Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0460
(759 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_07_0331 - 29324967-29326256,29326919-29327020,29327226-293272... 157 7e-39
11_01_0809 + 7201431-7202243,7202646-7203347,7216678-7216755 32 0.43
09_02_0213 - 5842150-5842261,5842729-5842925 31 0.75
08_01_0788 + 7617929-7617969,7619848-7621622,7635250-7635437 31 0.75
08_02_0838 - 21662721-21662759,21672016-21673355,21673566-21674505 31 1.00
06_01_1156 + 9788711-9788759,9788910-9789142,9790146-9791919,981... 31 1.00
05_05_0178 - 23007705-23007722,23007770-23008582,23010227-23010274 31 1.00
05_02_0002 - 5476472-5476485,5486918-5488655 31 1.00
04_04_0356 - 24658223-24660613 31 1.3
03_01_0614 + 4515515-4515540,4515988-4516209,4516681-4516768,451... 31 1.3
12_02_0417 - 18896949-18897269,18897340-18897424,18899561-188996... 30 2.3
07_03_0375 + 17408815-17409035,17422820-17423477,17423780-174241... 30 2.3
08_02_0204 - 14253258-14253383,14253685-14253878,14254029-142547... 29 3.0
11_03_0072 + 9605273-9606814,9616982-9617016,9617271-9617348,961... 29 5.3
04_03_0245 - 13331603-13332111,13332653-13333025 29 5.3
02_02_0065 + 6490490-6491552,6491754-6493601,6493857-6494236 29 5.3
01_07_0353 + 42962769-42962972,42963062-42963138,42963571-429638... 29 5.3
11_04_0166 + 14317129-14317962,14318042-14318809,14319008-143197... 28 7.0
07_03_0482 + 18589573-18589728,18589889-18590065,18590518-185906... 28 7.0
12_02_1280 - 27517683-27517871,27517955-27518029,27518155-275183... 28 9.3
12_02_0098 + 13592581-13593120,13595729-13596668,13596879-135975... 28 9.3
07_01_0769 + 5908942-5908946,5909085-5909666,5910370-5910429,591... 28 9.3
05_03_0463 + 14334409-14334568,14334736-14334911,14335274-143353... 28 9.3
03_05_0086 - 20642873-20643033,20643384-20643504,20643698-206437... 28 9.3
>05_07_0331 -
29324967-29326256,29326919-29327020,29327226-29327278,
29327628-29327674,29327762-29327841,29327933-29328016,
29328383-29328433,29328925-29329050,29329231-29329347,
29329710-29329851,29329986-29330053,29330509-29330608,
29330713-29330840,29330929-29330997,29331083-29331205
Length = 859
Score = 157 bits (382), Expect = 7e-39
Identities = 84/212 (39%), Positives = 120/212 (56%), Gaps = 4/212 (1%)
Frame = +3
Query: 135 TEYWVISAPGD---KTCQQTWDTLNNATKSGNLSVN-YIFPIPDLKVGTLDQLVGLSDDL 302
T YW++S P T W L ++ + Y F +PDL+VGTLD L+ LSDDL
Sbjct: 3 TRYWIVSLPVQTPGSTANSLWARLQDSISRHSFDTPLYRFNVPDLRVGTLDSLLALSDDL 62
Query: 303 GKLDTFVEGVTRKVAQYLGEVLEDQRDKLHENLMANNSDLPTYLTRFQWDMAKYPIKQSL 482
K + F+EGV+ K+ + + E LE L + + TYLTRF WD KYP L
Sbjct: 63 VKSNVFIEGVSHKIRRQIEE-LERAGGVESGALTVDGVPVDTYLTRFVWDEGKYPTMSPL 121
Query: 483 RNIADIISKQVGQIDADLKVKSSAYNALKGNLHNLEKKQTGSLLTRNLADLVKKEHFILD 662
+ I I QV +I+ D+KV+ + YN ++ L + +KQTGSL R+L++LVK E +
Sbjct: 122 KEIVGSIQSQVSKIEDDMKVRGAEYNNVRSQLSAINRKQTGSLAVRDLSNLVKPEDMV-T 180
Query: 663 SEYLTTLLVIVPKSMFNDWNANYEKITDMIVP 758
