Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0460
(759 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_10129| Best HMM Match : No HMM Matches (HMM E-Value=.) 104 7e-23
SB_47825| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.77
SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0) 30 1.8
SB_49316| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_58079| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_3970| Best HMM Match : Drf_FH1 (HMM E-Value=1.2) 30 2.3
SB_46094| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_49317| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_48451| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_20327| Best HMM Match : LIM (HMM E-Value=4.9e-16) 29 4.1
SB_2747| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_36581| Best HMM Match : HR1 (HMM E-Value=2.2) 29 5.4
SB_34396| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_33980| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_52575| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_43621| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_34241| Best HMM Match : RuvA_C (HMM E-Value=1.5) 28 7.2
SB_24822| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_2195| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_1022| Best HMM Match : EspF (HMM E-Value=0.51) 28 9.5
SB_57080| Best HMM Match : EGF_CA (HMM E-Value=1.4013e-43) 28 9.5
SB_51146| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_41354| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_36003| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_19926| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_17640| Best HMM Match : DUF329 (HMM E-Value=6.7) 28 9.5
SB_7408| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_5107| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_552| Best HMM Match : Laminin_EGF (HMM E-Value=1.3e-23) 28 9.5
>SB_10129| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 260
Score = 104 bits (250), Expect = 7e-23
Identities = 66/157 (42%), Positives = 90/157 (57%)
Frame = +3
Query: 132 MTEYWVISAPGDKTCQQTWDTLNNATKSGNLSVNYIFPIPDLKVGTLDQLVGLSDDLGKL 311
M EYW++SAPG+KT QQT++ L + + +S Y FPIP+LKVGTLD LVGLSDDL K+
Sbjct: 1 MAEYWLVSAPGEKTQQQTYEALKS--RMVGMSPVYKFPIPELKVGTLDTLVGLSDDLNKV 58
Query: 312 DTFVEGVTRKVAQYLGEVLEDQRDKLHENLMANNSDLPTYLTRFQWDMAKYPIKQSLRNI 491
D+FVE L + + N +++ TY + + + P S
Sbjct: 59 DSFVESSVD---------LSNHAAQNDYNEHFDHNGFETYHSEDEDEDGSEPPSSS---- 105
Query: 492 ADIISKQVGQIDADLKVKSSAYNALKGNLHNLEKKQT 602
I QV QI+ DLK KS+AYN +KG L +LE+K T
Sbjct: 106 ---ILTQVSQIEHDLKTKSAAYNNIKGTLASLERKST 139
>SB_47825| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 147
Score = 31.5 bits (68), Expect = 0.77
Identities = 18/30 (60%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Frame = -3
Query: 94 NKLSETANNFG--ETTSNSGLACSPGDPLV 11
N LS N G E TSNS CSPGDPLV
Sbjct: 8 NSLSSAKNTIGSYEVTSNS---CSPGDPLV 34
>SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0)
Length = 2858
Score = 30.3 bits (65), Expect = 1.8
Identities = 26/78 (33%), Positives = 37/78 (47%)
Frame = +3
Query: 180 QTWDTLNNATKSGNLSVNYIFPIPDLKVGTLDQLVGLSDDLGKLDTFVEGVTRKVAQYLG 359
Q + NA K N +V I DLK T+ QL D + LD V V K
Sbjct: 527 QLSEAQRNAEKFKNDNVRKQKTIDDLK-NTIAQL---EDKINALDNDVREVNTK-----N 577
Query: 360 EVLEDQRDKLHENLMANN 413
++LEDQ ++H++L+ N
Sbjct: 578 DILEDQAKEMHDDLLEAN 595
>SB_49316| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 307
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +3
Query: 153 SAPGDKTCQQTWDTLNNATKSGNLSVNYIFPIPDLKVGTLDQLVG 287
SA + +W T ++T S + SV ++ IP L QL+G
Sbjct: 219 SASASSSISSSWSTTQSSTFSASKSVKHVLTIPPRTTIILTQLIG 263
