+A+K+ ++ +++ RPY ++ V
Sbjct: 1 MAALKDIKRKVAAVEKTKQITRAMNMVAASKFRTSQTRMESFRPYAMKFMEVLSSLAVRV 60
Query: 264 PPEDDP-------KQL-FVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENIKV--ICVGD 413
P+ P K++ V+M+SDRGLCG ++ + K + E AE ++V +G
Sbjct: 61 SPDAHPLLAAREAKRIRVVSMSSDRGLCGGFNSSLIKSTERFVREKIAEGLEVDLTPIGR 120
Query: 414 KSRGILQRLYGKHIISVANEIGRLPPTFLDASQLATAILTS--GYEFGSGKIIYNKFKSV 587
K R +R Y + A+ + + T A ++A ++ E+ +IYN+F +V
Sbjct: 121 KVREYFKRKYAL-VSDRADVMSKFDMTL--AVEIAEDVIDPFVNEEYDELYLIYNEFINV 177
>UniRef50_Q1KT14 Cluster: ATP synthase gamma chain; n=1; Pasteuria
ramosa|Rep: ATP synthase gamma chain - Pasteuria ramosa
Length = 258
Score = 56.4 bits (130), Expect = 6e-07
Identities = 46/193 (23%), Positives = 91/193 (47%), Gaps = 11/193 (5%)
Frame = +3
Query: 96 LKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYERA------- 254
++AI +++SV+N +IT++MKMV+A+K R++ + PY + R
Sbjct: 5 IRAIRNKIRSVENTSQITKAMKMVAASKLRRSQDRAASILPYSRMILTTINRLISDKDIK 64
Query: 255 -EVTPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENIKVICVGDKSRGIL 431
+ D + + +TSDRGL G ++ + + + L + +N ++ G K IL
Sbjct: 65 HILIDDRDIQRHGYFIITSDRGLAGGYNSSLFRTLDGELKDKNPDNYFLMSTGSKGNEIL 124
Query: 432 -QRLYGKHIISVANEIGRLPPTFLDASQLATAILT--SGYEFGSGKIIYNKFKSVVSYAQ 602
QR Y H ++ + P F D ++ + ++ ++ +++N+F S +
Sbjct: 125 PQRGYKLHDTFMSL---KDMPAFSDIDRITSDLIDFYIKQKYDRLSLLFNRFISPLVQQP 181
Query: 603 SDLPLYTKKSIES 641
LP K+I+S
Sbjct: 182 VILPFLPLKAIQS 194
>UniRef50_Q6LLG7 Cluster: ATP synthase gamma chain 1; n=10;
Gammaproteobacteria|Rep: ATP synthase gamma chain 1 -
Photobacterium profundum (Photobacterium sp. (strain
SS9))
Length = 288
Score = 56.4 bits (130), Expect = 6e-07
Identities = 40/146 (27%), Positives = 81/146 (55%), Gaps = 12/146 (8%)
Frame = +3
Query: 87 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGE------GAVQFYE 248
MA+ K I ++ SV+N QKIT++M+MV+A+K + + ++++RPY E G +
Sbjct: 1 MASAKEIRNKIGSVQNTQKITKAMEMVAASKMRKTQDAMESSRPYAETMRKVIGHIALGN 60
Query: 249 RAEVTPPED--DPKQL-FVAMTSDRGLCGAVHTGVSKVIRNRL---SEPGAENIKVICVG 410
P + + K++ ++ ++SDRGLCG ++ + K + ++ GA+ +++ VG
Sbjct: 61 LEYKHPYLEVREAKRVGYIIVSSDRGLCGGLNINLFKSAMTDIKGWADQGAD-VEMALVG 119
Query: 411 DKSRGILQRLYGKHIISVANEIGRLP 488
K+ YG ++++ + +G P
Sbjct: 120 AKATAFFNS-YGGNVVAQVSGLGDSP 144
>UniRef50_P50005 Cluster: ATP synthase gamma chain, sodium ion
specific (EC 3.6.3.15) (Na(+)- translocating ATPase
gamma chain); n=3; Clostridiales|Rep: ATP synthase gamma
chain, sodium ion specific (EC 3.6.3.15) (Na(+)-
translocating ATPase gamma chain) - Acetobacterium
woodii
Length = 300
Score = 56.0 bits (129), Expect = 7e-07
Identities = 54/195 (27%), Positives = 92/195 (47%), Gaps = 16/195 (8%)
Frame = +3
Query: 105 ISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYERAE--------- 257
I R+KSV + +IT +M++V++AK ++ + RPY E ++ R
Sbjct: 8 IKPRIKSVNSTMQITHAMELVASAKLRKSRELAEGRRPYFEAMIESIGRIVEKSGNARNI 67
Query: 258 VTPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENIKVICVGDKSRG-ILQ 434
+ K ++ +T D+GL G + V+K++ +++ EN + VG + R
Sbjct: 68 FMDQREVKKTAYIIITGDKGLAGGYNVNVAKLVEEHITD--KENAVLFTVGSRGRDHFRN 125
Query: 435 RLYGKHIISVANEIGRLPPTFLDASQLATAILTSGY---EFGSGKIIYNKFKSVVS-YAQ 602
R Y HI I P F +A ++ TAI+ G+ E+ I Y KF S ++ +AQ
Sbjct: 126 REY--HIQGEYLGISE-RPNFFNAKEV-TAIVMEGFKNGEYDEVYIAYTKFVSTITQHAQ 181
Query: 603 --SDLPLYTKKSIES 641
LPL ++ I S
Sbjct: 182 MMKLLPLSREELITS 196
>UniRef50_Q1MP34 Cluster: ATP synthase gamma chain; n=1; Lawsonia
intracellularis PHE/MN1-00|Rep: ATP synthase gamma chain
- Lawsonia intracellularis (strain PHE/MN1-00)
Length = 289
Score = 55.2 bits (127), Expect = 1e-06
Identities = 37/131 (28%), Positives = 64/131 (48%), Gaps = 12/131 (9%)
Frame = +3
Query: 87 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYERAEVTP 266
MA+LK + I++ V+ ++IT++M MV++AK A+ ++ RPY E
Sbjct: 1 MASLKDVKIKIAGVRKTKQITKAMNMVASAKLRGAQIKIEHFRPYAEKFQDVISNLATRS 60
Query: 267 PEDDPKQL----------FVAMTSDRGLCGAVHTG-VSKVIR-NRLSEPGAENIKVICVG 410
E K L F+ +TSDRGLCG +T + K + + + + IC+G
Sbjct: 61 DETVHKLLEKRTNGTSCIFILITSDRGLCGIFNTMLIIKALELAKQKTTKGKKVSFICIG 120
Query: 411 DKSRGILQRLY 443
K R +++ +
Sbjct: 121 RKGRDAIKKTH 131
>UniRef50_Q50330 Cluster: ATP synthase gamma chain; n=4;
Mycoplasma|Rep: ATP synthase gamma chain - Mycoplasma
pneumoniae
Length = 279
Score = 54.8 bits (126), Expect = 2e-06
Identities = 36/120 (30%), Positives = 68/120 (56%), Gaps = 8/120 (6%)
Frame = +3
Query: 87 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYERA---- 254
MA ++ I ++ +V++ KIT +MKMVS AK+ R ++ K + +FY+
Sbjct: 1 MAFIQEIKRKMTTVQSTIKITNAMKMVSRAKFVRFKKQFKEVNYFFN---EFYKAVGQVV 57
Query: 255 ----EVTPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENIKVICVGDKSR 422
++ P ++PK L+V M+S GLCG +T ++K+++ + +PG K+ +G K++
Sbjct: 58 LSLKKMPKPLENPKTLWVMMSSSLGLCGQHNTNMNKLLQTKF-QPGD---KIFFLGRKNQ 113
>UniRef50_A5KNF5 Cluster: ATP synthase gamma chain; n=1;
Ruminococcus torques ATCC 27756|Rep: ATP synthase gamma
chain - Ruminococcus torques ATCC 27756
Length = 294
Score = 54.4 bits (125), Expect = 2e-06
Identities = 39/126 (30%), Positives = 60/126 (47%), Gaps = 14/126 (11%)
Frame = +3
Query: 87 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAV---------- 236
MA ++ I R+ SVK+ KIT +M M+S++K T A++ L PY G
Sbjct: 1 MANIREIQSRINSVKDTMKITNAMYMISSSKMTHAKKKLADTEPYFYGLQGEISRILRHL 60
Query: 237 ----QFYERAEVTPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENIKVIC 404
Y A PE + K + +T+D+GL GA + + K+ L+ PG K+
Sbjct: 61 PDLHHGYFSARENVPEGERKIGSIVITADKGLAGAYNHNIVKLEEEILARPGIH--KLFI 118
Query: 405 VGDKSR 422
VG+ R
Sbjct: 119 VGELGR 124
