Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0445
         (638 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    26   0.30 
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    24   1.2  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    21   6.6  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    21   6.6  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   8.7  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   8.7  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   8.7  

>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 25.8 bits (54), Expect = 0.30
 Identities = 16/51 (31%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
 Frame = +2

Query: 401 PDGSQVATGGHTGKVTVYGIINGTVDKV-LDTRGKFIMSVAWSPDGRYIAS 550
           P   ++A GG T ++  Y +I+  + ++ LDT+  + ++VA + DGR  A+
Sbjct: 116 PRKLRLADGGKTLEIN-YKLIDPDLKELNLDTKESYALTVAETADGRLNAT 165


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 12/42 (28%), Positives = 20/42 (47%)
 Frame = -3

Query: 285 SPSGLTATDTTGISCPSRVCNSSSLLFSYDQTFTKLSKPPVT 160
           SP G  +  +T  S P++  ++S+  +S     T  S  P T
Sbjct: 70  SPQGAPSPSSTPSSLPTQRTSTSNPTYSSRSVMTSCSSVPTT 111


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +2

Query: 452 YGIINGTVDKVLDTRGKFIMSVAW 523
           Y ++     + LD R KF++  AW
Sbjct: 153 YAVLKPLYLRALDRRDKFMLLGAW 176


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +2

Query: 452 YGIINGTVDKVLDTRGKFIMSVAW 523
           Y ++     + LD R KF++  AW
Sbjct: 153 YAVLKPLYLRALDRRDKFMLLGAW 176


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/30 (26%), Positives = 14/30 (46%)
 Frame = +2

Query: 374 SDMWKIVFSPDGSQVATGGHTGKVTVYGII 463
           S  W+I  SP+  Q     + G+   Y ++
Sbjct: 398 SSYWQIPLSPESRQYTAFLYNGRSYTYQVL 427


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 16/52 (30%), Positives = 24/52 (46%)
 Frame = -1

Query: 632 RPARGPLSCAASSLGSRRTSKPNRLQRRSLCTYHRGSRQQT**TFPSYLALY 477
           R A G  S A++S G  +++      R SLC   R ++  T      Y+A Y
Sbjct: 342 RSATGGNS-ASNSSGDAQSTSLRPFSRWSLCNSARSNKYPTRVPHRPYVAQY 392


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -1

Query: 638 SGRPARGPLSCAASS 594
           SG P  GPL  + SS
Sbjct: 234 SGEPGNGPLDLSVSS 248


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,258
Number of Sequences: 336
Number of extensions: 3163
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16501678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)