>SB_58079| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 202
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = -3
Query: 85 SETANNFGETTSNSGLACSPGDPLV 11
+E ++GE TSNS CSPGDPLV
Sbjct: 68 TEAEVHWGEGTSNS---CSPGDPLV 89
>SB_3970| Best HMM Match : Drf_FH1 (HMM E-Value=1.2)
Length = 558
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = -3
Query: 64 GETTSNSGLACSPGDPLV 11
G+TTSNS CSPGDPLV
Sbjct: 476 GQTTSNS---CSPGDPLV 490
>SB_46094| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 186
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/34 (52%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = -3
Query: 109 INAVYNKLSETANN-FGETTSNSGLACSPGDPLV 11
++ + LS+ NN F TTSNS CSPGDPLV
Sbjct: 43 VDKLKETLSKLPNNLFIITTSNS---CSPGDPLV 73
>SB_49317| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 378
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +3
Query: 153 SAPGDKTCQQTWDTLNNATKSGNLSVNYIFPIPDLKVGTLDQLVG 287
SA + +W T ++T S + SV ++ IP L QL+G
Sbjct: 290 SASVSSSISSSWSTTQSSTFSASKSVKHVLTIPPRTTIILTQLIG 334
>SB_48451| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2851
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 470 KAESAEYRRHHKQTGRTDRRGSEGQVLRLQRSQRKPTQFREETD 601
+ + E R +KQ+GR +R G+ + +R QR+ + RE D
Sbjct: 1032 RRDRQEKERPYKQSGRGERNDRRGERYQDRREQREREEDREPRD 1075
>SB_20327| Best HMM Match : LIM (HMM E-Value=4.9e-16)
Length = 339
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/40 (40%), Positives = 17/40 (42%)
Frame = +2
Query: 629 RSSQEGALHLGQRVPDHTPGHRAQVNVQRLECQLREDNGH 748
RSSQ G GQ PD TP R R+ L E H
Sbjct: 159 RSSQSGGQTNGQTTPDSTPSKRKTDRPTRVRTVLNEKQLH 198
>SB_2747| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 162
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = -3
Query: 103 AVYNKLSETANNFGETTSNSGLACSPGDPLV 11
A Y+K ++ F + TSNS CSPGDPLV
Sbjct: 23 ASYSK-TQAVEKFKKCTSNS---CSPGDPLV 49
>SB_36581| Best HMM Match : HR1 (HMM E-Value=2.2)
Length = 760
Score = 28.7 bits (61), Expect = 5.4
Identities = 19/70 (27%), Positives = 35/70 (50%)
Frame = +3
Query: 474 QSLRNIADIISKQVGQIDADLKVKSSAYNALKGNLHNLEKKQTGSLLTRNLADLVKKEHF 653
Q++++ + KQV ++ + LKV+S + +K +L+K +L R+ DL K
Sbjct: 78 QTVQSRITQLEKQVAELHSQLKVESEGHAKVKKAHGDLQKSY--MVLERSYGDLQDKNRI 135
Query: 654 ILDSEYLTTL 683
I D + L
Sbjct: 136 IGDQKVRVVL 145
>SB_34396| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 141
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/20 (70%), Positives = 14/20 (70%)
Frame = -3
Query: 70 NFGETTSNSGLACSPGDPLV 11
N GE SNS CSPGDPLV
Sbjct: 12 NIGEVGSNS---CSPGDPLV 28
>SB_33980| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 141
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/20 (70%), Positives = 14/20 (70%)
Frame = -3
Query: 70 NFGETTSNSGLACSPGDPLV 11
N G TSNS CSPGDPLV
Sbjct: 12 NIGPITSNS---CSPGDPLV 28
>SB_52575| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1267
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -3
Query: 166 SPGALITQYSVIFTTKNLKINAVYNKLSETANNFG 62
+PGA+ T YS + ++ YN LS++ N G
Sbjct: 838 NPGAMYTSYSPNYWKQSSPSLTAYNSLSQSGNTLG 872
>SB_43621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1122
Score = 28.3 bits (60), Expect = 7.2
Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +2
Query: 413 Q*PPHLFDSLPMGHG*VP-HKAESAEYRRHHKQTGRTDRRGSEGQ 544
Q P +SLP+G G +P K+ A + QTG TD+ GS GQ
Sbjct: 501 QQPKEEKESLPVG-GIIPIPKSALATRDKAGSQTGSTDQTGSHGQ 544
>SB_34241| Best HMM Match : RuvA_C (HMM E-Value=1.5)
Length = 274
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -3
Query: 61 ETTSNSGLACSPGDPLV 11
E +NS +CSPGDPLV
Sbjct: 145 EEVANSSNSCSPGDPLV 161