>UniRef50_A7HJV8 Cluster: ATP synthase F1, gamma subunit; n=2;
Thermotogaceae|Rep: ATP synthase F1, gamma subunit -
Fervidobacterium nodosum Rt17-B1
Length = 274
Score = 53.6 bits (123), Expect = 4e-06
Identities = 51/169 (30%), Positives = 81/169 (47%), Gaps = 6/169 (3%)
Frame = +3
Query: 96 LKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYERA--EVTPP 269
L I R+ + ++++KIT++M+MVS A+ + E+ LK AR + E+ +V P
Sbjct: 6 LLQIKRRINATQSLKKITKAMEMVSTAQIKKVEKRLKMAREFLNETKNIVEKVHFDVKHP 65
Query: 270 --EDDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENIKVI-CVGDKSRGILQRL 440
+ K V + +D GLCG+ S++ + LS EN I VG K L +
Sbjct: 66 FINGEGKSALVVIGTDMGLCGSF---PSEIAKKALSLDKKENFDYIYVVGTK----LAPI 118
Query: 441 YGKH-IISVANEIGRLPPTFLDASQLATAILTSGYEFGSGKIIYNKFKS 584
+ KH I E PTF A L + ++ + K+IY KF+S
Sbjct: 119 FKKHEKIQRIYEHAYEVPTFEFAQTLISDLVLN--NVSKVKVIYGKFRS 165
>UniRef50_UPI00015BD26E Cluster: UPI00015BD26E related cluster; n=1;
unknown|Rep: UPI00015BD26E UniRef100 entry - unknown
Length = 292
Score = 53.2 bits (122), Expect = 5e-06
Identities = 44/179 (24%), Positives = 84/179 (46%), Gaps = 11/179 (6%)
Frame = +3
Query: 105 ISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQ-----FYERAEVTPP 269
I ++ +KN +IT +MK+VSAAK +A+ + ARPY + + F + P
Sbjct: 9 IKSKIAGIKNTMRITNAMKVVSAAKLRKAQEAIFKARPYSDKLYELMAHLFAHIDTYSHP 68
Query: 270 EDDPKQL----FVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENIKVICVGDKSRGILQR 437
++L V +++DRGL GA +T + K + + L ++ I + VG K+ +
Sbjct: 69 LFKRRELKNVDLVIISADRGLAGAFNTNLFKKVDSYLKSCPSQRINLHIVGKKANQYYSK 128
Query: 438 LYGKHIISVANEIGRLPPTFLDASQLATAILTSGYEFGSGKIIY--NKFKSVVSYAQSD 608
HI+S ++ + F +L +++ E + I+ N+ + +YA +
Sbjct: 129 -RSYHIVSSYQDVFKKEINFDIVKELGAKLISRYKEEETDHIVLFNNEMITKATYAPKE 186
>UniRef50_A7CR46 Cluster: ATP synthase F1, gamma subunit; n=1;
Opitutaceae bacterium TAV2|Rep: ATP synthase F1, gamma
subunit - Opitutaceae bacterium TAV2
Length = 303
Score = 53.2 bits (122), Expect = 5e-06
Identities = 49/190 (25%), Positives = 94/190 (49%), Gaps = 13/190 (6%)
Frame = +3
Query: 87 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYERAEVTP 266
M + + I R+KSVKN ++IT++M++V+A+K +A++ A RPY +
Sbjct: 1 MPSTRDIRRRIKSVKNTRQITKAMELVAASKMRKAQQAALAGRPYAQLITTMLAALAPHV 60
Query: 267 PEDDPKQL---------FVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAEN-IKVICVGDK 416
ED L + +T+D+GLCG +++ + K++ +E G + K + +G K
Sbjct: 61 EEDQHPFLVRREVKTRGILLITTDKGLCGPLNSNLFKLV----AEIGDKTPAKFVTIGRK 116
Query: 417 SRGILQRLYGKHIISVANEIGRLPPTFLDASQLATAILTSGYEFGSG---KIIYNKFKSV 587
L R +++I+ +P F ++A +L Y G+ +II+++FK+
Sbjct: 117 GAQYLARTQ-RNLIADVQVTDAVP--FAQV-RVAADLLIKAYLEGTVDTIEIIFSRFKNT 172
Query: 588 VSYAQSDLPL 617
+ LP+
Sbjct: 173 LIQTAITLPV 182
>UniRef50_Q72SY0 Cluster: ATP synthase gamma chain; n=4;
Leptospira|Rep: ATP synthase gamma chain - Leptospira
interrogans serogroup Icterohaemorrhagiae
serovarcopenhageni
Length = 286
Score = 53.2 bits (122), Expect = 5e-06
Identities = 34/122 (27%), Positives = 61/122 (50%), Gaps = 12/122 (9%)
Frame = +3
Query: 87 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYERAE--- 257
MAT + I R+ SVKN +KIT++M+MVS AK + + A+ P+ +
Sbjct: 1 MATPREIKKRINSVKNTRKITRTMEMVSTAKSKKISDRVNASHPFSNKIKELVSSLASLG 60
Query: 258 -------VTPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSE--PGAENIKVICVG 410
+ PE + +T++RGLCG ++ V+++ + ++ E N+++ VG
Sbjct: 61 GVVHSPYLRRPEKIKTVALLIITANRGLCGGYNSNVNRMAKAKIQEWKKSGVNVRLFIVG 120
Query: 411 DK 416
K
Sbjct: 121 KK 122
>UniRef50_P0ABA9 Cluster: ATP synthase gamma chain; n=59;
Bacteria|Rep: ATP synthase gamma chain - Shigella
flexneri
Length = 287
Score = 52.8 bits (121), Expect = 7e-06
Identities = 34/97 (35%), Positives = 59/97 (60%), Gaps = 9/97 (9%)
Frame = +3
Query: 87 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQF-----YER 251
MA K I ++ SV+N QKIT++M+MV+A+K +++ + A+RPY E + +
Sbjct: 1 MAGAKEIRSKIASVQNTQKITKAMEMVAASKMRKSQDRMAASRPYAETMRKVIGHLAHGN 60
Query: 252 AEVTPP--ED-DPKQL-FVAMTSDRGLCGAVHTGVSK 350
E P ED D K++ ++ +++DRGLCG ++ + K
Sbjct: 61 LEYKHPYLEDRDVKRVGYLVVSTDRGLCGGLNINLFK 97
>UniRef50_Q5ENU7 Cluster: ATP synthase gamma chain; n=1; Heterocapsa
triquetra|Rep: ATP synthase gamma chain - Heterocapsa
triquetra (Dinoflagellate)
Length = 429
Score = 52.0 bits (119), Expect = 1e-05
Identities = 49/153 (32%), Positives = 77/153 (50%), Gaps = 17/153 (11%)
Frame = +3
Query: 39 VGTQVVAVVYHQPNRNMATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARP 218
VG AV Q + A KA+ R+ SV+ K+T +M++V+AAK RA+ + +RP
Sbjct: 36 VGGSKPAVSQRQLVQRQAVDKAMKERITSVQKTGKLTDAMRLVAAAKVRRAQDGVAKSRP 95
Query: 219 YGE-------GAVQFYERA--EVTPP----EDDPKQLFVAM-TSDRGLCGAVHTGVSKVI 356
+ + G V+ + + E P D K + + M T++RGLCGA +T V K
Sbjct: 96 FSDELQGMIKGLVKKLKGSGLEAELPMLRVPDKVKNVGILMVTANRGLCGAYNTFVIKRA 155
Query: 357 RNRLSEPGAENI--KVICVGDKS-RGILQRLYG 446
R + A+ I K++ +G K +GI R G
Sbjct: 156 LARTRQLNAQGITPKLVVIGKKGVQGIKGRFGG 188
>UniRef50_Q6MAK6 Cluster: ATP synthase gamma chain; n=1; Candidatus
Protochlamydia amoebophila UWE25|Rep: ATP synthase gamma
chain - Protochlamydia amoebophila (strain UWE25)
Length = 285
Score = 52.0 bits (119), Expect = 1e-05
Identities = 34/120 (28%), Positives = 64/120 (53%), Gaps = 9/120 (7%)
Frame = +3
Query: 87 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYER-AEVT 263
MA+L+ I RL+S++NIQ++T++M+MV+A++ + + +K A+PY + +R +++T
Sbjct: 1 MASLREIRKRLQSIQNIQQLTKAMEMVAASRLHQVQIKVKQAKPYVVKLSEILDRLSQIT 60
Query: 264 PPEDDP--------KQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENIKVICVGDKS 419
P K V + +D GL G + + L E +++I VG K+
Sbjct: 61 QDIKHPLLEQREVKKVGVVIVAADMGLSGPYNKDIFSAANKFLKTYAQEQVELILVGKKA 120
