Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0447
         (728 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ297933-1|CAC35453.2|  392|Anopheles gambiae Ag9 protein protein.     26   1.0  
EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.            25   2.4  
U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    24   5.5  
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    24   5.5  
U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    24   5.5  
AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR prot...    23   7.3  

>AJ297933-1|CAC35453.2|  392|Anopheles gambiae Ag9 protein protein.
          Length = 392

 Score = 26.2 bits (55), Expect = 1.0
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -2

Query: 145 RDSVIYVSCAGQLPTVSAGDVKLH 74
           +D V+YV   G+  T SAGD + H
Sbjct: 245 KDQVLYVGSMGKEWTTSAGDFETH 268


>EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.
          Length = 213

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 5  PRAAGIGTRPQGNTKRRVDQFE 70
          PR  G   RP G T+ ++ QF+
Sbjct: 5  PRVGGAAQRPNGATQNKICQFK 26


>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 13/47 (27%), Positives = 19/47 (40%)
 Frame = -3

Query: 285 THPSSKIRTALSHCSY*LILNDNLENTKISLQFTIDCTKIDIQFILS 145
           T+P   +RT  +H    L +   + N   S  + I C    I   LS
Sbjct: 538 TYPMIGLRTGATHYLTTLFIVTLVANVSTSFGYLISCASSSISMALS 584


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 13/47 (27%), Positives = 19/47 (40%)
 Frame = -3

Query: 285 THPSSKIRTALSHCSY*LILNDNLENTKISLQFTIDCTKIDIQFILS 145
           T+P   +RT  +H    L +   + N   S  + I C    I   LS
Sbjct: 538 TYPMIGLRTGATHYLTTLFIVTLVANVSTSFGYLISCASSSISMALS 584


>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 13/47 (27%), Positives = 19/47 (40%)
 Frame = -3

Query: 285 THPSSKIRTALSHCSY*LILNDNLENTKISLQFTIDCTKIDIQFILS 145
           T+P   +RT  +H    L +   + N   S  + I C    I   LS
Sbjct: 516 TYPMIGLRTGATHYLTTLFIVTLVANVSTSFGYLISCASSSISMALS 562


>AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR
           protein.
          Length = 460

 Score = 23.4 bits (48), Expect = 7.3
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -1

Query: 314 YFIYATLFNLHTRARRYELLL 252
           +FI  TLF L T + RY+ LL
Sbjct: 284 FFINITLFALFTLSLRYDRLL 304


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 709,206
Number of Sequences: 2352
Number of extensions: 13353
Number of successful extensions: 17
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74428737
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)