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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0449
         (720 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_38465| Best HMM Match : Nitrophorin (HMM E-Value=0.75)              29   5.0  
SB_30874| Best HMM Match : MTS (HMM E-Value=0.069)                     28   8.8  

>SB_38465| Best HMM Match : Nitrophorin (HMM E-Value=0.75)
          Length = 1167

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 13/45 (28%), Positives = 29/45 (64%)
 Frame = -2

Query: 308 VNVMKVEIKLMSRKPSSKIRKTSKLHRFIYKEYD*VPILHKDVVT 174
           V++M++ ++  +  P SK+   ++LH++   E   +PI +++VVT
Sbjct: 185 VSLMEMYLEDDNEVPYSKVHMKARLHQYFGNEKAIIPINNQNVVT 229


>SB_30874| Best HMM Match : MTS (HMM E-Value=0.069)
          Length = 233

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -3

Query: 94  RSHRCHNFNLKERFVSGLFEIRCHHL 17
           R H+C + + +E  + G   I+CHHL
Sbjct: 181 RLHKCRHLS-QESLIGGSVRIKCHHL 205


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,165,399
Number of Sequences: 59808
Number of extensions: 337644
Number of successful extensions: 559
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 544
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 558
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1913853903
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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