Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0445
(638 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g29830.1 68417.m04246 transducin family protein / WD-40 repea... 93 1e-19
At5g25150.1 68418.m02981 transducin family protein / WD-40 repea... 69 3e-12
At2g41500.1 68415.m05127 WD-40 repeat family protein / small nuc... 68 6e-12
At4g02730.1 68417.m00372 transducin family protein / WD-40 repea... 66 2e-11
At3g49660.1 68416.m05427 transducin family protein / WD-40 repea... 60 9e-10
At1g71840.1 68414.m08302 transducin family protein / WD-40 repea... 60 9e-10
At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p... 60 1e-09
At5g08390.1 68418.m00988 transducin family protein / WD-40 repea... 58 6e-09
At1g48630.1 68414.m05440 guanine nucleotide-binding family prote... 56 3e-08
At3g18130.1 68416.m02305 guanine nucleotide-binding family prote... 54 8e-08
At5g23430.2 68418.m02749 transducin family protein / WD-40 repea... 53 2e-07
At5g23430.1 68418.m02748 transducin family protein / WD-40 repea... 53 2e-07
At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 ... 52 3e-07
At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 ... 52 3e-07
At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 ... 52 3e-07
At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 ... 52 3e-07
At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 ... 52 3e-07
At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless... 52 4e-07
At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p... 52 4e-07
At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1 p... 50 1e-06
At1g18080.1 68414.m02238 WD-40 repeat family protein / auxin-dep... 50 2e-06
At5g64630.2 68418.m08122 transducin family protein / WD-40 repea... 48 4e-06
At5g64630.1 68418.m08121 transducin family protein / WD-40 repea... 48 4e-06
At4g21530.1 68417.m03111 transducin family protein / WD-40 repea... 48 4e-06
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 48 5e-06
At1g15440.2 68414.m01856 transducin family protein / WD-40 repea... 48 5e-06
At1g15440.1 68414.m01855 transducin family protein / WD-40 repea... 48 5e-06
At3g42660.1 68416.m04436 transducin family protein / WD-40 repea... 47 1e-05
At5g13480.1 68418.m01554 WD-40 repeat family protein similar to ... 46 2e-05
At3g44530.1 68416.m04786 transducin family protein / WD-40 repea... 46 2e-05
At5g08560.1 68418.m01018 transducin family protein / WD-40 repea... 45 5e-05
At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regul... 45 5e-05
At2g43770.1 68415.m05441 transducin family protein / WD-40 repea... 44 6e-05
At5g50230.1 68418.m06221 transducin family protein / WD-40 repea... 44 9e-05
At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6 ... 43 2e-04
At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6 ... 43 2e-04
At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pf... 42 3e-04
At2g22040.1 68415.m02617 transducin family protein / WD-40 repea... 42 3e-04
At5g64630.3 68418.m08123 transducin family protein / WD-40 repea... 42 3e-04
At5g27945.1 68418.m03364 transducin family protein / WD-40 repea... 42 3e-04
At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pf... 42 3e-04
At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic regul... 42 5e-04
At1g73720.1 68414.m08536 transducin family protein / WD-40 repea... 42 5e-04
At5g43920.1 68418.m05372 transducin family protein / WD-40 repea... 41 6e-04
At3g18140.1 68416.m02306 transducin family protein / WD-40 repea... 41 6e-04
At2g05720.1 68415.m00613 transducin family protein / WD-40 repea... 41 6e-04
At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 ... 41 6e-04
At2g47410.1 68415.m05917 transducin family protein / WD-40 repea... 41 8e-04
At4g29860.1 68417.m04250 transducin family protein / WD-40 repea... 40 0.001
At2g26060.1 68415.m03129 transducin family protein / WD-40 repea... 40 0.001
At5g49430.1 68418.m06116 transducin family protein / WD-40 repea... 40 0.001
At3g53390.1 68416.m05892 transducin family protein / WD-40 repea... 40 0.001
At2g37160.1 68415.m04559 transducin family protein / WD-40 repea... 40 0.001
At1g24130.1 68414.m03044 transducin family protein / WD-40 repea... 40 0.001
At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2 ... 40 0.002
At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5 ... 39 0.002
At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pf... 39 0.002
At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pf... 39 0.002
At1g79990.1 68414.m09356 coatomer protein complex, subunit beta ... 39 0.002
At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochro... 39 0.002
At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochro... 39 0.002
At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5 ... 39 0.003
At1g52360.1 68414.m05909 coatomer protein complex, subunit beta ... 39 0.003
At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG) co... 38 0.004
At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 ... 38 0.006
At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 ... 38 0.006
At5g16750.1 68418.m01961 transducin family protein / WD-40 repea... 38 0.007