SE+L TLL +VPK DW ++YE + +VP
Sbjct: 181 SEHLVTLLAVVPKYSQKDWLSSYESLDTFVVP 212
>11_01_0809 + 7201431-7202243,7202646-7203347,7216678-7216755
Length = 530
Score = 32.3 bits (70), Expect = 0.43
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 2/96 (2%)
Frame = +3
Query: 288 LSDDLGKL--DTFVEGVTRKVAQYLGEVLEDQRDKLHENLMANNSDLPTYLTRFQWDMAK 461
++DDLG++ D + + K A L ++LED R L+ + L T L QW AK
Sbjct: 116 VADDLGQMLQDAREDCESEKEAHKLDKMLEDHRTSLYPGCEQGHKKLDTTLELLQW-KAK 174
Query: 462 YPIKQSLRNIADIISKQVGQIDADLKVKSSAYNALK 569
+ S + D++ + + K+ + Y A K
Sbjct: 175 NGV--SDKAFGDLLKRIKNILPGGNKLPETTYEAKK 208
>09_02_0213 - 5842150-5842261,5842729-5842925
Length = 102
Score = 31.5 bits (68), Expect = 0.75
Identities = 18/63 (28%), Positives = 30/63 (47%)
Frame = +2
Query: 419 PPHLFDSLPMGHG*VPHKAESAEYRRHHKQTGRTDRRGSEGQVLRLQRSQRKPTQFREET 598
P H +L H VPH A+ R H +Q ++RG EG+ + ++K + T
Sbjct: 13 PRHAVQTLLCRHAAVPHVGRRAQ-RAHRRQPTTRNQRGKEGKWKNKRGKKKKRGKMSGIT 71
Query: 599 DRE 607
++E
Sbjct: 72 NKE 74
>08_01_0788 + 7617929-7617969,7619848-7621622,7635250-7635437
Length = 667
Score = 31.5 bits (68), Expect = 0.75
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 2/96 (2%)
Frame = +3
Query: 288 LSDDLGKL--DTFVEGVTRKVAQYLGEVLEDQRDKLHENLMANNSDLPTYLTRFQWDMAK 461
++DDLG++ D+ + + K A L ++LED R L+ + L T L QW AK
Sbjct: 130 VADDLGQMLQDSREDCESEKEAHKLDKMLEDHRTSLYPGCEQGHKKLDTTLELLQW-KAK 188
Query: 462 YPIKQSLRNIADIISKQVGQIDADLKVKSSAYNALK 569
+ S + D++ + K+ + Y A K
Sbjct: 189 NGV--SDKAFGDLLKLVKNILPGGNKLPETTYEAKK 222
>08_02_0838 - 21662721-21662759,21672016-21673355,21673566-21674505
Length = 772
Score = 31.1 bits (67), Expect = 1.00
Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 2/96 (2%)
Frame = +3
Query: 288 LSDDLGKL--DTFVEGVTRKVAQYLGEVLEDQRDKLHENLMANNSDLPTYLTRFQWDMAK 461
++DDLG++ D + + K A L ++LED R L+ + L T L QW AK
Sbjct: 116 VADDLGQMLQDAREDCESEKEAHKLDKMLEDHRTSLYPGCEQGHKKLDTTLELLQW-KAK 174
Query: 462 YPIKQSLRNIADIISKQVGQIDADLKVKSSAYNALK 569
+ S + D++ + K+ + Y A K
Sbjct: 175 NGV--SDKAFGDLLKLVKNILPGGNKLPETTYEAKK 208
>06_01_1156 +
9788711-9788759,9788910-9789142,9790146-9791919,
9819418-9819743
Length = 793
Score = 31.1 bits (67), Expect = 1.00
Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 2/96 (2%)
Frame = +3
Query: 288 LSDDLGKL--DTFVEGVTRKVAQYLGEVLEDQRDKLHENLMANNSDLPTYLTRFQWDMAK 461
++DDLG++ D + + K A L ++LED R L+ + L T L QW AK
Sbjct: 210 VADDLGQMLQDAREDCESEKEAHKLDKMLEDHRTSLYPGCEQGHKKLDTTLELLQW-KAK 268
Query: 462 YPIKQSLRNIADIISKQVGQIDADLKVKSSAYNALK 569
+ S + D++ + K+ + Y A K
Sbjct: 269 NGV--SDKAFGDLLKLVKNILPGGNKLPETTYEAKK 302
>05_05_0178 - 23007705-23007722,23007770-23008582,23010227-23010274
Length = 292
Score = 31.1 bits (67), Expect = 1.00
Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 2/96 (2%)
Frame = +3
Query: 288 LSDDLGKL--DTFVEGVTRKVAQYLGEVLEDQRDKLHENLMANNSDLPTYLTRFQWDMAK 461
