Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0464
(655 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g33040.1 68415.m04052 ATP synthase gamma chain, mitochondrial... 95 5e-20
At4g04640.1 68417.m00679 ATP synthase gamma chain 1, chloroplast... 66 1e-11
At1g15700.1 68414.m01884 ATP synthase gamma chain 2, chloroplast... 62 3e-10
At4g33430.1 68417.m04750 brassinosteroid insensitive 1-associate... 30 1.2
At2g13790.1 68415.m01522 leucine-rich repeat family protein / pr... 29 2.0
At2g36670.2 68415.m04498 aspartyl protease family protein contai... 28 4.7
At2g36670.1 68415.m04497 aspartyl protease family protein contai... 28 4.7
At2g13800.1 68415.m01523 leucine-rich repeat family protein / pr... 28 4.7
At5g19130.2 68418.m02277 GPI transamidase component family prote... 28 6.2
At5g19130.1 68418.m02276 GPI transamidase component family prote... 28 6.2
At4g02350.1 68417.m00319 exocyst complex subunit Sec15-like fami... 28 6.2
At4g01380.1 68417.m00178 plastocyanin-like domain-containing pro... 28 6.2
At2g04400.1 68415.m00444 indole-3-glycerol phosphate synthase (I... 28 6.2
At1g70640.1 68414.m08143 octicosapeptide/Phox/Bem1p (PB1) domain... 28 6.2
At3g21200.1 68416.m02679 expressed protein 27 8.2
At3g19895.1 68416.m02519 expressed protein 27 8.2
>At2g33040.1 68415.m04052 ATP synthase gamma chain, mitochondrial
(ATPC) identical to SP|Q96250 ATP synthase gamma chain,
mitochondrial precursor (EC 3.6.3.14) {Arabidopsis
thaliana}; contains Pfam profile: PF00231 ATP synthase
Length = 325
Score = 94.7 bits (225), Expect = 5e-20
Identities = 62/193 (32%), Positives = 108/193 (55%), Gaps = 2/193 (1%)
Frame = +3
Query: 81 RNMATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYERAEV 260
R+++T + + R+KSVKNIQKIT++MKMV+A+K + + +R + F
Sbjct: 41 RSIST-QVVRNRMKSVKNIQKITKAMKMVAASKLRAVQGRAENSRGLWQ---PFTALLGD 96
Query: 261 TPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIR--NRLSEPGAENIKVICVGDKSRGILQ 434
P D K + V ++SD+GLCG +++ V KV R +L+ + ++ + VG+K++ I+
Sbjct: 97 NPSIDVKKSVVVTLSSDKGLCGGINSTVVKVSRALYKLNAGPEKEVQFVIVGEKAKAIMF 156
Query: 435 RLYGKHIISVANEIGRLPPTFLDASQLATAILTSGYEFGSGKIIYNKFKSVVSYAQSDLP 614
R I+ E+ + P + S LA IL EF + +I+YNKF SVV++ +
Sbjct: 157 RDSKNDIVLSVTELNKNPLNYAQVSVLADDIL-KNVEFDALRIVYNKFHSVVAFLPTVST 215
Query: 615 LYTKKSIESASKL 653
+ + + IE S++
Sbjct: 216 VLSPEIIEKESEI 228
>At4g04640.1 68417.m00679 ATP synthase gamma chain 1, chloroplast
(ATPC1) identical to SP|Q01908 ATP synthase gamma chain
1, chloroplast precursor (EC 3.6.3.14) {Arabidopsis
thaliana}
Length = 373
Score = 66.5 bits (155), Expect = 1e-11
Identities = 59/183 (32%), Positives = 86/183 (46%), Gaps = 16/183 (8%)
Frame = +3
Query: 90 ATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYERAEVTPP 269
A+L+ + R+ SVKN QKIT++MK+V+AAK RA+ + RP+ E V+
Sbjct: 51 ASLRELRDRIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVLYNINEQLQ 110
Query: 270 EDD-----------PKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENIK--VICVG 410
DD K V +T DRGLCG + + K R+ E ++ VI VG
Sbjct: 111 TDDVDVPLTKVRPVKKVALVVVTGDRGLCGGFNNFIIKKAEARIKELKGLGLEYTVISVG 170
Query: 411 DKSRG-ILQRLYGKHIISVANEIGRLPPTFLDASQLATAI--LTSGYEFGSGKIIYNKFK 581
K L+R Y + E G L PT +A +A + L E +++Y KF
Sbjct: 171 KKGNSYFLRRPYIP--VDKYLEAGTL-PTAKEAQAVADDVFSLFISEEVDKVELLYTKFV 227
Query: 582 SVV 590
S+V
Sbjct: 228 SLV 230
>At1g15700.1 68414.m01884 ATP synthase gamma chain 2, chloroplast
(ATPC2) identical to SP|Q01909 ATP synthase gamma chain
2, chloroplast precursor (EC 3.6.3.14) {Arabidopsis
thaliana}; contains Pfam profile: PF00231 ATP synthase;
