Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0460
(759 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein. 25 0.66
U81038-1|AAB39355.1| 412|Tribolium castaneum transcription fact... 25 0.66
AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. 25 0.66
AF243042-1|AAF68438.1| 126|Tribolium castaneum mutant transcrip... 25 0.66
AY321476-1|AAQ23386.1| 253|Tribolium castaneum Ash protein. 24 1.1
AJ606487-1|CAE55183.1| 203|Tribolium castaneum Giant protein pr... 24 1.5
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 23 2.0
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 23 2.0
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 23 2.0
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 23 2.0
EF125544-1|ABL73928.1| 279|Tribolium castaneum obstractor B pro... 21 8.1
AY531877-1|AAT08872.1| 247|Tribolium castaneum ORF1p protein. 21 8.1
>U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein.
Length = 283
Score = 25.0 bits (52), Expect = 0.66
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -1
Query: 303 PDHLTAPPTDPKFPP 259
P H++ DPKFPP
Sbjct: 19 PQHISGVVVDPKFPP 33
>U81038-1|AAB39355.1| 412|Tribolium castaneum transcription factor
Deformed protein.
Length = 412
Score = 25.0 bits (52), Expect = 0.66
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -1
Query: 303 PDHLTAPPTDPKFPP 259
P H++ DPKFPP
Sbjct: 19 PQHISGVVVDPKFPP 33
>AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein.
Length = 412
Score = 25.0 bits (52), Expect = 0.66
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -1
Query: 303 PDHLTAPPTDPKFPP 259
P H++ DPKFPP
Sbjct: 19 PQHISGVVVDPKFPP 33
>AF243042-1|AAF68438.1| 126|Tribolium castaneum mutant
transcription factor TcDfd1 protein.
Length = 126
Score = 25.0 bits (52), Expect = 0.66
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -1
Query: 303 PDHLTAPPTDPKFPP 259
P H++ DPKFPP
Sbjct: 19 PQHISGVVVDPKFPP 33
>AY321476-1|AAQ23386.1| 253|Tribolium castaneum Ash protein.
Length = 253
Score = 24.2 bits (50), Expect = 1.1
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -2
Query: 509 FAYDVGDIPQTLLYGVLSHVPLEASQISGEVT 414
FA +G Q +Y V+ H P ++ +SG +T
Sbjct: 8 FAMTLGQ--QNKMYNVIQHSPQQSIIVSGSIT 37
>AJ606487-1|CAE55183.1| 203|Tribolium castaneum Giant protein
protein.
Length = 203
Score = 23.8 bits (49), Expect = 1.5
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +2
Query: 191 YPEQCHQIRQPQCQLYIPYS 250
YP +C I +P CQ Y P S
Sbjct: 29 YPPRCPPIYEPSCQ-YSPVS 47
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 23.4 bits (48), Expect = 2.0
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = -3
Query: 220 LPDLVALFRVSQVC*QVLSPGALITQYSVIFTTKNL 113
+P L +LFR S++C S + + ++F T+ L
Sbjct: 141 VPQLGSLFRSSRMCFFKSSKKPAFSHFLIVFFTETL 176
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 23.4 bits (48), Expect = 2.0
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = -3
Query: 220 LPDLVALFRVSQVC*QVLSPGALITQYSVIFTTKNL 113
+P L +LFR S++C S + + ++F T+ L
Sbjct: 141 VPQLGSLFRSSRMCFFKSSKKPAFSHFLIVFFTETL 176
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 23.4 bits (48), Expect = 2.0
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = -3
Query: 220 LPDLVALFRVSQVC*QVLSPGALITQYSVIFTTKNL 113
+P L +LFR S++C S + + ++F T+ L
Sbjct: 141 VPQLGSLFRSSRMCFFKSSKKPAFSHFLIVFFTETL 176
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 23.4 bits (48), Expect = 2.0
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = -3
Query: 220 LPDLVALFRVSQVC*QVLSPGALITQYSVIFTTKNL 113
+P L +LFR S++C S + + ++F T+ L
Sbjct: 141 VPQLGSLFRSSRMCFFKSSKKPAFSHFLIVFFTETL 176
>EF125544-1|ABL73928.1| 279|Tribolium castaneum obstractor B
protein.
Length = 279
Score = 21.4 bits (43), Expect = 8.1
Identities = 8/17 (47%), Positives = 8/17 (47%)
Frame = -1
Query: 453 CPIGSESNKWGGHCYWP 403
CP G N G C WP
Sbjct: 138 CPNGLVYNDKAGICSWP 154
>AY531877-1|AAT08872.1| 247|Tribolium castaneum ORF1p protein.
Length = 247
Score = 21.4 bits (43), Expect = 8.1
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 3/35 (8%)
Frame = +3
Query: 264 GTLDQLVGLSDDLGKLDT---FVEGVTRKVAQYLG 359
GT QL+ L D GKL F E +R++ G
Sbjct: 104 GTTSQLIELLGDAGKLLASVHFAESQSRRILASAG 138
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,822
Number of Sequences: 336
Number of extensions: 3783
Number of successful extensions: 18
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20338724
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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