At3g15980.3 68416.m02022 coatomer protein complex, subunit beta ... 38 0.007
At3g15980.2 68416.m02021 coatomer protein complex, subunit beta ... 38 0.007
At3g15980.1 68416.m02020 coatomer protein complex, subunit beta ... 38 0.007
At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5 ... 37 0.010
At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10... 37 0.010
At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5 ... 37 0.013
At5g14050.1 68418.m01644 transducin family protein / WD-40 repea... 37 0.013
At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6 ... 36 0.017
At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 ... 36 0.017
At3g49180.1 68416.m05375 transducin family protein / WD-40 repea... 36 0.017
At3g21540.1 68416.m02717 transducin family protein / WD-40 repea... 36 0.017
At3g18060.1 68416.m02297 transducin family protein / WD-40 repea... 36 0.017
At3g09080.1 68416.m01067 transducin family protein / WD-40 repea... 36 0.017
At5g50970.1 68418.m06321 WD-40 repeat family protein contains Pf... 36 0.023
At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pf... 36 0.023
At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6 ... 36 0.030
At2g01330.1 68415.m00050 transducin family protein / WD-40 repea... 36 0.030
At5g15550.2 68418.m01821 transducin family protein / WD-40 repea... 35 0.040
At5g15550.1 68418.m01820 transducin family protein / WD-40 repea... 35 0.040
At2g33340.2 68415.m04087 transducin family protein / WD-40 repea... 35 0.040
At2g33340.1 68415.m04086 transducin family protein / WD-40 repea... 35 0.040
At5g52250.1 68418.m06485 transducin family protein / WD-40 repea... 34 0.069
At3g52190.1 68416.m05731 transducin family protein / WD-40 repea... 34 0.069
At2g46290.1 68415.m05758 eukaryotic translation initiation facto... 34 0.069
At2g46280.2 68415.m05756 eukaryotic translation initiation facto... 34 0.069
At2g46280.1 68415.m05755 eukaryotic translation initiation facto... 34 0.069
At2g18900.1 68415.m02205 transducin family protein / WD-40 repea... 34 0.069
At3g56900.1 68416.m06329 aladin-related / adracalin-related weak... 34 0.092
At3g05090.2 68416.m00553 transducin family protein / WD-40 repea... 34 0.092
At3g05090.1 68416.m00552 transducin family protein / WD-40 repea... 34 0.092
At2g46280.3 68415.m05757 eukaryotic translation initiation facto... 33 0.12
At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10... 33 0.12
At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10... 33 0.12
At4g03020.1 68417.m00410 transducin family protein / WD-40 repea... 33 0.16
At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha... 33 0.16
At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha... 33 0.16
At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6 ... 33 0.21
At4g30510.2 68417.m04332 transport protein-related weak similari... 33 0.21
At4g30510.1 68417.m04331 transport protein-related weak similari... 33 0.21
At1g10580.1 68414.m01192 transducin family protein / WD-40 repea... 33 0.21
At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8 ... 32 0.28
At5g19920.1 68418.m02370 transducin family protein / WD-40 repea... 32 0.37
At2g47990.1 68415.m06006 transducin family protein / WD-40 repea... 32 0.37
At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pf... 32 0.37
At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pf... 32 0.37
At1g49540.1 68414.m05553 transducin family protein / WD-40 repea... 32 0.37
At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1 pro... 31 0.49
At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pf... 31 0.49
At5g05970.1 68418.m00661 transducin family protein / WD-40 repea... 31 0.65
At3g27640.1 68416.m03452 transducin family protein / WD-40 repea... 31 0.65
At2g26490.1 68415.m03178 transducin family protein / WD-40 repea... 31 0.65
At1g04510.1 68414.m00442 transducin family protein / WD-40 repea... 31 0.65
At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6 ... 31 0.85
At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pf... 31 0.85
At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pf... 31 0.85
At3g21060.1 68416.m02662 transducin family protein / WD-40 repea... 31 0.85
At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6 ... 31 0.85
At1g29320.1 68414.m03584 transducin family protein / WD-40 repea... 31 0.85
At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pf... 30 1.1
At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2 pro... 30 1.1
At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5 ... 30 1.1
At4g07410.1 68417.m01136 transducin family protein / WD-40 repea... 30 1.1
At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase cyc... 30 1.1
At2g30050.1 68415.m03654 transducin family protein / WD-40 repea... 30 1.1
At2g01470.1 68415.m00070 St12p protein (ST12p) / SEC12p protein,... 30 1.1
At5g60940.2 68418.m07645 transducin family protein / WD-40 repea... 30 1.5
At5g60940.1 68418.m07644 transducin family protein / WD-40 repea... 30 1.5
At5g56130.1 68418.m07002 transducin family protein / WD-40 repea... 30 1.5
At5g27640.1 68418.m03311 eukaryotic translation initiation facto... 30 1.5
