Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0449
         (720 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex det...    23   2.9  
DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex det...    23   2.9  
DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex det...    23   2.9  
DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex det...    23   2.9  
DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    23   2.9  
DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    23   2.9  
DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex det...    23   3.8  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   6.7  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   8.9  

>DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = +1

Query: 430 IIISMMISYEIDTSCTVINHNVSSNNFRLYQY 525
           II S+  +Y+        N+N ++NN++  QY
Sbjct: 81  IISSLSNNYKYSNYNNYNNNNYNNNNYKKLQY 112


>DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = +1

Query: 430 IIISMMISYEIDTSCTVINHNVSSNNFRLYQY 525
           II S+  +Y+        N+N ++NN++  QY
Sbjct: 81  IISSLSNNYKYSNYNNYNNNNYNNNNYKKLQY 112


>DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = +1

Query: 430 IIISMMISYEIDTSCTVINHNVSSNNFRLYQY 525
           II S+  +Y+        N+N ++NN++  QY
Sbjct: 81  IISSLSNNYKYSNYNNYNNNNYNNNNYKKLQY 112


>DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = +1

Query: 430 IIISMMISYEIDTSCTVINHNVSSNNFRLYQY 525
           II S+  +Y+        N+N ++NN++  QY
Sbjct: 81  IISSLSNNYKYSNYNNYNNNNYNNNNYKKLQY 112


>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +1

Query: 487 HNVSSNNFRLYQYSKSLHLNI 549
           +N ++NN+    Y+K L+ NI
Sbjct: 96  YNYNNNNYNNNNYNKKLYYNI 116


>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +1

Query: 487 HNVSSNNFRLYQYSKSLHLNI 549
           +N ++NN+    Y+K L+ NI
Sbjct: 96  YNYNNNNYNNNNYNKKLYYNI 116


>DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex
           determiner protein.
          Length = 191

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 9/33 (27%), Positives = 18/33 (54%)
 Frame = +1

Query: 484 NHNVSSNNFRLYQYSKSLHLNISLCTLF*NYLK 582
           N+N ++NN+  Y Y+ + + N        NY++
Sbjct: 93  NNNYNNNNYNNYNYNNNNYNNYKKLYYNINYIE 125


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -2

Query: 140 EIESVTNGSYLLTGSSQP 87
           EIES T G+Y   G   P
Sbjct: 784 EIESATEGAYTTRGGKIP 801


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 12/44 (27%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = +1

Query: 430 IIISMMISYEIDTSCTVINHNVSSNNFRLYQYSKSLH-LNISLC 558
           ++ S+  + ++   C+ ++H  SS N + +Q   SLH L++  C
Sbjct: 59  LVASLDGALKLRIRCSDVHHFESSFNAQSWQRLTSLHELHVHGC 102


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,938
Number of Sequences: 438
Number of extensions: 4218
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22292145
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)