++DDLG++ D + + K A L ++LED R L+ + L T L QW AK
Sbjct: 132 VADDLGQMLQDAREDCESEKEAHKLDKMLEDHRTSLYPGCEQGHKKLDTTLELLQW-KAK 190
Query: 462 YPIKQSLRNIADIISKQVGQIDADLKVKSSAYNALK 569
+ S + D++ + K+ + Y A K
Sbjct: 191 NGV--SDKAFGDLLKLVKNILPGGNKLPETTYEAKK 224
>05_02_0002 - 5476472-5476485,5486918-5488655
Length = 583
Score = 31.1 bits (67), Expect = 1.00
Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 2/96 (2%)
Frame = +3
Query: 288 LSDDLGKL--DTFVEGVTRKVAQYLGEVLEDQRDKLHENLMANNSDLPTYLTRFQWDMAK 461
++DDLG++ D + + K A L ++LED R L+ + L T L QW AK
Sbjct: 116 VADDLGQMLQDAREDCESEKEAHKLDKMLEDHRTSLYPGCEQGHKKLDTTLELLQW-KAK 174
Query: 462 YPIKQSLRNIADIISKQVGQIDADLKVKSSAYNALK 569
+ S + D++ + K+ + Y A K
Sbjct: 175 NGV--SDKAFGDLLKLVKNILPGGNKLPETTYEAKK 208
>04_04_0356 - 24658223-24660613
Length = 796
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +3
Query: 288 LSDDLGKL--DTFVEGVTRKVAQYLGEVLEDQRDKLHENLMANNSDLPTYLTRFQW 449
++DDLG++ D + + K A L ++LED R L+ + L T L QW
Sbjct: 116 VADDLGQMLQDAREDCESEKEAHKLDKMLEDHRTSLYPGCEQGHKKLDTTLELLQW 171
>03_01_0614 +
4515515-4515540,4515988-4516209,4516681-4516768,
4517084-4517123,4517259-4517305,4517464-4517584,
4517931-4518091
Length = 234
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/43 (30%), Positives = 29/43 (67%)
Frame = +3
Query: 366 LEDQRDKLHENLMANNSDLPTYLTRFQWDMAKYPIKQSLRNIA 494
L+++ ++LH+ + + DLPT++ +++ A Y KQ+L ++A
Sbjct: 187 LDEESEELHQKFLEKDIDLPTFVQKYKKLRAAYH-KQALLHLA 228
>12_02_0417 -
18896949-18897269,18897340-18897424,18899561-18899656,
18900418-18900476,18901285-18901359
Length = 211
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -2
Query: 206 GIVQGIPSLLTGLVARGTDH 147
G+V GIP LL G + RG DH
Sbjct: 161 GVVNGIPQLLQGEMHRGADH 180
>07_03_0375 +
17408815-17409035,17422820-17423477,17423780-17424161,
17424236-17424550,17424727-17425118,17432479-17432508
Length = 665
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +3
Query: 288 LSDDLGKL--DTFVEGVTRKVAQYLGEVLEDQRDKLHENLMANNSDLPTYLTRFQW 449
++DDLG++ D + + K A L ++LED R L+ + L T L QW
Sbjct: 138 VADDLGQMLQDAKEDCESEKGAHKLDKMLEDHRTSLYPGCEQGHKKLDTTLEFLQW 193
>08_02_0204 -
14253258-14253383,14253685-14253878,14254029-14254743,
14254811-14254837,14258779-14258838,14263174-14264844,
14267402-14267518,14267593-14267763,14270248-14270346,
14271684-14271770,14272392-14272475,14272929-14273068,
14274414-14274494,14275492-14275680,14275986-14276022
Length = 1265
Score = 29.5 bits (63), Expect = 3.0
Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 2/96 (2%)
Frame = +3
Query: 288 LSDDLGKL--DTFVEGVTRKVAQYLGEVLEDQRDKLHENLMANNSDLPTYLTRFQWDMAK 461
+++DLG++ D + + K A L ++LED R L+ + L T L QW AK
Sbjct: 451 VAEDLGQMLQDAREDCESEKEAHKLDKMLEDHRTSLYPGCEQGHKKLDTTLELLQW-KAK 509
Query: 462 YPIKQSLRNIADIISKQVGQIDADLKVKSSAYNALK 569
+ S + D++ + K+ + Y A K
Sbjct: 510 NGV--SDKAFGDLLKLVKNILPGGNKLPETTYEAKK 543
>11_03_0072 +
9605273-9606814,9616982-9617016,9617271-9617348,