>UniRef50_P33257 Cluster: ATP synthase gamma chain; n=1; Mycoplasma
gallisepticum|Rep: ATP synthase gamma chain - Mycoplasma
gallisepticum
Length = 289
Score = 52.0 bits (119), Expect = 1e-05
Identities = 39/126 (30%), Positives = 67/126 (53%), Gaps = 10/126 (7%)
Frame = +3
Query: 87 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDL-KAARPYGE-----GAV-QFY 245
MA+++ + R++S+ KIT++MKM+S K R + L K Y E GAV Y
Sbjct: 1 MASMQDLKRRMESITVTHKITKAMKMLSTVKLNRFKATLGKTKEFYQEFYEVIGAVITNY 60
Query: 246 ERAE---VTPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENIKVICVGDK 416
+ + TP K+L++ + + GLCG+ +T V K++ + L A++ ++I VG K
Sbjct: 61 NKTKPRTTTPTNQSTKRLWIVINTQLGLCGSYNTNVGKLLVSEL----AKDDEIILVGTK 116
Query: 417 SRGILQ 434
L+
Sbjct: 117 LNSFLR 122
>UniRef50_A0PUK1 Cluster: ATP synthase gamma chain AtpG; n=2;
Actinomycetales|Rep: ATP synthase gamma chain AtpG -
Mycobacterium ulcerans (strain Agy99)
Length = 304
Score = 51.2 bits (117), Expect = 2e-05
Identities = 37/122 (30%), Positives = 68/122 (55%), Gaps = 12/122 (9%)
Frame = +3
Query: 90 ATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYER----AE 257
ATL+ + R++S +I+KIT++ ++++ ++ RA+ L++ARPY + Q A
Sbjct: 3 ATLRELRGRIRSAGSIKKITKAQELIATSRIARAQARLESARPYADQITQMLTTLAADAA 62
Query: 258 VTPP----EDDPKQLFV-AMTSDRGLCGAVHTGV---SKVIRNRLSEPGAENIKVICVGD 413
+ P PK+ V ++SDRGLCGA + V S+ + + L + G + + + VG
Sbjct: 63 LDHPLLVEHPQPKRAGVLVVSSDRGLCGAYNANVFRRSEELFSLLRDEGKQPVLYV-VGR 121
Query: 414 KS 419
K+
Sbjct: 122 KA 123
>UniRef50_Q1Q3H1 Cluster: ATP synthase gamma chain; n=1; Candidatus
Kuenenia stuttgartiensis|Rep: ATP synthase gamma chain -
Candidatus Kuenenia stuttgartiensis
Length = 290
Score = 50.0 bits (114), Expect = 5e-05
Identities = 39/193 (20%), Positives = 90/193 (46%), Gaps = 15/193 (7%)
Frame = +3
Query: 87 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYERAEVTP 266
M + + I R++ + +I++IT++M+MV+A++ + E + A+R + E Q +
Sbjct: 1 MQSTREIKERIRGISSIKQITRAMEMVAASRLKKVESRVHASRTFAEKLHQMVSDLISSL 60
Query: 267 PEDDPKQLF------------VAMTSDRGLCGAVHTG-VSKVIRNRLSEPGAENIKVICV 407
P++ + F + +T+D+GLCGA + + K + R + +K+I +
Sbjct: 61 PQESAYRWFAKKESVNSPVKVILITADKGLCGAYNNNIIQKTV--RFIKENNRQVKLILI 118
Query: 408 GDKSRGILQRLYGKHII--SVANEIGRLPPTFLDASQLATAILTSGYEFGSGKIIYNKFK 581
G K+ + + I S+ + +L ++ + + E+G + + KF
Sbjct: 119 GKKANLYFSKRRDVYSIEESIPESVEKLGLDWVKSFAAKLIRDYNNLEYGELHVFFTKFH 178
Query: 582 SVVSYAQSDLPLY 620
+V+ + + L+
Sbjct: 179 TVMQSFPASIRLF 191
>UniRef50_Q8FQ21 Cluster: ATP synthase gamma chain; n=24;
Actinomycetales|Rep: ATP synthase gamma chain -
Corynebacterium efficiens
Length = 326
Score = 50.0 bits (114), Expect = 5e-05
Identities = 34/125 (27%), Positives = 63/125 (50%), Gaps = 12/125 (9%)
Frame = +3
Query: 87 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYERAEVTP 266
MA L+ + R++SV + +KIT++ ++++ ++ T+A+ + AA PY E + ER
Sbjct: 1 MANLRELRDRIRSVNSTKKITKAQELIATSRITKAQGRVAAAAPYAEEIQKVLERLASAS 60
Query: 267 PEDDP---------KQLFVAMTSDRGLCGAVHTGVSK---VIRNRLSEPGAENIKVICVG 410
D P + + ++SDRG+ G + V K + L+E G E ++ + G
Sbjct: 61 SLDHPMLREREGGKRAAVLVVSSDRGMAGGYNHNVFKKAAELEKLLAEQGYEVVRYV-TG 119
Query: 411 DKSRG 425
K G
Sbjct: 120 SKGVG 124
>UniRef50_P45824 Cluster: ATP synthase gamma chain; n=12;
Actinobacteria (class)|Rep: ATP synthase gamma chain -
Mycobacterium leprae
Length = 298
Score = 49.6 bits (113), Expect = 6e-05
Identities = 32/94 (34%), Positives = 54/94 (57%), Gaps = 9/94 (9%)
Frame = +3
Query: 90 ATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQF-----YERA 254
ATL+ + R++SV +I+KIT++ ++++ ++ RA+ L++ARPY + YE
Sbjct: 3 ATLRELRGRIRSVGSIKKITKAQELIATSRIARAQVRLESARPYAVDITRMLTTLAYEAV 62
Query: 255 EVTP---PEDDPKQLFV-AMTSDRGLCGAVHTGV 344
P PK+ V ++SDRGLCGA + V
Sbjct: 63 LDHPLLVASATPKRAGVLVVSSDRGLCGAYNANV 96
>UniRef50_A3DIM8 Cluster: ATP synthase gamma chain; n=2;
Clostridium|Rep: ATP synthase gamma chain - Clostridium
thermocellum (strain ATCC 27405 / DSM 1237)
Length = 295
Score = 49.2 bits (112), Expect = 9e-05
Identities = 32/112 (28%), Positives = 58/112 (51%), Gaps = 16/112 (14%)
Frame = +3
Query: 87 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGE------------- 227
MA + I +R+KS++ ++IT +MK++SAAK +A++ L+ A PY E
Sbjct: 1 MAHINEIKLRMKSIRETRQITNAMKLISAAKLKKAKKQLEKASPYFEKVRSTMADILLRS 60
Query: 228 GAVQ---FYERAEVTPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSE 374
G ++ F+ R E T D K+ ++ +T ++G G + + K L +
Sbjct: 61 GKIENKYFHARDEKT----DKKKAYIVITGEKGFAGGYNHNIIKFTEECLKQ 108
>UniRef50_Q7UFB6 Cluster: ATP synthase gamma chain; n=3;
Planctomycetaceae|Rep: ATP synthase gamma chain -
Rhodopirellula baltica
Length = 296
Score = 48.8 bits (111), Expect = 1e-04
Identities = 33/124 (26%), Positives = 59/124 (47%), Gaps = 10/124 (8%)
Frame = +3
Query: 87 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYER----- 251
MA +A+ R KS++NI+KIT++M++++ A+Y +A AA Y E + R
Sbjct: 1 MANARALDKRRKSIRNIRKITRTMELIATARYKKAMDRAAAATAYTEQITKIVSRLADAG 60
Query: 252 AEVTPPEDDPKQLF-----VAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENIKVICVGDK 416
+V P + ++ + + S+RGLCG + + + R+ VI
Sbjct: 61 LDVQHPLLEQREKINTTRVLVLASNRGLCGGYNASILRTALPRIKSLRESIPNVIVDASG 120
Query: 417 SRGI 428
RG+
Sbjct: 121 KRGV 124
>UniRef50_A6BF72 Cluster: ATP synthase gamma chain; n=4;
Clostridiales|Rep: ATP synthase gamma chain - Dorea
longicatena DSM 13814
Length = 300
Score = 48.4 bits (110), Expect = 1e-04
Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 15/120 (12%)
Frame = +3
Query: 87 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPY-----GEGA------ 233
