Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0445
         (638 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578808-1|AAT07313.1|  458|Anopheles gambiae saxophone protein.       24   3.5  
AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic acetylch...    23   6.2  
AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic acetylch...    23   8.2  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   8.2  

>AY578808-1|AAT07313.1|  458|Anopheles gambiae saxophone protein.
          Length = 458

 Score = 24.2 bits (50), Expect = 3.5
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = +2

Query: 80  HEDLIYGCAWANINHSTDSKGPSKDYIVTGGLDNL 184
           HE L   C+     ++ DS GP K ++ + G+ N+
Sbjct: 60  HEQLPLYCSQNQKPNTGDSGGPKKRHVSSTGMYNI 94


>AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 5 protein.
          Length = 533

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +1

Query: 451 VWNNQWNCG*SARYEGKVYYVCCLEP 528
           V N +W+         ++YY CC EP
Sbjct: 207 VTNGEWDLLGVPGKRNEIYYNCCPEP 232


>AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 9 protein.
          Length = 406

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = +1

Query: 451 VWNNQWNCG*SARYEGKVYYVCCLEP 528
           V N++W     +      YY CC EP
Sbjct: 204 VSNSEWKIAKISVERNTRYYPCCTEP 229


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +2

Query: 395  FSPDGSQVATGGHTGKVTVY 454
            FSP G+ V+ G H G    Y
Sbjct: 1147 FSPYGADVSRGDHRGGAAFY 1166


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 668,445
Number of Sequences: 2352
Number of extensions: 13625
Number of successful extensions: 20
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62723250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)