Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0446
         (690 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    28   0.083
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.4  
DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory pro...    22   4.1  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   4.1  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    22   5.4  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   9.5  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 27.9 bits (59), Expect = 0.083
 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
 Frame = -2

Query: 689 HILIHCAFNFIRLHIVFFLYIKHCQTQFL---CNYVYDYFKFWHFYLN 555
           H+L  CAF F  +H++F L + +     L   C Y Y Y  F  F ++
Sbjct: 179 HLLFCCAFIFFNMHLLFLLCLDYFTLHLLFLPCIY-YFYSAFIIFTIH 225



 Score = 26.2 bits (55), Expect = 0.25
 Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
 Frame = -2

Query: 689 HILIHCAFNFIRLHIVFFL--YIKHCQTQFLCNYVYDYFKFWHFYLNXXXXXXTYDIASS 516
           H+L  CAF    +H++F L  Y  +C    L    Y    F  F  +       Y + S+
Sbjct: 265 HLLFCCAFIIFTMHLLFLLCIYYFYCALIILLCIYYFCRAFIIFPTHFYCAFSLYPLKST 324

Query: 515 F 513
           F
Sbjct: 325 F 325



 Score = 23.0 bits (47), Expect = 2.4
 Identities = 10/39 (25%), Positives = 16/39 (41%)
 Frame = -2

Query: 689 HILIHCAFNFIRLHIVFFLYIKHCQTQFLCNYVYDYFKF 573
           H+L +C F    +H +   Y  +     L    Y Y+ F
Sbjct: 82  HLLFYCPFIIFTVHFLLCTYYFYYAFIILLCVYYFYYAF 120


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -1

Query: 333  LVDGECFNLLRVSCSSFCGF 274
            L+ G+ F L+   CS+ C F
Sbjct: 1098 LIQGQIFGLITFGCSNRCFF 1117



 Score = 21.0 bits (42), Expect = 9.5
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = -3

Query: 637  FYILNTVRRNFYAIMYTIILNSGTFILI 554
            F  +   R  +YA ++TII  + +F+ I
Sbjct: 1208 FQRMVVARYVYYATIFTIITATSSFVTI 1235


>DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory
           protein 7 protein.
          Length = 127

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +2

Query: 230 LVNTLPVILSGNMRKKPQKELQETRKRLKH 319
           L  TLP  LS    K  QK+ +   K ++H
Sbjct: 62  LKKTLPDALSSGCTKCNQKQKETAEKVIRH 91


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +3

Query: 399 SQLIILCKNFFKQYG 443
           SQL+ +CK   K YG
Sbjct: 219 SQLVFMCKKINKLYG 233


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +1

Query: 25  IPNRRTVQPIQAEPTQNYFTPAQ 93
           +PN +TV PI+  P+     P +
Sbjct: 431 VPNGKTVIPIKISPSTANMVPQE 453


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 11/28 (39%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = -1

Query: 381 NVVKILTVSRNNIYW-PLVDGECFNLLR 301
           +++K L +  +  Y  PLVD +  NLLR
Sbjct: 763 SILKRLGIDESVDYTKPLVDAQTMNLLR 790


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,715
Number of Sequences: 336
Number of extensions: 3182
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)