Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0463
         (679 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ420785-3|CAD12783.1|  380|Anopheles gambiae serpin protein.          29   0.18 
AJ271353-1|CAB69785.1|  380|Anopheles gambiae putative serine pr...    29   0.18 
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    25   2.9  
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    23   8.9  
AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.    23   8.9  

>AJ420785-3|CAD12783.1|  380|Anopheles gambiae serpin protein.
          Length = 380

 Score = 28.7 bits (61), Expect = 0.18
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +3

Query: 177 AILGMRQFVHCLD*YSYFTTKHPYLEYRLQSYQLL 281
           A  GM   + C+  + YFT  HP+L Y L+  Q++
Sbjct: 336 AATGMIMMMRCMPMHPYFTVDHPFL-YVLRHQQMV 369


>AJ271353-1|CAB69785.1|  380|Anopheles gambiae putative serine
           protease inhibitor protein.
          Length = 380

 Score = 28.7 bits (61), Expect = 0.18
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +3

Query: 177 AILGMRQFVHCLD*YSYFTTKHPYLEYRLQSYQLL 281
           A  GM   + C+  + YFT  HP+L Y L+  Q++
Sbjct: 336 AATGMIMMMRCMPMHPYFTVDHPFL-YVLRHQQMV 369


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 9/16 (56%), Positives = 14/16 (87%)
 Frame = -3

Query: 482 SRGREFLTVGSGLALP 435
           ++GRE+  VG+G+ALP
Sbjct: 167 NQGREYTFVGNGVALP 182


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +1

Query: 385 PPDGEWLPSPMDFSNARG 438
           PPD  W P  + F+NA G
Sbjct: 104 PPDKVWKPDIVLFNNADG 121


>AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.
          Length = 406

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +1

Query: 391 DGEWLPSPMDFSNARGRAKP 450
           DGEW P  +D    +G  KP
Sbjct: 255 DGEWEPPMIDNPEYKGEWKP 274


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 652,362
Number of Sequences: 2352
Number of extensions: 12829
Number of successful extensions: 32
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68159265
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)