BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= NRPG0459 (674 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY118547-1|AAM49916.1| 335|Drosophila melanogaster LD30049p pro... 30 2.5 AE014296-413|AAF47612.1| 335|Drosophila melanogaster CG5704-PA ... 30 2.5 >AY118547-1|AAM49916.1| 335|Drosophila melanogaster LD30049p protein. Length = 335 Score = 30.3 bits (65), Expect = 2.5 Identities = 26/106 (24%), Positives = 48/106 (45%), Gaps = 10/106 (9%) Frame = -3 Query: 519 IKPPKHTVLYTHYEQHKVLSDGAQRWSGGYALRHDIHGTVATAR---------RDVHTKS 367 I+PP YTH + KVL+ G+ +H +H +A ++ RD+ K Sbjct: 163 IEPPS----YTHNQLGKVLAAGSFNSVSPELAKHLLHRQLAKSKLYPERFYFTRDIRVKY 218 Query: 366 HSVITSGDESGRSSREKRVRN-YVSVSFTTCQRPHRSLENNESVSV 232 + I D G + ++ Y+ + + P+ S+ NNE++S+ Sbjct: 219 YHYIDIDDSLGAEMARRIIKKPYLIIKGSL--SPYLSVRNNEAISI 262 >AE014296-413|AAF47612.1| 335|Drosophila melanogaster CG5704-PA protein. Length = 335 Score = 30.3 bits (65), Expect = 2.5 Identities = 26/106 (24%), Positives = 48/106 (45%), Gaps = 10/106 (9%) Frame = -3 Query: 519 IKPPKHTVLYTHYEQHKVLSDGAQRWSGGYALRHDIHGTVATAR---------RDVHTKS 367 I+PP YTH + KVL+ G+ +H +H +A ++ RD+ K Sbjct: 163 IEPPS----YTHNQLGKVLAAGSFNSVSPELAKHLLHRQLAKSKLYPERFYFTRDIRVKY 218 Query: 366 HSVITSGDESGRSSREKRVRN-YVSVSFTTCQRPHRSLENNESVSV 232 + I D G + ++ Y+ + + P+ S+ NNE++S+ Sbjct: 219 YHYIDIDDSLGAEMARRIIKKPYLIIKGSL--SPYLSVRNNEAISI 262 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 28,832,901 Number of Sequences: 53049 Number of extensions: 610708 Number of successful extensions: 1660 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 1579 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1660 length of database: 24,988,368 effective HSP length: 82 effective length of database: 20,638,350 effective search space used: 2930645700 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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