Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0460
         (759 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        22   5.4  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    22   5.4  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    22   7.2  
AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc fi...    22   7.2  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    21   9.5  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    21   9.5  

>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 10/29 (34%), Positives = 13/29 (44%)
 Frame = -1

Query: 348 GLPSWSHLRRKCQACPDHLTAPPTDPKFP 262
           G+P   +L +  Q   DHL     D  FP
Sbjct: 109 GVPQLGNLTKHLQVFRDHLINQIPDKSFP 137


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 6/7 (85%), Positives = 6/7 (85%)
 Frame = -1

Query: 423 GGHCYWP 403
           GG CYWP
Sbjct: 139 GGSCYWP 145


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +2

Query: 155 CPWRQDLSADLGY 193
           CPW  +L+ D GY
Sbjct: 235 CPWICELTNDAGY 247


>AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc
           finger domain-Z1 isoform protein.
          Length = 111

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 11/50 (22%), Positives = 22/50 (44%)
 Frame = +2

Query: 494 RHHKQTGRTDRRGSEGQVLRLQRSQRKPTQFREETDRELVDPQLGRSSQE 643
           R+HK         +E Q   +++ + +  + RE +DR     Q  +  Q+
Sbjct: 49  RNHKSIYHRQHSKNEQQRKEMEQMREREREQREHSDRVTSQQQQQQQQQQ 98


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 6/20 (30%), Positives = 12/20 (60%)
 Frame = +2

Query: 185 LGYPEQCHQIRQPQCQLYIP 244
           LG P +  +++ P C++  P
Sbjct: 301 LGIPSEARELQLPGCEVLCP 320


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 6/20 (30%), Positives = 12/20 (60%)
 Frame = +2

Query: 185 LGYPEQCHQIRQPQCQLYIP 244
           LG P +  +++ P C++  P
Sbjct: 316 LGIPSEARELQLPGCEVLCP 335


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,735
Number of Sequences: 438
Number of extensions: 4654
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23875740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)