Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0446
         (690 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069243-1|AAL39388.1|  286|Drosophila melanogaster GM01846p pro...    33   0.37 
AE014296-3365|AAF51599.1|  286|Drosophila melanogaster CG5219-PA...    33   0.37 
BT030107-1|ABN49246.1|  635|Drosophila melanogaster GH13974p pro...    29   7.9  

>AY069243-1|AAL39388.1|  286|Drosophila melanogaster GM01846p
           protein.
          Length = 286

 Score = 33.1 bits (72), Expect = 0.37
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = +2

Query: 218 KSMRLVNTLPVILSGNMRKKPQKELQETRKRLKHSPSTNG 337
           K+++L+ TLP +  GN+R  P  +  + R R +H    +G
Sbjct: 10  KALKLLRTLPRVQIGNLRPNPNSKQNDKRGRAQHGGDKHG 49


>AE014296-3365|AAF51599.1|  286|Drosophila melanogaster CG5219-PA
           protein.
          Length = 286

 Score = 33.1 bits (72), Expect = 0.37
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = +2

Query: 218 KSMRLVNTLPVILSGNMRKKPQKELQETRKRLKHSPSTNG 337
           K+++L+ TLP +  GN+R  P  +  + R R +H    +G
Sbjct: 10  KALKLLRTLPRVQIGNLRPNPNSKQNDKRGRAQHGGDKHG 49


>BT030107-1|ABN49246.1|  635|Drosophila melanogaster GH13974p
           protein.
          Length = 635

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 11/59 (18%), Positives = 27/59 (45%)
 Frame = +1

Query: 49  PIQAEPTQNYFTPAQFLSSQSLPGVGLRYFVPLYLNEQKIEKSKQDDSKLNRIETDQVD 225
           P+ A PT+ +  P  F+ ++         +VP + + Q+++    D  +   + +  +D
Sbjct: 332 PLPASPTERHSMPTIFVGNRFNHSKNTEVYVPTWRDRQEMQNQSVDAKQDEELHSSSID 390


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,416,547
Number of Sequences: 53049
Number of extensions: 519350
Number of successful extensions: 1456
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1380
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1454
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3005453946
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)