MA K I R+ S++ +KIT +M ++S++K +A++ L P+ E A
Sbjct: 1 MANAKEIKERMASIEETRKITNAMYLISSSKMKQAKKKLADTEPFFYAMQAEIARILRHV 60
Query: 234 ----VQFYERAEVTPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENIKVI 401
QF++ E P E+ K ++ +T+D+GL GA + V K L +PG + V+
Sbjct: 61 PDMHSQFFDGRESIPAEER-KIGYIVVTADKGLAGAYNHNVIKATEELLKKPGKHKLFVL 119
>UniRef50_A5IYE4 Cluster: ATP synthase gamma chain; n=1; Mycoplasma
agalactiae|Rep: ATP synthase gamma chain - Mycoplasma
agalactiae
Length = 287
Score = 48.4 bits (110), Expect = 1e-04
Identities = 35/139 (25%), Positives = 72/139 (51%), Gaps = 11/139 (7%)
Frame = +3
Query: 87 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYERAEVTP 266
M+++++I R+K+V++I+KIT +M++VS +K +A+ Y Q + +
Sbjct: 1 MSSIQSIQSRIKTVQSIRKITHAMELVSYSKLKKAKTAFDEVEKYNLLIDQTFNKIFENI 60
Query: 267 PEDDPKQ-----------LFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENIKVICVGD 413
DD K+ L++ +TS+ GL GA + V K+++ E + +I +G
Sbjct: 61 SHDDLKELMKSRNNSKSKLYIIVTSNLGLAGAYNANVIKLVK----ETVTSDDYLIIIGS 116
Query: 414 KSRGILQRLYGKHIISVAN 470
L++ Y + II++++
Sbjct: 117 YGVRALRQQYNEQIINLSD 135
>UniRef50_P56082 Cluster: ATP synthase gamma chain; n=27;
Epsilonproteobacteria|Rep: ATP synthase gamma chain -
Helicobacter pylori (Campylobacter pylori)
Length = 301
Score = 48.4 bits (110), Expect = 1e-04
Identities = 49/190 (25%), Positives = 87/190 (45%), Gaps = 21/190 (11%)
Frame = +3
Query: 87 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYE----RA 254
MA L+ I ++ SVKN QKIT +MK+VS +K +AE + +R Y ++ +
Sbjct: 1 MANLRDIRKKIGSVKNTQKITHAMKLVSTSKLRKAEEVARNSRAYALKLDAVFDDVLSKM 60
Query: 255 EVTPPEDDPKQLF-------------VAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENIK 395
+ ED + F + +T+D+GLCG +T K + +E ++IK
Sbjct: 61 KNQGIEDIQSKYFRELERLEIKKVDIIFITADKGLCGGFNTNTIKKVLACTNEYKEKDIK 120
Query: 396 VICVGDKSRGILQRLYGKHIISVANEIGRLP--PTFLDASQLATAILTSGYEFGSGK--I 563
V G +G + + I V ++I L P + + ++ + K I
Sbjct: 121 VRLRGIGKKG--NEYFSFNGIEVLDKINNLSSMPNYERVQEFMKKVVEDYLSGKTDKVII 178
Query: 564 IYNKFKSVVS 593
I+N FK++++
Sbjct: 179 IHNGFKNMIT 188
>UniRef50_Q9X1U6 Cluster: ATP synthase gamma chain; n=3;
Thermotoga|Rep: ATP synthase gamma chain - Thermotoga
maritima
Length = 273
Score = 48.0 bits (109), Expect = 2e-04
Identities = 39/168 (23%), Positives = 86/168 (51%), Gaps = 6/168 (3%)
Frame = +3
Query: 105 ISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYE--RAEVTPP--- 269
I ++ + +++ KIT++M+MV+ AK + E + + +P+ + + + AE P
Sbjct: 4 IKRKINATQSLMKITRAMEMVARAKVRKIESEYQKFKPFYDEVKRLWALVPAESLDPIFF 63
Query: 270 EDDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENIKVICVGDKSRGILQRLYGK 449
E+ + L V +TSD GLCG+ ++ + + +SE + + +I VG K+ +
Sbjct: 64 EEGNRDLIVVITSDMGLCGSFNSEILREAERVISE--SRDPHLILVGLKA---INHFKDG 118
Query: 450 HIISVANEIGRLPPTFLDASQLATAILT-SGYEFGSGKIIYNKFKSVV 590
++ + + + P F + S + IL + ++I+++FK+V+
Sbjct: 119 KVLKMYDRFYEI-PDFRNGSTIVEDILNFLDGKPARVRVIFSRFKNVL 165
>UniRef50_Q6A8C6 Cluster: ATP synthase gamma chain; n=10;
Actinomycetales|Rep: ATP synthase gamma chain -
Propionibacterium acnes
Length = 314
Score = 47.6 bits (108), Expect = 3e-04
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Frame = +3
Query: 90 ATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPY--------GEGAVQFY 245
+ L+ + R SV +KIT++M+++++++ +A+ +KAA PY A +
Sbjct: 3 SNLRELRERRNSVATTKKITRAMELIASSRIIKAQNTVKAAGPYSLELTRALSAVAAHTH 62
Query: 246 ERAEVTPPEDDPKQLFV-AMTSDRGLCGAVHTGV 344
E +T DPK+ V +TSDRGL GA + V
Sbjct: 63 EEHPLTSMNPDPKRSAVLVITSDRGLAGAYSSNV 96
>UniRef50_Q8EWY9 Cluster: ATP synthase gamma chain; n=1; Mycoplasma
penetrans|Rep: ATP synthase gamma chain - Mycoplasma
penetrans
Length = 286
Score = 47.2 bits (107), Expect = 3e-04
Identities = 47/196 (23%), Positives = 91/196 (46%), Gaps = 12/196 (6%)
Frame = +3
Query: 87 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFY------E 248
MA+L I R+K +++ KIT +MK+VS+AK + + Y + +
Sbjct: 1 MASLNEIKKRIKIIESTSKITNAMKLVSSAKLKKQKELFLNESIYYKKFYDLFTYIKSNS 60
Query: 249 RAEVTP--PEDDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENIKVICVGDKSR 422
+E+ ++ K +++A S GLCG+ + + K ++ + N ++ +G K +
Sbjct: 61 DSEILSLKKSEEGKTIWLAFFSSMGLCGSFNLNIVKELQKHIKS----NDEIWLIGKKGK 116
Query: 423 GILQRLYGKHIISVANEIGRLPPTFLDASQLATAILT---SGYEFGSGKIIYNKFKSVVS 593
+++ + IS+ E+ F +A +L + Y S K+IY+KF + +S
Sbjct: 117 NLIKSKGIEAEISLDLELDDKDINFDLFHIIAENLLAKYKNDYNIKSIKVIYSKFVNSLS 176
Query: 594 YAQSDLPLY-TKKSIE 638
+ S L K+IE
Sbjct: 177 FTPSVFSLLPLDKAIE 192
>UniRef50_A5ZMV2 Cluster: ATP synthase gamma chain; n=1;
Ruminococcus obeum ATCC 29174|Rep: ATP synthase gamma
chain - Ruminococcus obeum ATCC 29174
Length = 285
Score = 46.8 bits (106), Expect = 5e-04
Identities = 27/96 (28%), Positives = 55/96 (57%), Gaps = 9/96 (9%)
Frame = +3
Query: 96 LKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPY--------GEGAVQFYER 251
+KA+ +R+KSV++ +IT++M++V+++K +A+ + RPY + A + +
Sbjct: 5 MKAVKLRIKSVQSTMQITKAMELVASSKLRKAKERAETCRPYFTELHETLKDIARENIDF 64
Query: 252 AEVTPPE-DDPKQLFVAMTSDRGLCGAVHTGVSKVI 356
+ V E +P+ +VA+ DRGL G + + K +
Sbjct: 65 SSVYARESSNPRYCYVAIAGDRGLAGGYNANLFKCL 100
>UniRef50_Q2IA50 Cluster: ATP synthase gamma chain; n=1; Karlodinium
micrum|Rep: ATP synthase gamma chain - Karlodinium
micrum (Dinoflagellate)
Length = 300
Score = 46.8 bits (106), Expect = 5e-04
Identities = 34/112 (30%), Positives = 53/112 (47%), Gaps = 14/112 (12%)
Frame = +3
Query: 144 ITQSMKMVSAAKYTRAERDLKAARPYGEG----AVQFYERAEVTPPEDDP--------KQ 287
+T +MKMV+AAK +A + +R + EG Q ER ++ D P K
Sbjct: 1 LTATMKMVAAAKARKAAEEASGSRDFNEGIQGLVSQLTERCKLEDTRDIPLLNSRPAKKV 60