similar to ATP synthase gamma-subunit GI:21241 from
[Spinacia oleracea]
Length = 386
Score = 62.1 bits (144), Expect = 3e-10
Identities = 55/182 (30%), Positives = 85/182 (46%), Gaps = 15/182 (8%)
Frame = +3
Query: 90 ATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQ-FYERAEVTP 266
A ++ + R+ SVKN QKIT++M++V+AA+ RA+ + RP+ E V+ Y +
Sbjct: 61 AGIRELRERIDSVKNTQKITEAMRLVAAARVRRAQDAVIKGRPFTETLVEILYSINQSAQ 120
Query: 267 PEDDPKQL----------FVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENIK--VICVG 410
ED L V +T D+GLCG + V+K R+ E I VI VG
Sbjct: 121 LEDIDFPLSIVRPVKRVALVVVTGDKGLCGGFNNAVTKKATLRVQELKQRGIDCVVISVG 180
Query: 411 DKSRGILQRLYGKHIISVANEIGRLPPTFLDASQLATAI--LTSGYEFGSGKIIYNKFKS 584
K R + + E G + PT +A +A + L E +++Y KF S
Sbjct: 181 KKGNAYFSR-RDEFDVDKCIEGGGVFPTTKEAQVIADDVFSLFVSEEVDKVELVYTKFVS 239
Query: 585 VV 590
+V
Sbjct: 240 LV 241
>At4g33430.1 68417.m04750 brassinosteroid insensitive 1-associated
receptor kinase 1 (BAK1) / somatic embryogenesis
receptor-like kinase 3 (SERK3) identical to SP|Q94F62
BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase
1 precursor (EC 2.7.1.37) (BRI1-associated receptor
kinase 1) (Somatic embryogenesis receptor-like kinase 3)
{Arabidopsis thaliana}; contains Pfam domains PF00560:
Leucine Rich Repeat and PF00069: Protein kinase domain;
identical to cDNA somatic embryogenesis receptor-like
kinase 3 (SERK3) GI:14573458
Length = 615
Score = 30.3 bits (65), Expect = 1.2
Identities = 28/103 (27%), Positives = 41/103 (39%), Gaps = 4/103 (3%)
Frame = +3
Query: 246 ERAEVTPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGA---ENIKVICVGDK 416
ER E PP D PK+ +A+ S RGL K+I + E + + VGD
Sbjct: 377 ERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV-VGDF 435
Query: 417 SRGILQRLYGKHI-ISVANEIGRLPPTFLDASQLATAILTSGY 542
L H+ +V IG + P +L + + GY
Sbjct: 436 GLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGY 478
>At2g13790.1 68415.m01522 leucine-rich repeat family protein /
protein kinase family protein
Length = 620
Score = 29.5 bits (63), Expect = 2.0
Identities = 27/103 (26%), Positives = 40/103 (38%), Gaps = 4/103 (3%)
Frame = +3
Query: 246 ERAEVTPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGA---ENIKVICVGDK 416
ER E P D PK+ +A+ S RGL K+I + E + + VGD
Sbjct: 382 ERPEGNPALDWPKRKHIALGSARGLAYLHDHCDQKIIHRDVKAANILLDEEFEAV-VGDF 440
Query: 417 SRGILQRLYGKHI-ISVANEIGRLPPTFLDASQLATAILTSGY 542
L H+ +V IG + P +L + + GY
Sbjct: 441 GLAKLMNYNDSHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGY 483
>At2g36670.2 68415.m04498 aspartyl protease family protein contains
Pfam profile: PF00026 eukaryotic aspartyl protease
Length = 507
Score = 28.3 bits (60), Expect = 4.7
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -1
Query: 388 FSAPGSLRRLRITLDTPVCTAPHKPLSEVIATNNCLGSS 272
F APGSL +T P+C++ + + + NN G S
Sbjct: 147 FDAPGSLTAGSVTCSDPICSSVFQTTAAQCSENNQCGYS 185
>At2g36670.1 68415.m04497 aspartyl protease family protein contains
Pfam profile: PF00026 eukaryotic aspartyl protease
Length = 512
Score = 28.3 bits (60), Expect = 4.7
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -1
Query: 388 FSAPGSLRRLRITLDTPVCTAPHKPLSEVIATNNCLGSS 272
F APGSL +T P+C++ + + + NN G S
Sbjct: 152 FDAPGSLTAGSVTCSDPICSSVFQTTAAQCSENNQCGYS 190
>At2g13800.1 68415.m01523 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 601
Score = 28.3 bits (60), Expect = 4.7
Identities = 27/103 (26%), Positives = 40/103 (38%), Gaps = 4/103 (3%)
Frame = +3
Query: 246 ERAEVTPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGA---ENIKVICVGDK 416
ER E P D PK+ +A+ S RGL K+I + E + + VGD