At5g25780.1 68418.m03060 eukaryotic translation initiation facto... 30 1.5
At5g23730.1 68418.m02782 transducin family protein / WD-40 repea... 30 1.5
At4g05410.1 68417.m00823 transducin family protein / WD-40 repea... 30 1.5
At1g80670.1 68414.m09466 transducin family protein / WD-40 repea... 30 1.5
At1g52730.2 68414.m05959 transducin family protein / WD-40 repea... 30 1.5
At1g52730.1 68414.m05958 transducin family protein / WD-40 repea... 30 1.5
At1g24530.1 68414.m03088 transducin family protein / WD-40 repea... 30 1.5
At5g10940.1 68418.m01269 transducin family protein / WD-40 repea... 29 2.0
At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta... 29 2.0
At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta... 29 2.0
At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta... 29 2.0
At3g01340.1 68416.m00051 protein transport protein SEC13 family ... 29 2.0
At2g40360.1 68415.m04977 transducin family protein / WD-40 repea... 29 2.0
At2g16405.1 68415.m01878 transducin family protein / WD-40 repea... 29 2.0
At5g48100.1 68418.m05942 laccase family protein / diphenol oxida... 29 2.6
At3g15610.1 68416.m01980 transducin family protein / WD-40 repea... 29 2.6
At4g18905.1 68417.m02787 transducin family protein / WD-40 repea... 29 3.4
At4g18900.1 68417.m02786 transducin family protein / WD-40 repea... 29 3.4
At2g21920.1 68415.m02604 hypothetical protein 29 3.4
At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 ... 29 3.4
At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4 pro... 28 4.5
At2g19260.1 68415.m02248 ELM2 domain-containing protein / PHD fi... 28 4.5
At1g12910.1 68414.m01499 flower pigmentation protein (AN11) cont... 28 4.5
At5g14530.1 68418.m01703 transducin family protein / WD-40 repea... 28 6.0
At4g40050.1 68417.m05671 expressed protein 28 6.0
At2g34260.1 68415.m04191 transducin family protein / WD-40 repea... 28 6.0
At2g20330.1 68415.m02374 transducin family protein / WD-40 repea... 28 6.0
At1g48670.1 68414.m05447 auxin-responsive GH3 family protein sim... 28 6.0
At1g27840.1 68414.m03412 transducin family protein / WD-40 repea... 28 6.0
At1g19750.1 68414.m02469 transducin family protein / WD-40 repea... 28 6.0
At4g30840.1 68417.m04375 WD-40 repeat protein family 27 7.9
At4g21130.1 68417.m03055 transducin family protein / WD-40 repea... 27 7.9
At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic c... 27 7.9
At3g10530.1 68416.m01264 transducin family protein / WD-40 repea... 27 7.9
>At4g29830.1 68417.m04246 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400); G
protein beta subunit-like protein, Schistosoma mansoni,
gb:U30261
Length = 321
Score = 93.5 bits (222), Expect = 1e-19
Identities = 59/203 (29%), Positives = 100/203 (49%), Gaps = 14/203 (6%)
Frame = +2
Query: 71 ENAHEDLIYGCAWANINHSTDSKGPSKDYIVTGGLDNLVKVWSYENNKLELLHTLEGHEM 250
ENAHED ++ W +T+ + P+ ++TG LD VK+W ++L+L+ T GH +
Sbjct: 10 ENAHEDSVWAATWVP---ATEDR-PA--LLLTGSLDETVKLW--RPDELDLVRTNTGHSL 61
Query: 251 PVVSVAVSPDGETIAXXXXXXXXXXXXXXXGQKIREIQTDSSDMWKIVFSPDGSQVA-TG 427
V ++A P G A I ++ S++W + F P G+ +A G
Sbjct: 62 GVAALAAHPSGIIAASSSIDSFVRVFDVDTNATIAVLEAPPSEVWGMQFEPKGTILAVAG 121
Query: 428 GHTGKVTVYGIINGTVDKVLD-------------TRGKFIMSVAWSPDGRYIASGAEGGS 568
G + V ++ + + L + KF++SVAWSP+G+ +A G+ G+
Sbjct: 122 GSSASVKLWDTASWRLISTLSIPRPDAPKPSDKTSSKKFVLSVAWSPNGKRLACGSMDGT 181
Query: 569 VYLFDVSQGKMLHTIEAHAQAVR 637
+ +FDV + K+LH +E H VR
Sbjct: 182 ICVFDVDRSKLLHQLEGHNMPVR 204
Score = 50.4 bits (115), Expect = 1e-06
Identities = 40/156 (25%), Positives = 67/156 (42%), Gaps = 7/156 (4%)
Frame = +2
Query: 143 PSKDYIVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETIAXXXXXXXXX 322
P+ + G +D + V+ + +KL LH LEGH MPV S+ SP +
Sbjct: 168 PNGKRLACGSMDGTICVFDVDRSKL--LHQLEGHNMPVRSLVFSPVDPRVLFSGSDDGHV 225
Query: 323 XXXXXXGQK-IREIQTDSSDMWKIVFSPDGSQVATGGHTGKVTVYGIINGTVDKVLDTRG 499
G+ + + +S + + SPDG +ATG V ++ + + +
Sbjct: 226 NMHDAEGKTLLGSMSGHTSWVLSVDASPDGGAIATGSSDRTVRLWDLKMRAAIQTMSNHN 285
Query: 500 KFIMSVAWSPDG------RYIASGAEGGSVYLFDVS 589
+ SVA+ P G +AS ++ SV L+D S
Sbjct: 286 DQVWSVAFRPPGGTGVRAGRLASVSDDKSVSLYDYS 321
>At5g25150.1 68418.m02981 transducin family protein / WD-40 repeat
family protein similar to TBP-associated factor
(GI:1732075) [Homo sapiens] and to 100 kDa subunit of
Pol II transcription factor (GI:1491718) {Homo sapiens];
contains Pfam PF00400: WD domain, G-beta repeat (6
copies)|8689032|gb|AV528749.1|AV528749
Length = 666
Score = 68.9 bits (161), Expect = 3e-12
Identities = 41/164 (25%), Positives = 76/164 (46%)
Frame = +2
Query: 143 PSKDYIVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETIAXXXXXXXXX 322
P D++++ D +++WS + N + + +GH PV SP G A
Sbjct: 428 PPGDFVLSSSADTTIRLWSTKLNANLVCY--KGHNYPVWDAQFSPFGHYFASCSHDRTAR 485
Query: 323 XXXXXXGQKIREIQTDSSDMWKIVFSPDGSQVATGGHTGKVTVYGIINGTVDKVLDTRGK 502
Q +R + SD + + P+ + +ATG V ++ + G ++
Sbjct: 486 IWSMDRIQPLRIMAGHLSD---VDWHPNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRS 542
Query: 503 FIMSVAWSPDGRYIASGAEGGSVYLFDVSQGKMLHTIEAHAQAV 634
++S+A SPDGRY+ASG E G++ ++D+S + + + H V
Sbjct: 543 MVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCV 586
Score = 52.8 bits (121), Expect = 2e-07