9617427-9617501,9617583-9617657,9617731-9617977,
9618070-9618313,9618852-9619309,9619388-9619675,
9619751-9619788,9619882-9620452
Length = 1216
Score = 28.7 bits (61), Expect = 5.3
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = +3
Query: 294 DDLGKL--DTFVEGVTRKVAQYLGEVLEDQRDKLHENLMANNSDLPTYLTRFQW 449
DDLG++ D + + K A L +LED R L+ + L T L QW
Sbjct: 118 DDLGQMLQDAKEDCESEKEAHKLERMLEDHRTSLYPGYEQGHKKLDTTLEFLQW 171
>04_03_0245 - 13331603-13332111,13332653-13333025
Length = 293
Score = 28.7 bits (61), Expect = 5.3
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +3
Query: 288 LSDDLGKLDTFVEGV--TRKVAQYLGEVLEDQRDKLHENLMANNSDLPTYLTRFQW 449
++DDLG++ V + K A L ++LED R L+ + L T L QW
Sbjct: 37 VADDLGQMLQDAREVCESEKEAHKLDKMLEDHRTSLYPGCEQGHKKLDTTLEFLQW 92
>02_02_0065 + 6490490-6491552,6491754-6493601,6493857-6494236
Length = 1096
Score = 28.7 bits (61), Expect = 5.3
Identities = 33/121 (27%), Positives = 51/121 (42%)
Frame = +3
Query: 264 GTLDQLVGLSDDLGKLDTFVEGVTRKVAQYLGEVLEDQRDKLHENLMANNSDLPTYLTRF 443
GT+D +G L KLD V +T + LG +L+ Q L N + +P L+
Sbjct: 92 GTIDPSIGNLTYLRKLDLPVNHLTGTIPSELGRLLDLQHVNLSYNSL--QGGIPASLSLC 149
Query: 444 QWDMAKYPIKQSLRNIADIISKQVGQIDADLKVKSSAYNALKGNLHNLEKKQTGSLLTRN 623
Q I + +++ I +G + L+ YN L G + + K GSL N
Sbjct: 150 Q---QLENISLAFNHLSGGIPPAMGDLSM-LRTVQLQYNMLDGAMPRMIGK-LGSLEVLN 204
Query: 624 L 626
L
Sbjct: 205 L 205
>01_07_0353 +
42962769-42962972,42963062-42963138,42963571-42963817,
42963907-42964476,42964998-42965171,42965514-42965640,
42965719-42965828,42966707-42966907,42966999-42967966,
42968110-42968358,42968760-42969105
Length = 1090
Score = 28.7 bits (61), Expect = 5.3
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -3
Query: 526 SICPTCLLMMSAIFRRLC 473
S+CP CL ++S F+RLC
Sbjct: 199 SVCPNCLPLISKHFQRLC 216
>11_04_0166 +
14317129-14317962,14318042-14318809,14319008-14319740,
14353399-14353892,14353971-14354417,14354505-14355110,
14355204-14355391,14355470-14355640,14355723-14355810
Length = 1442
Score = 28.3 bits (60), Expect = 7.0
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +3
Query: 288 LSDDLGKL--DTFVEGVTRKVAQYLGEVLEDQRDKLHENLMANNSDLPTYLTRFQW 449
++DD G++ D + + K A L ++LED R L+ + L T L QW
Sbjct: 37 VADDFGQMLQDAKEDCESEKGAHKLDKMLEDHRTSLYPGCEQGHKKLDTTLEFLQW 92
>07_03_0482 +
18589573-18589728,18589889-18590065,18590518-18590688,
18590913-18591029,18591614-18591742,18592210-18592311,
18592412-18592498,18592585-18592638,18594880-18595016,
18595181-18595235,18596133-18596188,18596275-18596334,
18596442-18596529,18596634-18597371,18597451-18597511,
18598301-18598403,18599180-18599311,18599393-18599477
Length = 835
Score = 28.3 bits (60), Expect = 7.0
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +1
Query: 214 QATSVSTIYSLFLTLRWELWISWWGCQMIW 303
Q ++ ++ LFL ++ SWW C M W
Sbjct: 304 QEKALVSLAKLFLEFKYAPTPSWWDCTMYW 333
>12_02_1280 -