Query: 288 LFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENIKV--ICVGDKSRGILQR 437
+ +T DRGLCGA + + + R++E ++V +GDK G R
Sbjct: 61 GLLIITGDRGLCGAYNAKIIRKSEQRIAELKKIGVEVGFYGIGDKGNGYFTR 112
>UniRef50_Q9ZJ02 Cluster: ATP synthase gamma chain; n=48;
Bacilli|Rep: ATP synthase gamma chain - Streptococcus
sanguis
Length = 293
Score = 46.8 bits (106), Expect = 5e-04
Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 14/120 (11%)
Frame = +3
Query: 93 TLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFY--------- 245
+L I ++ S KN +IT +M+MVSAAK ++E K + Y + +
Sbjct: 4 SLNDIKNKIASTKNTSQITNAMQMVSAAKLGKSEEAAKNFQVYAQKVRKLVTDMLHGHEA 63
Query: 246 ERAE---VTPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSE--PGAENIKVICVG 410
E A + K ++ +TSDRGL G + + K + +E P E+ +VIC+G
Sbjct: 64 ENARHHSMLISRPVKKSAYIVITSDRGLVGGYNATILKALMELKAEYHPTGEDFEVICIG 123
>UniRef50_A6DUD9 Cluster: ATP synthase gamma chain; n=1;
Lentisphaera araneosa HTCC2155|Rep: ATP synthase gamma
chain - Lentisphaera araneosa HTCC2155
Length = 289
Score = 46.0 bits (104), Expect = 8e-04
Identities = 28/101 (27%), Positives = 51/101 (50%), Gaps = 9/101 (8%)
Frame = +3
Query: 87 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFY-----ER 251
M + K ++++ S+ N K+T++M MVS AKY +A+ +++ Y + Q
Sbjct: 1 MPSQKEYNVKIASLGNTAKVTKTMNMVSTAKYRKAQDAQGSSKLYSDQLNQVIAGLAASG 60
Query: 252 AEVTPP----EDDPKQLFVAMTSDRGLCGAVHTGVSKVIRN 362
E++ P + K L + TSD+GLC + + K + N
Sbjct: 61 GELSHPLMKTSEVKKVLVITFTSDKGLCAGFNNNLIKFVEN 101
>UniRef50_A4EBH2 Cluster: ATP synthase gamma chain; n=1; Collinsella
aerofaciens ATCC 25986|Rep: ATP synthase gamma chain -
Collinsella aerofaciens ATCC 25986
Length = 302
Score = 46.0 bits (104), Expect = 8e-04
Identities = 35/99 (35%), Positives = 47/99 (47%), Gaps = 11/99 (11%)
Frame = +3
Query: 87 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGA--VQFYERAEV 260
MA L+ I R+ SV ++IT++M+MVS AK RA K A PY E V +
Sbjct: 1 MANLRDIKKRISSVTTTKQITRTMEMVSTAKIRRALDRSKQAEPYKEALTDVMLTVAGDA 60
Query: 261 TPPEDDP---------KQLFVAMTSDRGLCGAVHTGVSK 350
+ DP L V + SDRGL G +T V +
Sbjct: 61 SCSGTDPMLQKHESVKHGLIVVIASDRGLAGGFNTTVER 99
>UniRef50_Q00GM7 Cluster: Plastid ATP synthase gamma subunit
protein; n=1; Karenia brevis|Rep: Plastid ATP synthase
gamma subunit protein - Karenia brevis (Dinoflagellate)
Length = 385
Score = 44.8 bits (101), Expect = 0.002
Identities = 33/129 (25%), Positives = 63/129 (48%), Gaps = 13/129 (10%)
Frame = +3
Query: 90 ATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYE------- 248
A++ + R SV+ +Q +T ++K+VSAA +++ ++RP+ E + E
Sbjct: 89 ASISELDDRAASVREMQSMTSALKLVSAASRGSVNKEVLSSRPFVEEVDRLLETLLKHIK 148
Query: 249 RAEVTPP----EDDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENIKV--ICVG 410
+ E+ P + K V +TSD GLCGA + V + R ++ ++ + V VG
Sbjct: 149 QKEMQIPLLQKREVKKVSLVVITSDHGLCGAYNFAVIEKAEKRKADLESQGLHVEFFAVG 208
Query: 411 DKSRGILQR 437
++ Q+
Sbjct: 209 EQGSAYFQQ 217
>UniRef50_Q4A603 Cluster: ATP synthase gamma chain; n=1; Mycoplasma
synoviae 53|Rep: ATP synthase gamma chain - Mycoplasma
synoviae (strain 53)
Length = 289
Score = 43.2 bits (97), Expect = 0.006
Identities = 46/153 (30%), Positives = 71/153 (46%), Gaps = 20/153 (13%)
Frame = +3
Query: 87 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRA---ERDLKAARPYGE-------GAV 236
M+ L I R+ V N +KIT +M++VS +K R +++KA + E +
Sbjct: 1 MSNLINIKNRINVVTNTRKITNAMQLVSTSKLHRIINLTKNIKAYQNLVETTFDNIVSKI 60
Query: 237 QFYERAEVTPPEDDPKQ-LFVAMTSDRGLCGAVHTGV----SKVIRN-----RLSEPGAE 386
E E+ PP+ + L++ +TSD GLCG+ ++ V KVI+ L G
Sbjct: 61 TQEELNEIFPPKQETDATLYIIVTSDIGLCGSYNSNVINELKKVIKPSDLVITLGTKGLN 120
Query: 387 NIKVICVGDKSRGILQRLYGKHIISVANEIGRL 485
I+V D+ L K S+A EIG L
Sbjct: 121 WIRVSKFKDQLYKAYVNLEDKLDYSIATEIGNL 153
>UniRef50_Q9RQ77 Cluster: ATP synthase gamma chain; n=2; Buchnera
aphidicola|Rep: ATP synthase gamma chain - Buchnera
aphidicola subsp. Schlechtendalia chinensis
Length = 290
Score = 41.5 bits (93), Expect = 0.017
Identities = 40/181 (22%), Positives = 81/181 (44%), Gaps = 11/181 (6%)
Frame = +3
Query: 87 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPY--------GEGAVQF 242
M+ K I ++ + N +KIT++M+MVS AK ++E +K+ +PY
Sbjct: 1 MSEKKEIKNKINCISNTKKITKAMEMVSIAKMKKSEIKMKSRKPYLDIIKTIISHILYNH 60
Query: 243 YERAEVTPPEDDPKQL-FVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENIKVICVGDKS 419
+ + K++ + +++DRGLCG+++ + K I ++ +N+ S
Sbjct: 61 IKYRHLYLNNRKTKKIGIIVISTDRGLCGSLNISLFKKIIQLINIYKNKNVMSSLFILGS 120
Query: 420 RGILQRLYGKHIISVANEIGRLPPTFLDASQLATAILT--SGYEFGSGKIIYNKFKSVVS 593
+G+ + I+ +I TF D + L + + + YN+FK+ +
Sbjct: 121 KGVSYFKSSTYDITYYEKIITKNYTFFDCLNFIHSSLEYYNTQKIDKLFLSYNQFKNTLV 180
Query: 594 Y 596
Y
Sbjct: 181 Y 181
>UniRef50_A4XKX1 Cluster: ATP synthase gamma chain; n=1;
Caldicellulosiruptor saccharolyticus DSM 8903|Rep: ATP
synthase gamma chain - Caldicellulosiruptor
saccharolyticus (strain ATCC 43494 / DSM 8903)
Length = 292
Score = 41.1 bits (92), Expect = 0.023
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 12/98 (12%)
Frame = +3
Query: 105 ISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYERAEVTPPE---- 272
I R+KSV +KIT++M ++SA+K R+ L + RPY E +F + V +
Sbjct: 8 IKSRIKSVNETKKITRAMYLISASKMKRSRDRLDSTRPYFEKINEFMKDLVVHGMQTNHI 67
Query: 273 -------DDPKQL-FVAMTSDRGLCGAVHTGVSKVIRN 362
+ K+L + ++ D+GLCG + V + N
Sbjct: 68 LFEGSYKEGQKRLGVIVISGDKGLCGGYNANVIRSTLN 105
>UniRef50_A4JPV4 Cluster: ATP synthase gamma chain; n=5;
Burkholderia cepacia complex|Rep: ATP synthase gamma
chain - Burkholderia vietnamiensis (strain G4 / LMG
22486) (Burkholderiacepacia (strain R1808))
Length = 312
Score = 40.7 bits (91), Expect = 0.030
Identities = 48/202 (23%), Positives = 89/202 (44%), Gaps = 17/202 (8%)
Frame = +3
Query: 96 LKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYERAE------ 257
++ I ++ S + ++IT++M+M++ K A+R + RPY E ER
Sbjct: 26 IREIRSKIASTSSTRQITKAMEMMARTKMASAQRRARDFRPYAERVRAIAERVLRDRPDY 85
Query: 258 ----VTPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENI--KVICVGDKS 419
+TP + + +++DRGLCG ++ + + L + I ++ +G +
Sbjct: 86 GSTLMTPRATVRRVGLIVVSTDRGLCGPLNARLLVQCLDALERWEHDGIACELSVIGARG 145
Query: 420 RGILQRLYGKHIISVANEIGRLP--PTFLDASQLATAILTSGYEFGSGKIIYNKFKSVVS 593
L R +G I++ + + P T L A + G E + I YN+ S ++
Sbjct: 146 LQPLMR-HGATIVARSGGLAAQPHFDTVLGALLVPLTAFVDG-ELDAVYIAYNRLTSPLA 203
Query: 594 Y-AQSD--LPLYTKKSIESASK 650
Y + D LPL T AS+
Sbjct: 204 YEPRIDMLLPLATPDDAAPASE 225
>UniRef50_Q4QC06 Cluster: ATP synthase F1 subunit gamma protein,
putative; n=6; Trypanosomatidae|Rep: ATP synthase F1
subunit gamma protein, putative - Leishmania major
Length = 303
Score = 40.7 bits (91), Expect = 0.030
Identities = 27/92 (29%), Positives = 52/92 (56%), Gaps = 5/92 (5%)
Frame = +3
Query: 96 LKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYERAEVTPPE- 272
L+ +L+ I +++KMV+ AK+ +A+ +K R Y +++ E+A P +
Sbjct: 5 LRLYKEKLEGYNRFYSIVKTIKMVTMAKFRQAQVRIKT-RDY---TLRYTEKAFSKPGQL 60
Query: 273 --DDP--KQLFVAMTSDRGLCGAVHTGVSKVI 356
D P K +++ + ++RG CGA+++ V KVI
Sbjct: 61 VGDSPQAKAIYIPVMTNRGSCGALNSNVVKVI 92
>UniRef50_Q8G7B2 Cluster: ATP synthase gamma chain; n=5;
Bifidobacterium|Rep: ATP synthase gamma chain -
Bifidobacterium longum
Length = 307
Score = 40.3 bits (90), Expect = 0.039
Identities = 27/104 (25%), Positives = 53/104 (50%), Gaps = 9/104 (8%)
Frame = +3
Query: 87 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEG---AVQ-FYERA 254
M + A+ R++S +++ KI + +M++++ +A A+PY + AVQ
Sbjct: 1 MGSQLALKSRIRSTESLAKIFNAQEMIASSHIAKARDVALNAKPYTDAIFDAVQALVAHT 60
Query: 255 EVTPP-----EDDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLS 371
+T P E +P+ +A+TSDRG+ G + + + + LS
Sbjct: 61 HITHPIAVKDEKNPRVAVLALTSDRGMAGPYTSSIIRETESLLS 104
>UniRef50_Q9PR14 Cluster: ATP synthase gamma chain; n=1; Ureaplasma
parvum|Rep: ATP synthase gamma chain - Ureaplasma parvum
(Ureaplasma urealyticum biotype 1)
Length = 286
Score = 38.3 bits (85), Expect = 0.16
Identities = 45/182 (24%), Positives = 79/182 (43%), Gaps = 11/182 (6%)
Frame = +3
Query: 93 TLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEG-------AVQFYER 251
+L A+ ++ SV+ KIT +MK+V+ AK R L A + Y + +
Sbjct: 2 SLDAMKRKINSVQTTAKITNAMKLVATAKLKRQRDRLAAIKEYCHDYYDVIGLLLSVVDD 61
Query: 252 AE-VTPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENIKVICVGDKSRGI 428
E + P + L++ + S GL G+ + V+K+I ++E +G K
Sbjct: 62 VEFLKIPNAKDRTLYITINSTMGLAGSYNYNVNKLISKIVNETDI----TFTIGKKGHDF 117
Query: 429 LQRLYGK-HIISVANEIGRLPPTFLDASQLATAILT--SGYEFGSGKIIYNKFKSVVSYA 599
+ RL G+ ++ + TF + Q+A L S E IIY KF + +++
Sbjct: 118 M-RLSGRVDQVNTYLNLNDNDLTFDMSLQIAREALELYSQGEVNKICIIYTKFINAITFE 176
Query: 600 QS 605
S
Sbjct: 177 VS 178
>UniRef50_A6V407 Cluster: Bacteriophage lambda tail assembly I; n=2;
Gammaproteobacteria|Rep: Bacteriophage lambda tail
assembly I - Pseudomonas aeruginosa PA7
Length = 221
Score = 36.7 bits (81), Expect = 0.49
Identities = 34/110 (30%), Positives = 48/110 (43%), Gaps = 2/110 (1%)
Frame = +3
Query: 291 FVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENIKVICV--GDKSRGILQRLYGKHIISV 464
F+A RG+ AV G + ++ L GAE I++ V G K G++Q + G +I V
Sbjct: 68 FLANAHLRGMEFAVFRGKRNISQDELQFGGAEEIRIAPVMHGRKRGGLVQSIVGVALI-V 126
Query: 465 ANEIGRLPPTFLDASQLATAILTSGYEFGSGKIIYNKFKSVVSYAQSDLP 614
A I P F A L A+ T+G G +I QS P
Sbjct: 127 AATIMAGPGGFAAAGGLTGAMGTAGVAMAIGGVIQMLSPQAQGLKQSAAP 176
>UniRef50_Q603U1 Cluster: ATP synthase F1, gamma subunit; n=1;
Methylococcus capsulatus|Rep: ATP synthase F1, gamma
subunit - Methylococcus capsulatus
Length = 275
Score = 35.5 bits (78), Expect = 1.1
Identities = 29/106 (27%), Positives = 48/106 (45%), Gaps = 5/106 (4%)
Frame = +3
Query: 114 RLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPY-----GEGAVQFYERAEVTPPEDD 278
R+K++ I I SM+M++ + R R ++ R G G +TP E
Sbjct: 10 RMKTLGEIAGILDSMRMLAVIESRRLTRSVECQRQLEAALRGLGRELMSHHPALTPVEP- 68
Query: 279 PKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENIKVICVGDK 416
P ++ + S+RG CG +T + + R S PG VI +G +
Sbjct: 69 PNTAWLVVGSERGFCGDFNTRLRAALEQRRS-PGE---PVIVIGSR 110
>UniRef50_A6U5S6 Cluster: Peptidoglycan-binding domain 1 protein;
n=3; Sinorhizobium|Rep: Peptidoglycan-binding domain 1
protein - Sinorhizobium medicae WSM419
Length = 1226
Score = 35.5 bits (78), Expect = 1.1
Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 3/95 (3%)
Frame = -3
Query: 626 LSVEGQVGLGVRDHRLELVVNDLSGTKLVSRGEDSSGQLTCVQESRWETS--DLISNTND 453
LSV G GLG R L V DL+ K +R E+ QL+ V E + + DL + D
Sbjct: 340 LSVRGDSGLGARIEALAARVEDLASEKAAARLEERLDQLSAVLEHSRQGAEPDLTDHLAD 399
Query: 452 V-LSVQSLQDAARFISHTDHLDVLSTRFAETVADH 351
+ +++L + + + LD L+ R E +A H
Sbjct: 400 ISRRIEALSEYSVNNGLAERLDDLARRI-EGLAPH 433
>UniRef50_UPI0001509FE9 Cluster: hypothetical protein
TTHERM_00301690; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00301690 - Tetrahymena
thermophila SB210
Length = 665
Score = 35.1 bits (77), Expect = 1.5
Identities = 19/80 (23%), Positives = 39/80 (48%)
Frame = -3
Query: 557 SGTKLVSRGEDSSGQLTCVQESRWETSDLISNTNDVLSVQSLQDAARFISHTDHLDVLST 378
+ T++ S+ ED SG++ V +S + S ++S SL+D + + + + +S
Sbjct: 222 ASTRINSQNEDLSGEIQSVNQSDLKVSTILSQQEKTNQQNSLEDFEVELENPNLITPISQ 281
Query: 377 RFAETVADHFGYTSVYSSAQ 318
+ D F T++Y+ Q
Sbjct: 282 NQLKKSIDLFSQTAIYTDEQ 301
>UniRef50_UPI0000D5693F Cluster: PREDICTED: similar to CG11101-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG11101-PA - Tribolium castaneum
Length = 1191
Score = 34.7 bits (76), Expect = 2.0
Identities = 31/108 (28%), Positives = 48/108 (44%), Gaps = 1/108 (0%)
Frame = -3
Query: 326 SAQTSVRGHSNKQLLGVIFGRCNLSPFIELYCTFTIGTSSFQVTLSTGVFSS*HHLHGLC 147
+A++SVRG K LLGVI R N L+ G+ S L H H L
Sbjct: 843 TARSSVRGDIQKHLLGVIQRRSNNVGNSALWVDSPPGSISNLQDLDECSSPELHDCHALA 902
Query: 146 DFLDIFHRFKTD-GNGLQSSHIPVWLMVNHRHDLGADTRSEASQHFAN 6
++IF F+ + G+G + +W +++H G ++QH N
Sbjct: 903 KCINIFGGFRCECGDGYRD----IW--ADNKHRAGRHCEQCSAQHCNN 944
>UniRef50_Q38Y95 Cluster: Putative N-acetylmuramoyl-L-alanine
amidase; n=1; Lactobacillus sakei subsp. sakei 23K|Rep:
Putative N-acetylmuramoyl-L-alanine amidase -
Lactobacillus sakei subsp. sakei (strain 23K)
Length = 193
Score = 34.7 bits (76), Expect = 2.0
Identities = 22/86 (25%), Positives = 39/86 (45%)
Frame = -3
Query: 497 ESRWETSDLISNTNDVLSVQSLQDAARFISHTDHLDVLSTRFAETVADHFGYTSVYSSAQ 318
ES W SDL + N++ V+ + + TD + T+ D+F VY S +
Sbjct: 80 ESDWGRSDLATKANNLFGVKGQYQGQQILMTTDEYE---NNQRTTIKDYF---KVYPSLE 133
Query: 317 TSVRGHSNKQLLGVIFGRCNLSPFIE 240
+++ HS+ +G NL+ + E
Sbjct: 134 IAIQDHSDFLSVGTYTTLANLTNYAE 159
>UniRef50_A0BK54 Cluster: Chromosome undetermined scaffold_111,
whole genome shotgun sequence; n=5;
Oligohymenophorea|Rep: Chromosome undetermined
scaffold_111, whole genome shotgun sequence - Paramecium
tetraurelia
Length = 662
Score = 34.3 bits (75), Expect = 2.6
Identities = 25/87 (28%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Frame = +3
Query: 276 DPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENIKVICVGDKSRGILQRLYGKHI 455
D KQ + T + + GAV + +++ RL++ EN+KV K +G + R++ K I
Sbjct: 10 DVKQFMLKSTKRKVISGAVIAVILYLLKIRLTKSKTENMKVKRDEKKGKGNVDRMFLKRI 69
Query: 456 ISVAN-EIGRL-PPTFLDASQLATAIL 530
+ + I RL P LD L +++
Sbjct: 70 LKLLKIVIPRLNSPEILDLVLLTASLV 96
>UniRef50_UPI000069ECA3 Cluster: Intercellular adhesion molecule 1
precursor (ICAM-1) (Major group rhinovirus receptor)
(CD54 antigen).; n=5; Xenopus tropicalis|Rep:
Intercellular adhesion molecule 1 precursor (ICAM-1)
(Major group rhinovirus receptor) (CD54 antigen). -
Xenopus tropicalis
Length = 526
Score = 33.9 bits (74), Expect = 3.4
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -2
Query: 90 PYSCLADGKPPPRLGCRHPVRSVPT 16
P+ C ADG PPP + CR ++PT
Sbjct: 417 PFKCQADGNPPPTVTCRRDSWNLPT 441
>UniRef50_Q6CAU7 Cluster: Similarity; n=1; Yarrowia lipolytica|Rep:
Similarity - Yarrowia lipolytica (Candida lipolytica)
Length = 395
Score = 33.5 bits (73), Expect = 4.5
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +1
Query: 496 SWTQVSWPLLSSPRDTSLVPERSFTTSSSLWSRTP 600
SWT WPL S +SLVP + TT+ +++ + P
Sbjct: 13 SWTTHYWPLASGSSISSLVPVLNATTADTVYEKAP 47
>UniRef50_Q88UU2 Cluster: ATP synthase gamma chain; n=13;
Lactobacillales|Rep: ATP synthase gamma chain -
Lactobacillus plantarum
Length = 314
Score = 33.5 bits (73), Expect = 4.5
Identities = 48/192 (25%), Positives = 79/192 (41%), Gaps = 30/192 (15%)
Frame = +3
Query: 93 TLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYG---EGAVQFYERA--- 254
+L + R+ S K +IT +M+MVS +K + ++ + Y E V +A
Sbjct: 4 SLMDVKRRIDSTKKTHQITSAMQMVSTSKLNQIQKHTSTYQVYASKVESIVSHLAKAHLM 63
Query: 255 -----------------EVTPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIRN--RLSEP 377
E+ K + +TSDRGL G+ ++ V K + R +
Sbjct: 64 SASAGVANSNSNTISVSELLAQRPVKKTGLLVITSDRGLVGSYNSNVLKQTNDFMRTHKV 123
Query: 378 GAENIKVICVGDKSRGILQRLYGKHIISVANEIGRLP--PTFLDASQLATAILTSGYE-- 545
A+N V+ VG G Y K+ ++VA E + PTF + ++ + TS Y
Sbjct: 124 DADNAVVLAVG----GTGADFYKKNGLNVAYEYRGVSDVPTFKEVREIVKTV-TSMYHNE 178
Query: 546 -FGSGKIIYNKF 578
F + YN F
Sbjct: 179 VFDELYVFYNHF 190
>UniRef50_UPI000051A317 Cluster: PREDICTED: similar to
Myb-interacting protein 120 CG6061-PA isoform 1; n=2;
Apocrita|Rep: PREDICTED: similar to Myb-interacting
protein 120 CG6061-PA isoform 1 - Apis mellifera
Length = 821
Score = 33.1 bits (72), Expect = 6.0
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Frame = +1
Query: 412 INLAASCRDCTESTSLVLLMRSDVSHLLSWTQVSWPLLSSPRDTSLVPERSFTTSSSLWS 591
+N +AS +D T T + L ++ LLS +V L SSP+ ++ + +SSS S
Sbjct: 288 LNNSASSQDVTSPTKTITLAQAQQMGLLSTNKVPHILPSSPQKQGIIVNKLVQSSSSQPS 347
Query: 592 R---TPSPTCPSTLRSLLRAP 645
+ PS T S + +L AP
Sbjct: 348 KMTIVPSNTIKSPTK-ILPAP 367
>UniRef50_A6E6T9 Cluster: TonB-dependent outer membrane receptor,
putative; n=1; Pedobacter sp. BAL39|Rep: TonB-dependent
outer membrane receptor, putative - Pedobacter sp. BAL39
Length = 667
Score = 33.1 bits (72), Expect = 6.0
Identities = 35/112 (31%), Positives = 53/112 (47%), Gaps = 9/112 (8%)
Frame = -3
Query: 650 LAGALNRLLSVEGQVGLGVR---DHRLELVVND---LSGTKLVSRGED-SSGQLTCVQES 492
+AG + + E VG VR DH L + D L+ V+ G ++ + T Q+
Sbjct: 354 IAGHFKQDVHRENNVGEPVRRSADHNLYFAIEDTYHLTAALKVNGGVSYNNRKSTQAQQY 413
Query: 491 RWET-SDLISNTNDVLSVQSLQDAARFISHTDHLDVLS-TRFAETVADHFGY 342
T S+L +N+ND ++Q L +HT V S TRFA T+ D + Y
Sbjct: 414 TNNTISELPANSNDAWNLQGLLQYDLSTNHTLSFSVASKTRFA-TIKDRYSY 464
>UniRef50_A4X7K2 Cluster: Putative uncharacterized protein
precursor; n=2; Salinispora|Rep: Putative
uncharacterized protein precursor - Salinispora tropica
CNB-440
Length = 931
Score = 33.1 bits (72), Expect = 6.0
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +3
Query: 216 PYGEGAVQFYERAEVTPPEDDPKQLFVAMTSD-RGLCGAVHTGVSKVI 356
P G+ + AE+T DDPK ++VA T+ RG+ A TGV++ +
Sbjct: 244 PLGKEVLAGKGIAEITIEPDDPKTIYVATTTALRGMSSACCTGVTRPV 291
>UniRef50_A4RL12 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 774