Identities = 29/110 (26%), Positives = 52/110 (47%)
Frame = +2
Query: 143 PSKDYIVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETIAXXXXXXXXX 322
P+ +YI TG D V++W + E + GH V+S+A+SPDG +A
Sbjct: 509 PNCNYIATGSSDKTVRLWDVQTG--ECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIM 566
Query: 323 XXXXXXGQKIREIQTDSSDMWKIVFSPDGSQVATGGHTGKVTVYGIINGT 472
+ I + +S +W + +S +GS +A+G V ++ + + T
Sbjct: 567 MWDLSTARCITPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLWDVTSST 616
Score = 44.0 bits (99), Expect = 9e-05
Identities = 32/136 (23%), Positives = 53/136 (38%), Gaps = 2/136 (1%)
Frame = +2
Query: 233 LEGHEMPVVSVAVSPDGETIAXXXXXXXXXXXXXXXGQKIREIQTDSSDMWKIVFSPDGS 412
L GH PV S SP G+ + + + + +W FSP G
Sbjct: 414 LLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGH 473
Query: 413 QVATGGHTGKVTVYGIINGTVDKVLDTR--GKFIMSVAWSPDGRYIASGAEGGSVYLFDV 586
A+ H ++ ++D++ R + V W P+ YIA+G+ +V L+DV
Sbjct: 474 YFASCSHDRTARIW-----SMDRIQPLRIMAGHLSDVDWHPNCNYIATGSSDKTVRLWDV 528
Query: 587 SQGKMLHTIEAHAQAV 634
G+ + H V
Sbjct: 529 QTGECVRIFIGHRSMV 544
>At2g41500.1 68415.m05127 WD-40 repeat family protein / small
nuclear ribonucleoprotein Prp4p-related similar to U4/U6
small nuclear ribonucleoprotein hPrp4 (GP:2708305) {Homo
sapiens}; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies)|19877698|gb|AU238529.1|AU238529
Length = 554
Score = 67.7 bits (158), Expect = 6e-12
Identities = 45/164 (27%), Positives = 69/164 (42%)
Frame = +2
Query: 143 PSKDYIVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETIAXXXXXXXXX 322
P D + T D K+W + LL T EGH + VA P G+ +
Sbjct: 308 PVDDCLATASADRTAKLWKTDGT---LLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWR 364
Query: 323 XXXXXXGQKIREIQTDSSDMWKIVFSPDGSQVATGGHTGKVTVYGIINGTVDKVLDTRGK 502
G ++ + S ++ I F DG+ A+ G V+ + G V K
Sbjct: 365 LWDINTGAELLLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIK 424
Query: 503 FIMSVAWSPDGRYIASGAEGGSVYLFDVSQGKMLHTIEAHAQAV 634
+ SV +SP+G ++ASG E ++D+ K L+ I AHA V
Sbjct: 425 PVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYIIPAHANLV 468
>At4g02730.1 68417.m00372 transducin family protein / WD-40 repeat
family protein similar to C. elegans putative WD-repeat
protein C14B1.4 (SP:Q17963)
Length = 333
Score = 66.1 bits (154), Expect = 2e-11
Identities = 50/170 (29%), Positives = 77/170 (45%), Gaps = 6/170 (3%)
Frame = +2
Query: 143 PSKDYIVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETIAXXXXXXXXX 322
P + IV+G D +++W + K + ++ H MP+ SV + DG I
Sbjct: 138 PPSNLIVSGSFDETIRIWEVKTGKC--VRMIKAHSMPISSVHFNRDGSLIVSASHDGSCK 195
Query: 323 XXXXXXGQKIREIQTDSSDMWKIV-FSPDGS--QVATGGHTGKVTVYGIINGTVDKVLD- 490
G ++ + D S FSP+G VAT T K++ Y G KV
Sbjct: 196 IWDAKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYA--TGKFLKVYTG 253
Query: 491 -TRGKFIMSVAWS-PDGRYIASGAEGGSVYLFDVSQGKMLHTIEAHAQAV 634
T F ++ A+S +G+YI SG+E VYL+D+ +L +E H AV
Sbjct: 254 HTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQARNILQRLEGHTDAV 303
Score = 55.6 bits (128), Expect = 3e-08
Identities = 44/193 (22%), Positives = 74/193 (38%), Gaps = 1/193 (0%)
Frame = +2
Query: 59 LLKKENAHEDLIYGCAWANINHSTDSKGPSKDYIVTGGLDNLVKVWSYENNKLELLHTLE 238
L+ + H I AW++ +H T S D +++W + E L L
Sbjct: 77 LIHRYEGHSSGISDLAWSSDSHYTCSASD----------DCTLRIWD-ARSPYECLKVLR 125
Query: 239 GHEMPVVSVAVSPDGETIAXXXXXXXXXXXXXXXGQKIREIQTDSSDMWKIVFSPDGSQV 418
GH V V +P I G+ +R I+ S + + F+ DGS +
Sbjct: 126 GHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLI 185
Query: 419 ATGGHTGKVTVYGIINGTVDKVL-DTRGKFIMSVAWSPDGRYIASGAEGGSVYLFDVSQG 595
+ H G ++ GT K L D + + +SP+G++I ++ L + + G
Sbjct: 186 VSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYATG 245
Query: 596 KMLHTIEAHAQAV 634
K L H V
Sbjct: 246 KFLKVYTGHTNKV 258
Score = 42.3 bits (95), Expect = 3e-04
Identities = 31/138 (22%), Positives = 55/138 (39%), Gaps = 1/138 (0%)
Frame = +2
Query: 224 LHTLEGHEMPVVSVAVSPDGETIAXXXXXXXXXXXXXXXGQKIREIQTDSSDMWKIVFSP 403
L TLEGH + V S DG +A I + SS + + +S
Sbjct: 36 LKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSS 95
Query: 404 DGSQVATGGHTGKVTVYGIING-TVDKVLDTRGKFIMSVAWSPDGRYIASGAEGGSVYLF 580
D + + ++ + KVL F+ V ++P I SG+ ++ ++
Sbjct: 96 DSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIW 155
Query: 581 DVSQGKMLHTIEAHAQAV 634
+V GK + I+AH+ +
Sbjct: 156 EVKTGKCVRMIKAHSMPI 173
Score = 29.9 bits (64), Expect = 1.5
Identities = 17/77 (22%), Positives = 33/77 (42%)
Frame = +2
Query: 404 DGSQVATGGHTGKVTVYGIINGTVDKVLDTRGKFIMSVAWSPDGRYIASGAEGGSVYLFD 583
+ + G +G V +Y K L+ I V +S DG +AS + ++ L+
Sbjct: 14 NANSTGNAGTSGNVPIYKPYRHL--KTLEGHTAAISCVKFSNDGNLLASASVDKTMILWS 71
Query: 584 VSQGKMLHTIEAHAQAV 634
+ ++H E H+ +
Sbjct: 72 ATNYSLIHRYEGHSSGI 88
>At3g49660.1 68416.m05427 transducin family protein / WD-40 repeat
family protein beta-transducin, Schizosaccharomyces
pombe, EMBL:CAA17803
Length = 317
Score = 60.5 bits (140), Expect = 9e-10
Identities = 41/168 (24%), Positives = 73/168 (43%), Gaps = 4/168 (2%)
Frame = +2
Query: 143 PSKDYIVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETIAXXXXXXXXX 322
P + IV+G D V++W K L L H PV +V + DG I
Sbjct: 123 PQSNMIVSGSFDETVRIWDVTTGKC--LKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCR 180