27517683-27517871,27517955-27518029,27518155-27518318,
27518424-27518538,27518783-27519074,27519162-27519318,
27519438-27519510,27520309-27520377,27520471-27520694,
27520800-27520981,27521067-27522064,27522335-27522580
Length = 927
Score = 27.9 bits (59), Expect = 9.3
Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
Frame = +2
Query: 500 HKQTGRTDRRGSEGQVLRLQRSQR-KPTQFREETD---RELVDPQLGRSSQEGALHLGQR 667
HK R+ RG + + R QRS+ K FREE + +E ++ QL +E + +
Sbjct: 386 HKHRSRSRERGRDAE-RRGQRSEELKENTFREEDEEEYQEKIEQQLAMQEEEDPEKIKEE 444
Query: 668 VPDHTPGHRAQVNVQRLECQLRE 736
A+ Q+L+ Q E
Sbjct: 445 ARRRKEAIMAKYRQQQLQKQQLE 467
>12_02_0098 +
13592581-13593120,13595729-13596668,13596879-13597502,
13604810-13604946,13604994-13605035
Length = 760
Score = 27.9 bits (59), Expect = 9.3
Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 2/96 (2%)
Frame = +3
Query: 288 LSDDLGKL--DTFVEGVTRKVAQYLGEVLEDQRDKLHENLMANNSDLPTYLTRFQWDMAK 461
++DDLG++ D + + K L ++LED R L+ + L T L QW AK
Sbjct: 296 VADDLGQMLQDAREDCESEKEDHKLDKMLEDHRTSLYPGCEQGHKKLNTTLEFLQW-KAK 354
Query: 462 YPIKQSLRNIADIISKQVGQIDADLKVKSSAYNALK 569
+ S + D+++ + K+ + Y A K
Sbjct: 355 NGV--SDKAFGDLLNLVKNILPGRNKLPETTYEAKK 388
>07_01_0769 +
5908942-5908946,5909085-5909666,5910370-5910429,
5910635-5910674,5910767-5910860,5911582-5911952
Length = 383
Score = 27.9 bits (59), Expect = 9.3
Identities = 21/86 (24%), Positives = 33/86 (38%), Gaps = 2/86 (2%)
Frame = +2
Query: 503 KQTGRTDRRGSEGQVLRLQRSQRKPTQFREETDRELVDPQLGRSSQEGALHLGQRVPDHT 682
++ G RR GQ QR Q + Q +E E + + QEG++ Q
Sbjct: 63 EERGEKRRRVGHGQQRSHQRDQERSHQHDQERSVERDQERSHQRDQEGSVERDQERSHQR 122
Query: 683 PGHRAQVNVQR--LECQLREDNGHDR 754
HR+ Q +EC + D+
Sbjct: 123 DRHRSVKRDQHRSVECDQQRSRQRDQ 148
>05_03_0463 +
14334409-14334568,14334736-14334911,14335274-14335357,
14335374-14335685
Length = 243
Score = 27.9 bits (59), Expect = 9.3
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +3
Query: 609 LLTRNLADLVKKEHFILDSEYLTTLLVIVPKSMFNDWN 722
L T N+ D+++K H D ++ + PKS DW+
Sbjct: 94 LRTCNIMDVMEKNHGGYDQTFIKAMGGKCPKSFITDWD 131
>03_05_0086 -
20642873-20643033,20643384-20643504,20643698-20643744,
20643882-20643921,20644331-20644418,20644949-20645161,
20645589-20645628,20646332-20646416
Length = 264
Score = 27.9 bits (59), Expect = 9.3
Identities = 14/49 (28%), Positives = 29/49 (59%)
Frame = +3
Query: 348 QYLGEVLEDQRDKLHENLMANNSDLPTYLTRFQWDMAKYPIKQSLRNIA 494
Q L L+++ ++LH+ + + DLPT++ + + Y KQ+L ++A
Sbjct: 211 QKLMAKLDEESEELHQKFLEKDIDLPTFVQKHKKLRTAYH-KQALLHLA 258
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,119,593
Number of Sequences: 37544
Number of extensions: 448462
Number of successful extensions: 1310
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1252
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1306
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2027850416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -