Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0454
         (692 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeot...    25   3.0  
AY062207-1|AAL58568.1|  504|Anopheles gambiae cytochrome P450 CY...    23   6.9  
AJ970250-1|CAI96722.1|  132|Anopheles gambiae putative reverse t...    23   6.9  
AF020870-1|AAC31873.1|  692|Anopheles gambiae hexamerin A protein.     23   9.1  

>AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeotic
           protein protein.
          Length = 308

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -2

Query: 163 GEGDGPGSGHASGRLPQHQHVVALV 89
           G   G GSG +SG L  H H  ++V
Sbjct: 257 GGSGGAGSGGSSGNLGSHLHHPSIV 281


>AY062207-1|AAL58568.1|  504|Anopheles gambiae cytochrome P450
           CYP6S2 protein.
          Length = 504

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 10/35 (28%), Positives = 19/35 (54%)
 Frame = -2

Query: 262 ISDIVKFRANSYLRGDRRMQITYTIRASSVASVGE 158
           + D +++RA + +R D  MQ+   +   + A  GE
Sbjct: 252 VRDTIRYRAENGVRRDDFMQLLIDMMQENGAGAGE 286


>AJ970250-1|CAI96722.1|  132|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 132

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -3

Query: 618 ANIFSVVSRPNLLFASRSY 562
           A +F +V   NLL+A RSY
Sbjct: 12  AKVFELVIYNNLLYACRSY 30


>AF020870-1|AAC31873.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 10/35 (28%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = +1

Query: 370 NDWKRNS-DFFLIIGNRTINVNDFRQMKFDYNDRQ 471
           N + RNS DF+  + +RT+  + ++++   YN ++
Sbjct: 552 NTFVRNSRDFYWSVKDRTMYTDLYKKIMLGYNGQE 586


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 602,619
Number of Sequences: 2352
Number of extensions: 11377
Number of successful extensions: 22
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70250040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)