Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0461
         (690 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bomb...    42   0.011
UniRef50_Q54EG5 Cluster: Putative uncharacterized protein; n=1; ...    35   2.2  
UniRef50_Q236D4 Cluster: Acetyl-CoA acyltransferases family prot...    33   6.6  
UniRef50_A6EFD2 Cluster: 4-hydroxybenzoate polyprenyltransferase...    33   8.7  
UniRef50_Q7RGR5 Cluster: Homo sapiens KIAA0851 protein, putative...    33   8.7  
UniRef50_Q06134 Cluster: Sporulation-specific protein 77; n=2; S...    33   8.7  

>UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx
           mori (Silk moth)
          Length = 782

 Score = 42.3 bits (95), Expect = 0.011
 Identities = 15/18 (83%), Positives = 17/18 (94%)
 Frame = +1

Query: 49  QAGWWYLPARTHKRSYHQ 102
           +A WWYLPARTHKRSYH+
Sbjct: 568 RAEWWYLPARTHKRSYHR 585


>UniRef50_Q54EG5 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 175

 Score = 34.7 bits (76), Expect = 2.2
 Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 5/68 (7%)
 Frame = +3

Query: 333 VFKMFDNETIMKNIFVFYLSHFALFIV-ILYFYISKRTRF----CNLNM*ILLITISTVF 497
           + K  +N+    NI  F +  F L I+ IL+F     +++     +LN+ I LI+I ++F
Sbjct: 93  ISKKNENQIEFNNILSFSIKSFLLLILYILFFNYQLYSKYFIILLSLNLIITLISIKSIF 152

Query: 498 GYGRLKKI 521
            Y  LKK+
Sbjct: 153 KYKNLKKL 160


>UniRef50_Q236D4 Cluster: Acetyl-CoA acyltransferases family
           protein; n=1; Tetrahymena thermophila SB210|Rep:
           Acetyl-CoA acyltransferases family protein - Tetrahymena
           thermophila SB210
          Length = 1352

 Score = 33.1 bits (72), Expect = 6.6
 Identities = 20/82 (24%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
 Frame = -2

Query: 386 IKHENILHYRFVIKHFKNKLLII--QISPGIVQSNVDNSRKNNEWASTY*CYLNDTLIRH 213
           IK E+  HY   +    N LLI+  +    +    +D+S+  +EW   Y   +   + R 
Sbjct: 408 IKPESKAHYYSSLSFKSNDLLIVVEEFKMNLSAGEIDDSQYEDEWLKEYMTGIGHEIYRA 467

Query: 212 VK*SRLLFKTTSKCTHTLYSKY 147
              S+   KT ++   T+Y+++
Sbjct: 468 ALSSKFEGKTFTEIAATVYNEF 489


>UniRef50_A6EFD2 Cluster: 4-hydroxybenzoate
           polyprenyltransferase-related protein; n=1; Pedobacter
           sp. BAL39|Rep: 4-hydroxybenzoate
           polyprenyltransferase-related protein - Pedobacter sp.
           BAL39
          Length = 244

 Score = 32.7 bits (71), Expect = 8.7
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = +3

Query: 342 MFDNETIMKNIFVFYLSHFALFIVILYFYISKRTRFCNL 458
           +F   T   N   FYLS  ALF+V+ Y Y  + T  C++
Sbjct: 51  LFIITTYFINNLCFYLSPVALFVVLFYSYTKRFTALCHM 89


>UniRef50_Q7RGR5 Cluster: Homo sapiens KIAA0851 protein, putative;
           n=4; Plasmodium|Rep: Homo sapiens KIAA0851 protein,
           putative - Plasmodium yoelii yoelii
          Length = 734

 Score = 32.7 bits (71), Expect = 8.7
 Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
 Frame = -3

Query: 646 NFLLIFKHFNYL*LHYIWP*TSYS-RTENKFK----ISANYKKNVRRIFFNRPYPNTVLI 482
           NF+   KHF+YL   Y +P T  +  ++NK+     +S  YKK V  I  N+  P  + I
Sbjct: 303 NFICTKKHFSYLFKKYGYPITVVNLLSKNKYSDEDLLSNTYKKCVNLI--NKYIPTNIRI 360

Query: 481 VINSIHIFKLQK 446
           +   + + KL K
Sbjct: 361 IYKHLDLRKLYK 372


>UniRef50_Q06134 Cluster: Sporulation-specific protein 77; n=2;
           Saccharomyces cerevisiae|Rep: Sporulation-specific
           protein 77 - Saccharomyces cerevisiae (Baker's yeast)
          Length = 477

 Score = 32.7 bits (71), Expect = 8.7
 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
 Frame = +2

Query: 446 FLQFKYVNTINYYQHRIWVRTIKKNSSYIFF----VICTNFKFIFC 571
           F +  ++NTI +  H IWV T+ KN + +      + C N K+I C
Sbjct: 238 FEKSTFINTIEFIVHDIWVETLIKNINLLQMFDADLKCYNDKYIIC 283


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 613,134,270
Number of Sequences: 1657284
Number of extensions: 11626587
Number of successful extensions: 27441
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 26211
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27410
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54132236449
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)