Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0459
         (674 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   1.7  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   2.3  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    21   9.2  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    21   9.2  
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    21   9.2  
AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esteras...    21   9.2  
AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esteras...    21   9.2  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -3

Query: 252  NNESVSVAGARSEAVVRTYWVLCRYHNRVV 163
            N E V V G ++EA V T      YH R+V
Sbjct: 943  NTERVLVPGDQTEAGVFTLRPATTYHIRIV 972


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
 Frame = +1

Query: 55  AVVEAVSAGTPSQRHCTHIFHEH-YLFVVI 141
           A+VE V      Q + +H FH H Y F VI
Sbjct: 578 AIVEIVLVDEVQQPNLSHPFHLHGYAFNVI 607


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 11/55 (20%), Positives = 24/55 (43%)
 Frame = +3

Query: 186 IRPSKFGPQPPIERRRH*RSRCFPANDVVVDKW*TTPIHSSSPASLCYFYRSRLQ 350
           I+   +G + P ++ +         N  + + W T   H+ + +   YFYR  ++
Sbjct: 362 IKEFYYGNEEPTDKNKDKFYLLETDNFFLREIWRTVKYHNKTSSVPIYFYRMSIE 416


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 11/55 (20%), Positives = 24/55 (43%)
 Frame = +3

Query: 186 IRPSKFGPQPPIERRRH*RSRCFPANDVVVDKW*TTPIHSSSPASLCYFYRSRLQ 350
           I+   +G + P ++ +         N  + + W T   H+ + +   YFYR  ++
Sbjct: 362 IKEFYYGNEEPTDKNKDKFYLLETDNFFLREIWRTVKYHNKTSSVPIYFYRMSIE 416


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 11/55 (20%), Positives = 24/55 (43%)
 Frame = +3

Query: 186 IRPSKFGPQPPIERRRH*RSRCFPANDVVVDKW*TTPIHSSSPASLCYFYRSRLQ 350
           I+   +G + P ++ +         N  + + W T   H+ + +   YFYR  ++
Sbjct: 362 IKEFYYGNEEPTDKNKDKFYLLETDNFFLREIWRTVKYHNKTSSVPIYFYRMSIE 416


>AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esterase
           protein.
          Length = 510

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 11/55 (20%), Positives = 24/55 (43%)
 Frame = +3

Query: 186 IRPSKFGPQPPIERRRH*RSRCFPANDVVVDKW*TTPIHSSSPASLCYFYRSRLQ 350
           I+   +G + P ++ +         N  + + W T   H+ + +   YFYR  ++
Sbjct: 362 IKEFYYGNEEPTDKNKDKFYLLETDNFFLREIWRTVKYHNKTSSVPIYFYRMSIE 416


>AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esterase
           protein.
          Length = 509

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 11/55 (20%), Positives = 24/55 (43%)
 Frame = +3

Query: 186 IRPSKFGPQPPIERRRH*RSRCFPANDVVVDKW*TTPIHSSSPASLCYFYRSRLQ 350
           I+   +G + P ++ +         N  + + W T   H+ + +   YFYR  ++
Sbjct: 361 IKEFYYGNEEPTDKNKDKFYLLETDNFFLREIWRTVKYHNKTSSVPIYFYRMSIE 415


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,814
Number of Sequences: 336
Number of extensions: 3123
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17593745
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)