Query: 323 XXXXXXGQKIREIQTDSSDMWKIV-FSPDGSQVATGGHTGKVTVYGIINGTVDKVLD--T 493
G ++ + D + V FSP+G + G + ++ I + K
Sbjct: 181 IWDSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHV 240
Query: 494 RGKFIMSVAWS-PDGRYIASGAEGGSVYLFDVSQGKMLHTIEAHAQAV 634
++ +S A+S +G+ I SG+E V++++++ K+L +E H + V
Sbjct: 241 NAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETV 288
Score = 42.7 bits (96), Expect = 2e-04
Identities = 28/132 (21%), Positives = 52/132 (39%)
Frame = +2
Query: 218 ELLHTLEGHEMPVVSVAVSPDGETIAXXXXXXXXXXXXXXXGQKIREIQTDSSDMWKIVF 397
E + GHE + VA S D I G I+ + ++ + + F
Sbjct: 62 EPVQEFTGHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNF 121
Query: 398 SPDGSQVATGGHTGKVTVYGIINGTVDKVLDTRGKFIMSVAWSPDGRYIASGAEGGSVYL 577
+P + + +G V ++ + G KVL + +V ++ DG I S + G +
Sbjct: 122 NPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRI 181
Query: 578 FDVSQGKMLHTI 613
+D G + T+
Sbjct: 182 WDSGTGHCVKTL 193
>At1g71840.1 68414.m08302 transducin family protein / WD-40 repeat
family protein contains Pfam profile:PF00560 Leucine
Rich Repeat (4 copies); Pfam profile:PF00069 Eukaryotic
protein kinase domain; Pfam profile:PF00400 WD domain,
G-beta repeat (7 copies)
Length = 407
Score = 60.5 bits (140), Expect = 9e-10
Identities = 36/134 (26%), Positives = 61/134 (45%), Gaps = 1/134 (0%)
Frame = +2
Query: 224 LHTLEGHEMPVVSVAVSP-DGETIAXXXXXXXXXXXXXXXGQKIREIQTDSSDMWKIVFS 400
+HT GH+ + ++A SP D +A G E+ + + FS
Sbjct: 63 VHTFTGHKGELYALACSPTDATLVATGGGDDKAFLWKIGNGDWAAELPGHKDSVSCLAFS 122
Query: 401 PDGSQVATGGHTGKVTVYGIINGTVDKVLDTRGKFIMSVAWSPDGRYIASGAEGGSVYLF 580
DG +A+GG G V ++ +GT+ VLD G I V W P G + +G+E S++++
Sbjct: 123 YDGQLLASGGLDGVVQIFDASSGTLKCVLDGPGAGIEWVRWHPRGHIVLAGSEDCSLWMW 182
Query: 581 DVSQGKMLHTIEAH 622
+ + L+ H
Sbjct: 183 NADKEAYLNMFSGH 196
Score = 50.8 bits (116), Expect = 7e-07
Identities = 37/181 (20%), Positives = 76/181 (41%), Gaps = 6/181 (3%)
Frame = +2
Query: 113 NINHSTDSKGPSKDYIVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVA---VSPDG 283
N+N + P I TG D + VW+ + E +H ++GH + ++ +
Sbjct: 197 NLNVTCGDFTPDGKLICTGSDDASLIVWNPKT--CESIHIVKGHPYHTEGLTCLDINSNS 254
Query: 284 ETIAXXXXXXXXXXXXXXXGQKIREIQTDSSDMWKIVFSPDGSQV---ATGGHTGKVTVY 454
G+ + + + + + + FSP + + ATGG K+ ++
Sbjct: 255 SLAISGSKDGSVHIVNIVTGKVVSSLNSHTDSVECVKFSPSSATIPLAATGGMDKKLIIW 314
Query: 455 GIINGTVDKVLDTRGKFIMSVAWSPDGRYIASGAEGGSVYLFDVSQGKMLHTIEAHAQAV 634
+ + T + + + + S+ W +Y+A+G G+V ++D G +HT H AV
Sbjct: 315 DLQHST-PRFICEHEEGVTSLTWIGTSKYLATGCANGTVSIWDSLLGNCVHTYHGHQDAV 373
Query: 635 R 637
+
Sbjct: 374 Q 374
Score = 36.3 bits (80), Expect = 0.017
Identities = 29/142 (20%), Positives = 55/142 (38%), Gaps = 3/142 (2%)
Frame = +2
Query: 149 KDYIVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETIAXXXXXXXXXXX 328
+ +IV G ++ +W + +K L+ GH + V +PDG+ I
Sbjct: 166 RGHIVLAGSEDC-SLWMWNADKEAYLNMFSGHNLNVTCGDFTPDGKLICTGSDDASLIVW 224
Query: 329 XXXXGQKIREIQ---TDSSDMWKIVFSPDGSQVATGGHTGKVTVYGIINGTVDKVLDTRG 499
+ I ++ + + + + + S +G G V + I+ G V L++
Sbjct: 225 NPKTCESIHIVKGHPYHTEGLTCLDINSNSSLAISGSKDGSVHIVNIVTGKVVSSLNSHT 284
Query: 500 KFIMSVAWSPDGRYIASGAEGG 565
+ V +SP I A GG
Sbjct: 285 DSVECVKFSPSSATIPLAATGG 306
Score = 27.9 bits (59), Expect = 6.0
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 140 GPSKDYIVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETI 292
G SK Y+ TG + V +W ++ +HT GH+ V +++VS + + I
Sbjct: 338 GTSK-YLATGCANGTVSIW--DSLLGNCVHTYHGHQDAVQAISVSTNTDFI 385
>At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p80
subunit, putative contains 5 WD-40 repeats (PF00400);
similar to katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 1180
Score = 60.1 bits (139), Expect = 1e-09
Identities = 44/176 (25%), Positives = 76/176 (43%)
Frame = +2
Query: 110 ANINHSTDSKGPSKDYIVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGET 289
AN+N + K S+ +I TGG D V +W+ K L +L GH V SVA
Sbjct: 16 ANVNCLSIGKKTSRLFI-TGGDDYKVNLWAI--GKPTSLMSLCGHTSAVDSVAFDSAEVL 72
Query: 290 IAXXXXXXXXXXXXXXXGQKIREIQTDSSDMWKIVFSPDGSQVATGGHTGKVTVYGIING 469
+ + +R S+ + F P G +A+G + ++ I
Sbjct: 73 VLAGASSGVIKLWDVEEAKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDANLKIWDIRKK 132
Query: 470 TVDKVLDTRGKFIMSVAWSPDGRYIASGAEGGSVYLFDVSQGKMLHTIEAHAQAVR 637
+ + I ++ ++PDGR++ SG V ++D++ GK+LH + H +R
Sbjct: 133 GCIQTYKGHSRGISTIRFTPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKFHEGPIR 188
Score = 40.3 bits (90), Expect = 0.001
Identities = 29/141 (20%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Frame = +2
Query: 143 PSKDYIVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETIAXXXXXXXXX 322
P +++ +G D +K+W K + T +GH + ++ +PDG +
Sbjct: 110 PFGEFLASGSSDANLKIWDIR--KKGCIQTYKGHSRGISTIRFTPDGRWVVSGGLDNVVK 167
Query: 323 XXXXXXGQKIREIQTDSSDMWKIVFSPDGSQVATGGHTGKVTVYGIINGTVDKVLDTRGK 502
G+ + E + + + F P +ATG V + + T + + TR +
Sbjct: 168 VWDLTAGKLLHEFKFHEGPIRSLDFHPLEFLLATGSADRTVKFWDL--ETFELIGSTRPE 225
Query: 503 F--IMSVAWSPDGRYIASGAE 559
+ S+ + PDGR + G +
Sbjct: 226 ATGVRSIKFHPDGRTLFCGLD 246
>At5g08390.1 68418.m00988 transducin family protein / WD-40 repeat
family protein similar to katanin p80 subunit
[Strongylocentrotus purpuratus] GI:3005601; contains
Pfam profile PF00400: WD domain, G-beta repeat
