Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0463
         (679 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    23   2.3  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   2.3  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   2.3  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   4.0  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   5.3  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   5.3  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   9.3  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   9.3  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   9.3  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   9.3  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   9.3  

>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = +1

Query: 199 LSIAWISIRILLPNTPILS 255
           LS AWIS+ I  PN   LS
Sbjct: 226 LSQAWISVHIWSPNCDKLS 244


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = +1

Query: 199 LSIAWISIRILLPNTPILS 255
           LS AWIS+ I  PN   LS
Sbjct: 459 LSQAWISVHIWSPNCDKLS 477


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = +1

Query: 199 LSIAWISIRILLPNTPILS 255
           LS AWIS+ I  PN   LS
Sbjct: 459 LSQAWISVHIWSPNCDKLS 477


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -1

Query: 562 CRDLNTLLLSPVSKT*GYLVISIQNN 485
           C+  N LLL   S    YL++S +NN
Sbjct: 2   CQIKNKLLLLDSSTQPNYLILSNKNN 27


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +2

Query: 377 HTAHLMVSGYRRPWTSAMPGAEPS 448
           +T H+   G+  P+T  M G E S
Sbjct: 486 YTIHMGYHGFHNPFTCNMCGVECS 509


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -3

Query: 413 GDGNHSPSGGP 381
           G GN+ P GGP
Sbjct: 530 GSGNNQPPGGP 540


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +1

Query: 193 DNLSIAWISIRILLPNTPILSIG 261
           DN+S+ +I  +ILL    IL  G
Sbjct: 903 DNISMPYIGYQILLMGGTILGPG 925


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +1

Query: 193 DNLSIAWISIRILLPNTPILSIG 261
           DN+S+ +I  +ILL    IL  G
Sbjct: 903 DNISMPYIGYQILLMGGTILGPG 925


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +1

Query: 193 DNLSIAWISIRILLPNTPILSIG 261
           DN+S+ +I  +ILL    IL  G
Sbjct: 903 DNISMPYIGYQILLMGGTILGPG 925


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +1

Query: 193 DNLSIAWISIRILLPNTPILSIG 261
           DN+S+ +I  +ILL    IL  G
Sbjct: 903 DNISMPYIGYQILLMGGTILGPG 925


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -2

Query: 324 NQYHETSRCSCLLGEAADMTATYTQD 247
           NQY ++  C+C LG +     T  +D
Sbjct: 1   NQYVDSYTCTCPLGFSGINCQTNDED 26


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,715
Number of Sequences: 336
Number of extensions: 3047
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)