Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0461
         (690 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0304 - 16510406-16511353                                         29   4.6  
08_01_0036 - 267236-268165,268255-268299,268485-268574,269485-26...    28   8.0  

>09_04_0304 - 16510406-16511353
          Length = 315

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +3

Query: 375 FVFYLSHFALFIVILYFYISKR 440
           F +YLS   +F+V LY Y+S R
Sbjct: 248 FGWYLSFMTVFVVALYLYVSNR 269


>08_01_0036 - 267236-268165,268255-268299,268485-268574,269485-269805,
            269895-270098,271532-271664,271810-271881,273106-273168,
            273252-275034,275169-275217
          Length = 1229

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 14/53 (26%), Positives = 24/53 (45%)
 Frame = +1

Query: 1    HEAPFKPKRITASQQKQAGWWYLPARTHKRSYHQ**YNKGIMCEGTGVVYLEY 159
            H    K  ++   QQK+ G WY P+   +  +     ++ +MC+G    Y  Y
Sbjct: 1116 HIRCLKTSQLAIEQQKKLGCWYCPSCLCRGCFQDKDDDQIVMCDGCDEGYHIY 1168


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,552,016
Number of Sequences: 37544
Number of extensions: 278647
Number of successful extensions: 537
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 527
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 537
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1756684372
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)