Length = 871
Score = 57.6 bits (133), Expect = 6e-09
Identities = 38/159 (23%), Positives = 68/159 (42%)
Frame = +2
Query: 146 SKDYIVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETIAXXXXXXXXXX 325
S +VTGG D+ V +W+ K + +L GH + SV +A
Sbjct: 121 SSRVLVTGGEDHKVNLWAI--GKPNAILSLYGHSSGIDSVTFDASEGLVAAGAASGTIKL 178
Query: 326 XXXXXGQKIREIQTDSSDMWKIVFSPDGSQVATGGHTGKVTVYGIINGTVDKVLDTRGKF 505
+ +R + S+ + F P G A+G + ++ I +
Sbjct: 179 WDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRG 238
Query: 506 IMSVAWSPDGRYIASGAEGGSVYLFDVSQGKMLHTIEAH 622
+ + ++PDGR+I SG E V ++D++ GK+LH ++H
Sbjct: 239 VNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSH 277
Score = 46.4 bits (105), Expect = 2e-05
Identities = 36/164 (21%), Positives = 65/164 (39%)
Frame = +2
Query: 146 SKDYIVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETIAXXXXXXXXXX 325
S+ + G +K+W E K+ + TL GH VSV P GE A
Sbjct: 163 SEGLVAAGAASGTIKLWDLEEAKV--VRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKI 220
Query: 326 XXXXXGQKIREIQTDSSDMWKIVFSPDGSQVATGGHTGKVTVYGIINGTVDKVLDTRGKF 505
I + + + + F+PDG + +GG V V+ + G + +
Sbjct: 221 WDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGK 280
Query: 506 IMSVAWSPDGRYIASGAEGGSVYLFDVSQGKMLHTIEAHAQAVR 637
I S+ + P +A+G+ +V +D+ +++ + VR
Sbjct: 281 IQSLDFHPHEFLLATGSADKTVKFWDLETFELIGSGGTETTGVR 324
Score = 43.6 bits (98), Expect = 1e-04
Identities = 28/95 (29%), Positives = 42/95 (44%)
Frame = +2
Query: 143 PSKDYIVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETIAXXXXXXXXX 322
P +IV+GG DN+VKVW K LLH + HE + S+ P +A
Sbjct: 246 PDGRWIVSGGEDNVVKVWDLTAGK--LLHEFKSHEGKIQSLDFHPHEFLLATGSADKTVK 303
Query: 323 XXXXXXGQKIREIQTDSSDMWKIVFSPDGSQVATG 427
+ I T+++ + + F+PDG V G
Sbjct: 304 FWDLETFELIGSGGTETTGVRCLTFNPDGKSVLCG 338
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/88 (23%), Positives = 42/88 (47%)
Frame = +2
Query: 371 SSDMWKIVFSPDGSQVATGGHTGKVTVYGIINGTVDKVLDTRGKFIMSVAWSPDGRYIAS 550
SS + + F VA G +G + ++ + V + L +SV + P G + AS
Sbjct: 152 SSGIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFAS 211
Query: 551 GAEGGSVYLFDVSQGKMLHTIEAHAQAV 634
G+ ++ ++D+ + +HT + H + V
Sbjct: 212 GSLDTNLKIWDIRKKGCIHTYKGHTRGV 239
>At1g48630.1 68414.m05440 guanine nucleotide-binding family protein
/ activated protein kinase C receptor, putative / RACK,
putative contains 7 WD-40 repeats (PF00400); very
similar to guanine nucleotide-binding protein; activated
protein kinase C receptor; RACK1 (GI:9294068)
{Arabidopsis thaliana}; similar to WD-40 repeat
auxin-dependent protein ARCA (SP:O24456) [Arabidopsis
thaliana];
Length = 326
Score = 55.6 bits (128), Expect = 3e-08
Identities = 52/198 (26%), Positives = 82/198 (41%), Gaps = 9/198 (4%)
Frame = +2
Query: 53 SILLKKENAHEDLIYGCAWANI---NHSTDSKGPSKD--YIVTGGLDNLVKVWSYENNKL 217
SI+L K ED YG A + +H S D + ++G D +++W
Sbjct: 39 SIILWKLTK-EDKSYGVAQRRMTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATG-- 95
Query: 218 ELLHTLEGHEMPVVSVAVSPDGETIAXXXXXXXXXXXXXXXGQKIREIQTDSSDMWK--I 391
E GH V+SVA S D I K + D W +
Sbjct: 96 ESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEADGHKEWVSCV 155
Query: 392 VFSPDG--SQVATGGHTGKVTVYGIINGTVDKVLDTRGKFIMSVAWSPDGRYIASGAEGG 565
FSP+ + + V V+ + N + L ++ +VA SPDG ASG + G
Sbjct: 156 RFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDG 215
Query: 566 SVYLFDVSQGKMLHTIEA 619
+ L+D+++GK L+++EA
Sbjct: 216 VILLWDLAEGKKLYSLEA 233
Score = 44.0 bits (99), Expect = 9e-05
Identities = 28/83 (33%), Positives = 41/83 (49%)
Frame = +2
Query: 158 IVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETIAXXXXXXXXXXXXXX 337
IV+ D VKVW+ +N KL +TL GH + +VAVSPDG A
Sbjct: 166 IVSASWDKTVKVWNLQNCKLR--NTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLA 223
Query: 338 XGQKIREIQTDSSDMWKIVFSPD 406
G+K+ ++ S + + FSP+
Sbjct: 224 EGKKLYSLEA-GSIIHSLCFSPN 245
>At3g18130.1 68416.m02305 guanine nucleotide-binding family protein
/ activated protein kinase C receptor (RACK1) identical
to guanine nucleotide-binding protein; activated protein
kinase C receptor; RACK1 (GI:9294068) {Arabidopsis
thaliana}; contains Pfam profile: PF00400 WD domain,
G-beta repeat (7 copies)
Length = 326
Score = 54.0 bits (124), Expect = 8e-08
Identities = 51/198 (25%), Positives = 83/198 (41%), Gaps = 9/198 (4%)
Frame = +2
Query: 53 SILLKKENAHEDLIYGCAWANI---NHSTDSKGPSKD--YIVTGGLDNLVKVWSYENNKL 217
SI+L K +D YG A + +H + S D + ++G D +++W
Sbjct: 39 SIILWKLTK-DDKSYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATG-- 95
Query: 218 ELLHTLEGHEMPVVSVAVSPDGETIAXXXXXXXXXXXXXXXGQKIREIQTDSSDMWK--I 391
E GH V+SVA S D I K + D W +
Sbjct: 96 ETTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEGDGHKEWVSCV 155
Query: 392 VFSPDG--SQVATGGHTGKVTVYGIINGTVDKVLDTRGKFIMSVAWSPDGRYIASGAEGG 565
FSP+ + + V V+ + N + L ++ +VA SPDG ASG + G
Sbjct: 156 RFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDG 215
Query: 566 SVYLFDVSQGKMLHTIEA 619
+ L+D+++GK L+++EA
Sbjct: 216 VILLWDLAEGKKLYSLEA 233
Score = 41.9 bits (94), Expect = 3e-04
Identities = 27/83 (32%), Positives = 41/83 (49%)
Frame = +2
Query: 158 IVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETIAXXXXXXXXXXXXXX 337
