Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0454
         (692 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC130562-1|AAI30563.1|  195|Homo sapiens keratin associated prot...    26   1.1  
BC126131-1|AAI26132.1|  195|Homo sapiens keratin associated prot...    26   1.1  
AJ406944-1|CAC27583.1|  195|Homo sapiens keratin associated prot...    26   1.1  
AJ406941-1|CAC27580.1|  191|Homo sapiens keratin associated prot...    25   4.3  
AJ406937-1|CAC27576.1|  186|Homo sapiens keratin associated prot...    25   5.6  
AJ406940-1|CAC27579.1|  114|Homo sapiens keratin associated prot...    25   6.0  
AB011174-1|BAA25528.1|  962|Homo sapiens KIAA0602 protein protein.     27   8.2  

>BC130562-1|AAI30563.1|  195|Homo sapiens keratin associated protein
           4-14 protein.
          Length = 195

 Score = 26.2 bits (55), Expect(2) = 1.1
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -3

Query: 96  PLCSVICSAVCRPSCC 49
           P CS+  S+ CRPSCC
Sbjct: 137 PSCSI--SSCCRPSCC 150



 Score = 25.4 bits (53), Expect(2) = 1.1
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -3

Query: 75  SAVCRPSCCSRALRGAA*C 19
           S+ CRP CC R + G   C
Sbjct: 152 SSCCRPCCCLRPVCGGVSC 170


>BC126131-1|AAI26132.1|  195|Homo sapiens keratin associated protein
           4-14 protein.
          Length = 195

 Score = 26.2 bits (55), Expect(2) = 1.1
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -3

Query: 96  PLCSVICSAVCRPSCC 49
           P CS+  S+ CRPSCC
Sbjct: 137 PSCSI--SSCCRPSCC 150



 Score = 25.4 bits (53), Expect(2) = 1.1
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -3

Query: 75  SAVCRPSCCSRALRGAA*C 19
           S+ CRP CC R + G   C
Sbjct: 152 SSCCRPCCCLRPVCGGVSC 170


>AJ406944-1|CAC27583.1|  195|Homo sapiens keratin associated protein
           4.14 protein.
          Length = 195

 Score = 26.2 bits (55), Expect(2) = 1.1
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -3

Query: 96  PLCSVICSAVCRPSCC 49
           P CS+  S+ CRPSCC
Sbjct: 137 PSCSI--SSCCRPSCC 150



 Score = 25.4 bits (53), Expect(2) = 1.1
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -3

Query: 75  SAVCRPSCCSRALRGAA*C 19
           S+ CRP CC R + G   C
Sbjct: 152 SSCCRPCCCLRPVCGGVSC 170


>AJ406941-1|CAC27580.1|  191|Homo sapiens keratin associated protein
           4.9 protein.
          Length = 191

 Score = 25.0 bits (52), Expect(2) = 4.3
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -3

Query: 75  SAVCRPSCCSRALRGAA*C 19
           S+ CRP CC R + G   C
Sbjct: 148 SSCCRPCCCVRPVCGRVSC 166



 Score = 24.6 bits (51), Expect(2) = 4.3
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -3

Query: 111 TSTSLPLCSVICSAVCRPSCC 49
           T+   P C +  S+ CRPSCC
Sbjct: 93  TTCCHPRCCI--SSCCRPSCC 111


>AJ406937-1|CAC27576.1|  186|Homo sapiens keratin associated protein
           4.5 protein.
          Length = 186

 Score = 25.0 bits (52), Expect(2) = 5.6
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -3

Query: 75  SAVCRPSCCSRALRGAA*C 19
           S+ CRP CC R + G   C
Sbjct: 143 SSCCRPCCCVRPVCGRVSC 161



 Score = 24.2 bits (50), Expect(2) = 5.6
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -3

Query: 111 TSTSLPLCSVICSAVCRPSCC 49
           T+   P C V  S+ CRP CC
Sbjct: 98  TTCCCPSCCV--SSCCRPQCC 116


>AJ406940-1|CAC27579.1|  114|Homo sapiens keratin associated protein
           4.8 protein.
          Length = 114

 Score = 25.0 bits (52), Expect(2) = 6.0
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -3

Query: 75  SAVCRPSCCSRALRGAA*C 19
           S+ CRP CC R + G   C
Sbjct: 71  SSCCRPCCCVRPVCGRVSC 89



 Score = 24.2 bits (50), Expect(2) = 6.0
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -3

Query: 96 PLCSVICSAVCRPSCC 49
          P C +  S+ CRPSCC
Sbjct: 21 PSCCI--SSCCRPSCC 34


>AB011174-1|BAA25528.1|  962|Homo sapiens KIAA0602 protein protein.
          Length = 962

 Score = 26.6 bits (56), Expect(2) = 8.2
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = +3

Query: 123 RPLAWPDPGPSPSP 164
           RP A P PGP PSP
Sbjct: 6   RPRACPTPGPGPSP 19



 Score = 21.8 bits (44), Expect(2) = 8.2
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 138 PDPGPSPSPTDATLDA 185
           P PGPSP P  + + A
Sbjct: 13  PGPGPSPPPPGSHVTA 28


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,452,721
Number of Sequences: 237096
Number of extensions: 1563067
Number of successful extensions: 4883
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4096
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4797
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7951235188
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)