Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0446
         (690 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.              26   0.29 
DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.              23   2.7  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    23   3.6  
DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated...    22   4.8  
DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.              22   4.8  
AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    21   8.4  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   8.4  

>DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.
          Length = 135

 Score = 26.2 bits (55), Expect = 0.29
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = +1

Query: 121 VGLRYFVPLYLNEQKIEKSKQDDSKLNRIETD 216
           +GLR  VP+   E  I++ K+DD +   I+ +
Sbjct: 24  IGLRAVVPICRIETSIDQQKEDDFRDGNIDVE 55


>DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.
          Length = 135

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 9/32 (28%), Positives = 19/32 (59%)
 Frame = +1

Query: 121 VGLRYFVPLYLNEQKIEKSKQDDSKLNRIETD 216
           +GLR  +P+   +  I++ K+DD +   I+ +
Sbjct: 24  IGLRAVIPVCRIDSGIDEKKEDDFRNGIIDVE 55


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = +2

Query: 329 TNGQYILFLDTVKILTTFY*FTDIAADHIVQK 424
           T+G  IL+   +  +  F   T++  DH ++K
Sbjct: 249 TDGYKILYFHAMSSIAEFSVSTEVLQDHTLEK 280


>DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 469

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = -1

Query: 51  WLNCSSVWYVGVAIFL 4
           ++  S +W++G  IFL
Sbjct: 290 YIKASEIWFLGCTIFL 305


>DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.
          Length = 150

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -3

Query: 430 KKFLHNMISCDVCKLIKCC 374
           +KFLH    CDV    K C
Sbjct: 123 RKFLHVNDECDVALSFKLC 141


>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
          protein.
          Length = 139

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -1

Query: 78 IVLGGFCLYWLNCSSVWYV 22
          I++GGF L WL   +++ V
Sbjct: 13 IIVGGFILCWLPFFTMYLV 31


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -1

Query: 78  IVLGGFCLYWLNCSSVWYV 22
           I++GGF L WL   +++ V
Sbjct: 461 IIVGGFILCWLPFFTMYLV 479


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,205
Number of Sequences: 438
Number of extensions: 4039
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21073995
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)