IV+ D VKVW+ +N KL ++L GH + +VAVSPDG A
Sbjct: 166 IVSASWDKTVKVWNLQNCKLR--NSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLA 223
Query: 338 XGQKIREIQTDSSDMWKIVFSPD 406
G+K+ ++ S + + FSP+
Sbjct: 224 EGKKLYSLEA-GSIIHSLCFSPN 245
>At5g23430.2 68418.m02749 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 836
Score = 52.8 bits (121), Expect = 2e-07
Identities = 36/159 (22%), Positives = 67/159 (42%)
Frame = +2
Query: 146 SKDYIVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETIAXXXXXXXXXX 325
S +VTGG D+ V +W+ K + +L GH + SV +A
Sbjct: 28 SSRVLVTGGEDHKVNLWAI--GKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKL 85
Query: 326 XXXXXGQKIREIQTDSSDMWKIVFSPDGSQVATGGHTGKVTVYGIINGTVDKVLDTRGKF 505
+ +R + S+ + F P G A+G + ++ I +
Sbjct: 86 WDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRG 145
Query: 506 IMSVAWSPDGRYIASGAEGGSVYLFDVSQGKMLHTIEAH 622
+ + ++PDGR++ SG E V ++D++ GK+L ++H
Sbjct: 146 VNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSH 184
Score = 45.2 bits (102), Expect = 4e-05
Identities = 34/153 (22%), Positives = 62/153 (40%)
Frame = +2
Query: 146 SKDYIVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETIAXXXXXXXXXX 325
S+ + G +K+W E K+ + TL GH +SV P GE A
Sbjct: 70 SEVLVAAGAASGTIKLWDLEEAKI--VRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKI 127
Query: 326 XXXXXGQKIREIQTDSSDMWKIVFSPDGSQVATGGHTGKVTVYGIINGTVDKVLDTRGKF 505
I + + + + F+PDG V +GG V V+ + G + +
Sbjct: 128 WDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQ 187
Query: 506 IMSVAWSPDGRYIASGAEGGSVYLFDVSQGKML 604
I S+ + P +A+G+ +V +D+ +++
Sbjct: 188 IQSLDFHPHEFLLATGSADRTVKFWDLETFELI 220
Score = 39.1 bits (87), Expect = 0.002
Identities = 20/88 (22%), Positives = 42/88 (47%)
Frame = +2
Query: 371 SSDMWKIVFSPDGSQVATGGHTGKVTVYGIINGTVDKVLDTRGKFIMSVAWSPDGRYIAS 550
SS + + F VA G +G + ++ + + + L +SV + P G + AS
Sbjct: 59 SSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFAS 118
Query: 551 GAEGGSVYLFDVSQGKMLHTIEAHAQAV 634
G+ ++ ++D+ + +HT + H + V
Sbjct: 119 GSLDTNLKIWDIRKKGCIHTYKGHTRGV 146
Score = 35.9 bits (79), Expect = 0.023
Identities = 25/95 (26%), Positives = 40/95 (42%)
Frame = +2
Query: 143 PSKDYIVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETIAXXXXXXXXX 322
P ++V+GG DN+VKVW K LL + HE + S+ P +A
Sbjct: 153 PDGRWVVSGGEDNIVKVWDLTAGK--LLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVK 210
Query: 323 XXXXXXGQKIREIQTDSSDMWKIVFSPDGSQVATG 427
+ I +++ + + F+PDG V G
Sbjct: 211 FWDLETFELIGSGGPETAGVRCLSFNPDGKTVLCG 245
>At5g23430.1 68418.m02748 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 837
Score = 52.8 bits (121), Expect = 2e-07
Identities = 36/159 (22%), Positives = 67/159 (42%)
Frame = +2
Query: 146 SKDYIVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETIAXXXXXXXXXX 325
S +VTGG D+ V +W+ K + +L GH + SV +A
Sbjct: 28 SSRVLVTGGEDHKVNLWAI--GKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKL 85
Query: 326 XXXXXGQKIREIQTDSSDMWKIVFSPDGSQVATGGHTGKVTVYGIINGTVDKVLDTRGKF 505
+ +R + S+ + F P G A+G + ++ I +
Sbjct: 86 WDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRG 145
Query: 506 IMSVAWSPDGRYIASGAEGGSVYLFDVSQGKMLHTIEAH 622
+ + ++PDGR++ SG E V ++D++ GK+L ++H
Sbjct: 146 VNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSH 184
Score = 45.2 bits (102), Expect = 4e-05
Identities = 34/153 (22%), Positives = 62/153 (40%)
Frame = +2
Query: 146 SKDYIVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETIAXXXXXXXXXX 325
S+ + G +K+W E K+ + TL GH +SV P GE A
Sbjct: 70 SEVLVAAGAASGTIKLWDLEEAKI--VRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKI 127
Query: 326 XXXXXGQKIREIQTDSSDMWKIVFSPDGSQVATGGHTGKVTVYGIINGTVDKVLDTRGKF 505
I + + + + F+PDG V +GG V V+ + G + +
Sbjct: 128 WDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQ 187
Query: 506 IMSVAWSPDGRYIASGAEGGSVYLFDVSQGKML 604
I S+ + P +A+G+ +V +D+ +++
Sbjct: 188 IQSLDFHPHEFLLATGSADRTVKFWDLETFELI 220
Score = 39.1 bits (87), Expect = 0.002
Identities = 20/88 (22%), Positives = 42/88 (47%)
Frame = +2
Query: 371 SSDMWKIVFSPDGSQVATGGHTGKVTVYGIINGTVDKVLDTRGKFIMSVAWSPDGRYIAS 550
SS + + F VA G +G + ++ + + + L +SV + P G + AS
Sbjct: 59 SSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFAS 118
Query: 551 GAEGGSVYLFDVSQGKMLHTIEAHAQAV 634
G+ ++ ++D+ + +HT + H + V
Sbjct: 119 GSLDTNLKIWDIRKKGCIHTYKGHTRGV 146
Score = 35.9 bits (79), Expect = 0.023
Identities = 25/95 (26%), Positives = 40/95 (42%)
Frame = +2
Query: 143 PSKDYIVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETIAXXXXXXXXX 322
P ++V+GG DN+VKVW K LL + HE + S+ P +A
Sbjct: 153 PDGRWVVSGGEDNIVKVWDLTAGK--LLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVK 210
Query: 323 XXXXXXGQKIREIQTDSSDMWKIVFSPDGSQVATG 427
+ I +++ + + F+PDG V G
Sbjct: 211 FWDLETFELIGSGGPETAGVRCLSFNPDGKTVLCG 245
>At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 WD-40
repeats ; similar to LEUNIG (GP:11141605)[Arabidopsis
thaliana]
Length = 785
Score = 52.0 bits (119), Expect = 3e-07
Identities = 35/158 (22%), Positives = 63/158 (39%), Gaps = 1/158 (0%)
Frame = +2
Query: 143 PSKDYIVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETIAXXXXXXXXX 322
P+ + T D +K+W + L T+ GH PV+S+ P +
