Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0453
         (725 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0767 - 5709733-5709789,5709845-5709871,5710374-5710449,571...    29   5.0  
01_06_1836 + 40228508-40230448                                         29   5.0  

>02_01_0767 -
           5709733-5709789,5709845-5709871,5710374-5710449,
           5710542-5710661,5711321-5711421,5711618-5711743,
           5713504-5713596,5713694-5713816,5713889-5714032,
           5714539-5714672,5714893-5715002,5715315-5715430,
           5716438-5716572,5716650-5716820,5717545-5717709,
           5718165-5718242,5718313-5718445,5718551-5718741,
           5718842-5718914,5719001-5719056,5719142-5719300,
           5719383-5719496,5719562-5719654,5720544-5720726,
           5720801-5720878,5720966-5721052,5721135-5721216,
           5721288-5721400,5721486-5721636,5721759-5721877,
           5721966-5722163,5722377-5722442,5723837-5723957,
           5724224-5724343,5724412-5724542,5725210-5725341,
           5725418-5725519,5726231-5726437,5726510-5726626,
           5727468-5727623,5727721-5727810,5728624-5728848,
           5728969-5729091,5729202-5729284,5729459-5729618,
           5730264-5730374,5730652-5730751,5731375-5731454,
           5731752-5731847,5731961-5732110
          Length = 1991

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 14/63 (22%), Positives = 30/63 (47%)
 Frame = +2

Query: 164 YNFTMQRIMQTLGFRLHHLSTIYVYCITV*RKKITVLNMETNKDPAVRVPEKIVSGSKQH 343
           + F  +RIMQT  ++      +Y+Y   + +  +  L+  T++D    + EK ++    +
Sbjct: 362 FQFLQERIMQTAAYKNDDEDIVYMYTGYMHKLMMCFLSHPTSRDKIKEIKEKTMNALSPY 421

Query: 344 SII 352
             I
Sbjct: 422 GSI 424


>01_06_1836 + 40228508-40230448
          Length = 646

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 16/52 (30%), Positives = 29/52 (55%)
 Frame = -1

Query: 725 KLKSSLKVISFTTRLFKNKKRSVGKQRKELSGGSNLKKKLRYSNTNRIENDI 570
           +L+  LK IS + ++    +  VG+ R +L GG N  + ++Y N   +EN +
Sbjct: 586 QLREELK-ISISEKVLPAYRSFVGRFRGQLEGGRNSARYIKY-NPEDLENQV 635


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,177,303
Number of Sequences: 37544
Number of extensions: 245786
Number of successful extensions: 463
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 453
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 463
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1898162308
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)