>SB_24822| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 135
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = -3
Query: 73 NNFGETTSNSGLACSPGDPLV 11
+NF TSNS CSPGDPLV
Sbjct: 6 SNFWIVTSNS---CSPGDPLV 23
>SB_2195| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -3
Query: 55 TSNSGLACSPGDPLV 11
TSN +CSPGDPLV
Sbjct: 2 TSNRSNSCSPGDPLV 16
>SB_1022| Best HMM Match : EspF (HMM E-Value=0.51)
Length = 310
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = +2
Query: 575 PTQFREETDRELVDPQLGRSSQEGALHLGQRVPDHTPGHRAQVNVQR 715
P R+ + PQL R+ G Q + DH GHRA + V R
Sbjct: 201 PQVIRDHLAGHRIPPQLIRAQLAGHRIPPQVIRDHLAGHRAPLQVIR 247
>SB_57080| Best HMM Match : EGF_CA (HMM E-Value=1.4013e-43)
Length = 360
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +3
Query: 126 VKMTEYWVISAPGDKTCQQTWDTLNNATKSGNLSVNYIFPIPD 254
V T+YW + G +++DT + + SGN NY+ +P+
Sbjct: 269 VTRTQYWALYPTGALHSSRSFDTYGH-SGSGNNMANYLNSLPN 310
>SB_51146| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = -3
Query: 130 FTTKNLKINAVYNKLSETANNFGETTSNSGLACSPGDPLV 11
FT + N V+ N+ + T + +CSPGDPLV
Sbjct: 4 FTDTLISANIVFGHKIAIENSSLKPTFSISNSCSPGDPLV 43
>SB_41354| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 150
Score = 27.9 bits (59), Expect = 9.5
Identities = 18/33 (54%), Positives = 21/33 (63%)
Frame = -3
Query: 109 INAVYNKLSETANNFGETTSNSGLACSPGDPLV 11
I+A L +TAN+ T SNS CSPGDPLV
Sbjct: 9 ISANIQMLIKTANSKA-TRSNS---CSPGDPLV 37
>SB_36003| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 150
Score = 27.9 bits (59), Expect = 9.5
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = -3
Query: 130 FTTKNLKINAVYNKLSETANNFGETTSNSGLACSPGDPLV 11
FT + N + NK+ ET + + SNS CSPGDPLV
Sbjct: 4 FTDTLISAN-ILNKIKETRHL--QAASNS---CSPGDPLV 37
>SB_19926| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 213
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = -3
Query: 106 NAVYNKLSETANNFGETTSNSGLACSPGDPLV 11
N + KL+ A+N TSNS CSPGDPLV
Sbjct: 73 NKLMRKLAVDASNL-LLTSNS---CSPGDPLV 100
>SB_17640| Best HMM Match : DUF329 (HMM E-Value=6.7)
Length = 221
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -3
Query: 109 INAVYNKLSETANNFGETTSNSGLACSPGDPLV 11
++A + +L A+ G+ S +CSPGDPLV
Sbjct: 77 LDAAHQELELAADALGDAQPPSN-SCSPGDPLV 108
>SB_7408| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 27.9 bits (59), Expect = 9.5
Identities = 22/87 (25%), Positives = 34/87 (39%)
Frame = +2
Query: 491 RRHHKQTGRTDRRGSEGQVLRLQRSQRKPTQFREETDRELVDPQLGRSSQEGALHLGQRV 670
R+ +Q R R + Q R ++ QR+ + R+ + Q R Q L QR+
Sbjct: 37 RQRQRQRQRQRHRQRQRQRQRQRQRQRQRQRQRQRQRQRQRQRQRQRQRQRQRLRQRQRL 96
Query: 671 PDHTPGHRAQVNVQRLECQLREDNGHD 751
+ Q N + R DN HD
Sbjct: 97 RQRQRQRQQQRNDNDNDNDNRNDNDHD 123
>SB_5107| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 138
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/27 (59%), Positives = 18/27 (66%), Gaps = 3/27 (11%)
Frame = -3
Query: 82 ETANNFG---ETTSNSGLACSPGDPLV 11
E +FG +TTSNS CSPGDPLV
Sbjct: 2 EFTTHFGLHSQTTSNS---CSPGDPLV 25
>SB_552| Best HMM Match : Laminin_EGF (HMM E-Value=1.3e-23)
Length = 198
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -1
Query: 339 SWSHLRRKCQACPDHLTAPPTDP 271
S SH R+C+ C D PTDP
Sbjct: 48 SESHAGRQCERCQDGYYGTPTDP 70
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,856,094
Number of Sequences: 59808
Number of extensions: 502645
Number of successful extensions: 3035
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 2782
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3031
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2070332524
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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