Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0449
         (720 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g02410.1 68417.m00326 lectin protein kinase family protein co...    27   9.5  
At1g48800.1 68414.m05461 terpene synthase/cyclase family protein...    27   9.5  

>At4g02410.1 68417.m00326 lectin protein kinase family protein
           contains Pfam domains, PF00069: Protein kinase domain,
           PF00139: Legume lectins beta domain and PF00138: Legume
           lectins alpha domain
          Length = 674

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 12/54 (22%), Positives = 29/54 (53%)
 Frame = +1

Query: 355 RYRLCCPQISVKWKKRKCYDFQIVLIIISMMISYEIDTSCTVINHNVSSNNFRL 516
           +Y   CP++++ WK+R    F +++ + S +     +    VI+ ++ ++N  L
Sbjct: 439 KYLYDCPEVTLDWKQR----FNVIIGVASGLFYLHEEWEQVVIHRDIKASNVLL 488


>At1g48800.1 68414.m05461 terpene synthase/cyclase family protein
           similar to terpene cyclase GI:9293912 from [Arabidopsis
           thaliana]
          Length = 603

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 14/62 (22%), Positives = 26/62 (41%)
 Frame = -2

Query: 203 VPILHKDVVTLAINNKKDFDIEIESVTNGSYLLTGSSQPSMSQL*FERAFRFWFIRNQVP 24
           +P   K V     +  ++F+ E+ S + GSY L  + +     +        W +   +P
Sbjct: 388 LPDYLKSVAKFIFHTFQEFEREVSSESGGSYSLKATIEDCKRMMRSNLQLAKWAVTGHLP 447

Query: 23  SF 18
           SF
Sbjct: 448 SF 449


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,453,870
Number of Sequences: 28952
Number of extensions: 240361
Number of successful extensions: 453
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 445
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 453
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1565336320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)