Score = 33.1 bits (72), Expect = 6.0
Identities = 15/51 (29%), Positives = 31/51 (60%)
Frame = -3
Query: 602 LGVRDHRLELVVNDLSGTKLVSRGEDSSGQLTCVQESRWETSDLISNTNDV 450
LGV H+L ++ D + +K+VSRGE S+ + + + + +T D +++ +
Sbjct: 561 LGVPKHQLAMLERDHATSKVVSRGEASNSRTSAIWQFMSDTLDPVAHDTHI 611
>UniRef50_P17739 Cluster: Outer surface protein B precursor; n=45;
Borrelia burgdorferi group|Rep: Outer surface protein B
precursor - Borrelia burgdorferi (Lyme disease
spirochete)
Length = 296
Score = 33.1 bits (72), Expect = 6.0
Identities = 18/58 (31%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Frame = -3
Query: 593 RDHRLELVVNDLSGT-KLVSRGEDSSGQLTCVQESRWETSDLISNTNDVLSVQSLQDA 423
+D ++++ +ND +G+ K + EDS+ LT +S+ +T DL+ T+ ++VQ A
Sbjct: 218 KDGKVKVFLNDTAGSNKKTGKWEDSTSTLTISADSK-KTKDLVFLTDGTITVQQYNTA 274
>UniRef50_UPI0000F1EB51 Cluster: PREDICTED: similar to hCG1647286;
n=1; Danio rerio|Rep: PREDICTED: similar to hCG1647286 -
Danio rerio
Length = 1537
Score = 32.7 bits (71), Expect = 7.9
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Frame = -3
Query: 449 LSVQSLQDAARFISHTDHLDVLST--RFAETVADHFGYTSVYSSAQTSVRGHSNKQLLGV 276
L+VQ + D + + T H V S+ RF + D FG+ S+Y QT+VR +N LL
Sbjct: 841 LTVQ-VADQVKPVLFTAHAVVTSSDLRFDRSEVD-FGHCSIYECVQTAVR-LTNCSLLPQ 897
Query: 275 IFGRCNLSPFIELYCTFTIGT 213
FG + FI++ GT
Sbjct: 898 EFGFVGIPKFIDVQPNDGFGT 918
>UniRef50_UPI0000E46137 Cluster: PREDICTED: similar to esk kinase,
partial; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to esk kinase, partial -
Strongylocentrotus purpuratus
Length = 689
Score = 32.7 bits (71), Expect = 7.9
Identities = 23/90 (25%), Positives = 36/90 (40%), Gaps = 2/90 (2%)
Frame = -3
Query: 494 SRWETSDLISNTNDVLSVQSLQDAARFISHTDHLDVLS--TRFAETVADHFGYTSVYSSA 321
SR E + +++ + +L ARF S TDH + +S R + Y S+ S
Sbjct: 18 SREEMAQMMNGNTRDNTTGNLTSLARFHSMTDHTECMSELARHGNKPCEWLAYLSLVESH 77
Query: 320 QTSVRGHSNKQLLGVIFGRCNLSPFIELYC 231
S + L + F R I+ YC
Sbjct: 78 TVHAEETSRYRFLSLAFNRATKQIPIDKYC 107
>UniRef50_Q97LU5 Cluster: NtrC family transcriptional regulator;
n=2; Clostridium acetobutylicum|Rep: NtrC family
transcriptional regulator - Clostridium acetobutylicum
Length = 627
Score = 32.7 bits (71), Expect = 7.9
Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 9/100 (9%)
Frame = +3
Query: 354 IRNRLSEPGAENIKVICVGDK--SRGILQRLYGKHIISVANEIGRLPPTFLDASQLATAI 527
I +S+ ENIK++ G I Q LYG+ I S + R L+ ++
Sbjct: 129 ITTLISKVKTENIKIVVSGKTVTDEAIKQGLYGETINSGEESLRRAIEEALNLIEVRNIE 188
Query: 528 LTSGYEF-------GSGKIIYNKFKSVVSYAQSDLPLYTK 626
L F G G I+ ++FK +++Y S ++TK
Sbjct: 189 LRRSARFKAILDAIGEGIIVTDQFKKIITYNNSINKIFTK 228
>UniRef50_Q7UFF0 Cluster: Putative uncharacterized protein; n=1;
Pirellula sp.|Rep: Putative uncharacterized protein -
Rhodopirellula baltica
Length = 254
Score = 32.7 bits (71), Expect = 7.9
Identities = 25/95 (26%), Positives = 47/95 (49%), Gaps = 3/95 (3%)
Frame = -3
Query: 551 TKLVSRGEDSSGQLTCVQESRWETSDLISNTNDV---LSVQSLQDAARFISHTDHLDVLS 381
T+L+ + LT + S+ + L++++ + + + + D+ T LD++S
Sbjct: 2 TRLIPMAPRTFVILTVLVASQQSHAALVTSSGMIHASIRIDGVVDSGGNPVSTTGLDIMS 61
Query: 380 TRFAETVADHFGYTSVYSSAQTSVRGHSNKQLLGV 276
+ ++ D FG+ SV +SA S G SN LGV
Sbjct: 62 EPYDQS--DDFGFGSVVTSAFASANGGSNPNSLGV 94
>UniRef50_Q0FUQ8 Cluster: Putative hydrolase; n=2;
Alphaproteobacteria|Rep: Putative hydrolase -
Roseovarius sp. HTCC2601
Length = 271
Score = 32.7 bits (71), Expect = 7.9
Identities = 29/95 (30%), Positives = 40/95 (42%), Gaps = 1/95 (1%)
Frame = +3
Query: 18 LGRFGPGVGTQVVAVVYHQPNRNMATLKAISIRLKS-VKNIQKITQSMKMVSAAKYTRAE 194
LG G Q +AV + RN+ L A +R + +K + + + A Y +
Sbjct: 93 LGHSTGGCIVQTIAVTAAERVRNLV-LSAAWLRPGNYLKALFEFRLRLLATDPAAYAESA 151
Query: 195 RDLKAARPYGEGAVQFYERAEVTPPEDDPKQLFVA 299
L A + E YERA TPP D KQ VA
Sbjct: 152 ALLSYAPEWLEANWTKYERATATPPTDPAKQAIVA 186
>UniRef50_A5KME7 Cluster: Putative uncharacterized protein; n=1;
Ruminococcus torques ATCC 27756|Rep: Putative
uncharacterized protein - Ruminococcus torques ATCC
27756
Length = 868
Score = 32.7 bits (71), Expect = 7.9
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = -3
Query: 395 LDVLSTRFAETVADHF--GYTSVYSSAQTSVRGHSNKQLLGVIF 270
L +L R+ ET DH GYT +YSSA+ +V + L V F
Sbjct: 522 LHLLGVRYIETEKDHIPAGYTPLYSSAKDTVVAENKNVLPNVYF 565
>UniRef50_A4B7T7 Cluster: CheW protein; n=1; Alteromonas macleodii
'Deep ecotype'|Rep: CheW protein - Alteromonas macleodii
'Deep ecotype'
Length = 515
Score = 32.7 bits (71), Expect = 7.9
Identities = 17/53 (32%), Positives = 31/53 (58%)
Frame = +3
Query: 453 IISVANEIGRLPPTFLDASQLATAILTSGYEFGSGKIIYNKFKSVVSYAQSDL 611
I+ ++N IG +P + S++ ++T EFGS I K +VVS ++++L
Sbjct: 245 IVDLSNAIGMMPTQINETSRI---VVTQNTEFGSVGFIVAKVSNVVSISETEL 294
>UniRef50_Q9RGY2 Cluster: ATP synthase gamma chain; n=10;
Lactobacillales|Rep: ATP synthase gamma chain -
Lactobacillus acidophilus
Length = 320
Score = 32.7 bits (71), Expect = 7.9
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +3
Query: 90 ATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGE 227
A+L + ++ SVK KIT++M+MVSA+K + E K Y +
Sbjct: 3 ASLLELKRKIASVKQTGKITEAMRMVSASKLNQTENRDKDYTVYND 48
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 729,809,828
Number of Sequences: 1657284
Number of extensions: 15747542
Number of successful extensions: 50232
Number of sequences better than 10.0: 130
Number of HSP's better than 10.0 without gapping: 47632
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50114
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49173558301
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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