Sbjct: 363 ERPEGNPALDWPKRKHIALGSARGLAYLHDHCDQKIIHLDVKAANILLDEEFEAV-VGDF 421
Query: 417 SRGILQRLYGKHI-ISVANEIGRLPPTFLDASQLATAILTSGY 542
L H+ +V IG + P +L + + GY
Sbjct: 422 GLAKLMNYNDSHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGY 464
>At5g19130.2 68418.m02277 GPI transamidase component family protein
/ Gaa1-like family protein contains Pfam profile:
PF04114 Gaa1-like, GPI transamidase component
Length = 696
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = -1
Query: 469 LATLMMCFPYNLCRMPRDLSPTQITLMFSAPGSLRRLRITLDTPVCT 329
L ++ PY +C++P SPT ++M+ S L + P C+
Sbjct: 508 LGFIVTLLPYFICQVPGQHSPTNRSIMWGTTSSSLLLITFVTMPGCS 554
>At5g19130.1 68418.m02276 GPI transamidase component family protein
/ Gaa1-like family protein contains Pfam profile:
PF04114 Gaa1-like, GPI transamidase component
Length = 699
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = -1
Query: 469 LATLMMCFPYNLCRMPRDLSPTQITLMFSAPGSLRRLRITLDTPVCT 329
L ++ PY +C++P SPT ++M+ S L + P C+
Sbjct: 511 LGFIVTLLPYFICQVPGQHSPTNRSIMWGTTSSSLLLITFVTMPGCS 557
>At4g02350.1 68417.m00319 exocyst complex subunit Sec15-like family
protein contains Pfam profile PF04091: Exocyst complex
subunit Sec15-like
Length = 771
Score = 27.9 bits (59), Expect = 6.2
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = -3
Query: 416 FISHTDHLDVLSTRFAETVADHFGYTSVYSSAQTSVRGHSNKQLLG 279
F H HL + R AE HF T ++A+ ++ G K++ G
Sbjct: 536 FFRHAAHLSGVPLRMAERGRRHFPLTKSQNTAEDTLSGMLKKKIDG 581
>At4g01380.1 68417.m00178 plastocyanin-like domain-containing
protein
Length = 210
Score = 27.9 bits (59), Expect = 6.2
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 491 YFLGRKSAGHCYPHLGIRV 547
YF+ K+ GHCY L +RV
Sbjct: 152 YFISSKTPGHCYAGLKLRV 170
>At2g04400.1 68415.m00444 indole-3-glycerol phosphate synthase
(IGPS) nearly identical to SP|P49572
Length = 402
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -3
Query: 638 LNRLLSVEGQVGLGVRDHRLELVVNDLSGTKLVSRGE 528
+ R+L +EG +G+ + LE D+S TK + GE
Sbjct: 304 MGRVLGIEGIELVGINNRSLETFEVDISNTKKLLEGE 340
>At1g70640.1 68414.m08143 octicosapeptide/Phox/Bem1p (PB1)
domain-containing protein contains Pfam profile PF00564:
PB1 domain
Length = 174
Score = 27.9 bits (59), Expect = 6.2
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +1
Query: 517 PLLSSPRDTSLVPERSFTTSSSLWSRTPSPTCPST 621
PL S+ + P S T+SSS SR+ SP PST
Sbjct: 107 PLKSTRTTANSSPPPSTTSSSSSKSRSRSPPSPST 141
>At3g21200.1 68416.m02679 expressed protein
Length = 317
Score = 27.5 bits (58), Expect = 8.2
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = -1
Query: 385 SAPGSLR-RLRITLDTPVCTAPHKPLSEVIATNNCLGSSSGGVTSALS 245
S P SLR + TLDTP + HKP + + + + SS G S L+
Sbjct: 35 SRPISLRCSVSTTLDTPATASTHKPFPAEV-SRSIMELSSVGTLSTLT 81
>At3g19895.1 68416.m02519 expressed protein
Length = 554
Score = 27.5 bits (58), Expect = 8.2
Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 9/66 (13%)
Frame = -3
Query: 527 DSSGQLTCVQESRWETSDLISNTNDVL---------SVQSLQDAARFISHTDHLDVLSTR 375
D +G C RW T+D D+L + L+ AA + + TDHL TR
Sbjct: 239 DGTGIQVCDPNGRWYTADNGCGVGDLLLITGKALSHATAGLRPAASYRTTTDHLSATDTR 298
Query: 374 FAETVA 357
++A
Sbjct: 299 GRASLA 304
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,861,782
Number of Sequences: 28952
Number of extensions: 353718
Number of successful extensions: 1064
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1034
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1060
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1363910256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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