Sbjct: 560 PNSTQLATSSFDKTIKIWDASDPGY-FLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDI 618
Query: 323 XXXXXXGQKIREIQTDSSDMWKIVFSPDGSQVATGGHTGKVTVYGIINGTVD-KVLDTRG 499
+R ++ S+ ++ F P Q V+++ I N +
Sbjct: 619 RFWDINASCVRAVKGAST---QVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHS 675
Query: 500 KFIMSVAWSPDGRYIASGAEGGSVYLFDVSQGKMLHTI 613
+ SV WSP+G +AS +E +V L+ +S G +H +
Sbjct: 676 SNVHSVCWSPNGELVASVSE-DAVKLWSLSSGDCIHEL 712
Score = 40.7 bits (91), Expect = 8e-04
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +2
Query: 395 FSPDGSQVATGGHTGKVTVYGIINGTVDKVLDTRGKFIMSVAWSPDGRYIASGAEGGSVY 574
FS DG +A+ GH KV ++ + V+ + I V + P+ +A+ + ++
Sbjct: 516 FSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIK 575
Query: 575 LFDVSQ-GKMLHTIEAHAQAV 634
++D S G L TI HA V
Sbjct: 576 IWDASDPGYFLRTISGHAAPV 596
>At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 WD-40
repeats ; similar to LEUNIG (GP:11141605)[Arabidopsis
thaliana]
Length = 787
Score = 52.0 bits (119), Expect = 3e-07
Identities = 35/158 (22%), Positives = 63/158 (39%), Gaps = 1/158 (0%)
Frame = +2
Query: 143 PSKDYIVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETIAXXXXXXXXX 322
P+ + T D +K+W + L T+ GH PV+S+ P +
Sbjct: 562 PNSTQLATSSFDKTIKIWDASDPGY-FLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDI 620
Query: 323 XXXXXXGQKIREIQTDSSDMWKIVFSPDGSQVATGGHTGKVTVYGIINGTVD-KVLDTRG 499
+R ++ S+ ++ F P Q V+++ I N +
Sbjct: 621 RFWDINASCVRAVKGAST---QVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHS 677
Query: 500 KFIMSVAWSPDGRYIASGAEGGSVYLFDVSQGKMLHTI 613
+ SV WSP+G +AS +E +V L+ +S G +H +
Sbjct: 678 SNVHSVCWSPNGELVASVSE-DAVKLWSLSSGDCIHEL 714
Score = 40.7 bits (91), Expect = 8e-04
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +2
Query: 395 FSPDGSQVATGGHTGKVTVYGIINGTVDKVLDTRGKFIMSVAWSPDGRYIASGAEGGSVY 574
FS DG +A+ GH KV ++ + V+ + I V + P+ +A+ + ++
Sbjct: 518 FSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIK 577
Query: 575 LFDVSQ-GKMLHTIEAHAQAV 634
++D S G L TI HA V
Sbjct: 578 IWDASDPGYFLRTISGHAAPV 598
>At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 WD-40
repeats ; similar to LEUNIG (GP:11141605)[Arabidopsis
thaliana]
Length = 787
Score = 52.0 bits (119), Expect = 3e-07
Identities = 35/158 (22%), Positives = 63/158 (39%), Gaps = 1/158 (0%)
Frame = +2
Query: 143 PSKDYIVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETIAXXXXXXXXX 322
P+ + T D +K+W + L T+ GH PV+S+ P +
Sbjct: 562 PNSTQLATSSFDKTIKIWDASDPGY-FLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDI 620
Query: 323 XXXXXXGQKIREIQTDSSDMWKIVFSPDGSQVATGGHTGKVTVYGIINGTVD-KVLDTRG 499
+R ++ S+ ++ F P Q V+++ I N +
Sbjct: 621 RFWDINASCVRAVKGAST---QVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHS 677
Query: 500 KFIMSVAWSPDGRYIASGAEGGSVYLFDVSQGKMLHTI 613
+ SV WSP+G +AS +E +V L+ +S G +H +
Sbjct: 678 SNVHSVCWSPNGELVASVSE-DAVKLWSLSSGDCIHEL 714
Score = 40.7 bits (91), Expect = 8e-04
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +2
Query: 395 FSPDGSQVATGGHTGKVTVYGIINGTVDKVLDTRGKFIMSVAWSPDGRYIASGAEGGSVY 574
FS DG +A+ GH KV ++ + V+ + I V + P+ +A+ + ++
Sbjct: 518 FSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIK 577
Query: 575 LFDVSQ-GKMLHTIEAHAQAV 634
++D S G L TI HA V
Sbjct: 578 IWDASDPGYFLRTISGHAAPV 598
>At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 WD-40
repeats ; similar to LEUNIG (GP:11141605)[Arabidopsis
thaliana]
Length = 787
Score = 52.0 bits (119), Expect = 3e-07
Identities = 35/158 (22%), Positives = 63/158 (39%), Gaps = 1/158 (0%)
Frame = +2
Query: 143 PSKDYIVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETIAXXXXXXXXX 322
P+ + T D +K+W + L T+ GH PV+S+ P +
Sbjct: 562 PNSTQLATSSFDKTIKIWDASDPGY-FLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDI 620
Query: 323 XXXXXXGQKIREIQTDSSDMWKIVFSPDGSQVATGGHTGKVTVYGIINGTVD-KVLDTRG 499
+R ++ S+ ++ F P Q V+++ I N +
Sbjct: 621 RFWDINASCVRAVKGAST---QVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHS 677
Query: 500 KFIMSVAWSPDGRYIASGAEGGSVYLFDVSQGKMLHTI 613
+ SV WSP+G +AS +E +V L+ +S G +H +
Sbjct: 678 SNVHSVCWSPNGELVASVSE-DAVKLWSLSSGDCIHEL 714
Score = 40.7 bits (91), Expect = 8e-04
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +2
Query: 395 FSPDGSQVATGGHTGKVTVYGIINGTVDKVLDTRGKFIMSVAWSPDGRYIASGAEGGSVY 574
FS DG +A+ GH KV ++ + V+ + I V + P+ +A+ + ++
Sbjct: 518 FSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIK 577
Query: 575 LFDVSQ-GKMLHTIEAHAQAV 634
++D S G L TI HA V
Sbjct: 578 IWDASDPGYFLRTISGHAAPV 598
>At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 WD-40
repeats ; similar to LEUNIG (GP:11141605)[Arabidopsis
thaliana]
Length = 787
Score = 52.0 bits (119), Expect = 3e-07
Identities = 35/158 (22%), Positives = 63/158 (39%), Gaps = 1/158 (0%)
Frame = +2
Query: 143 PSKDYIVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETIAXXXXXXXXX 322
P+ + T D +K+W + L T+ GH PV+S+ P +
Sbjct: 562 PNSTQLATSSFDKTIKIWDASDPGY-FLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDI 620
Query: 323 XXXXXXGQKIREIQTDSSDMWKIVFSPDGSQVATGGHTGKVTVYGIINGTVD-KVLDTRG 499
+R ++ S+ ++ F P Q V+++ I N +
Sbjct: 621 RFWDINASCVRAVKGAST---QVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHS 677
Query: 500 KFIMSVAWSPDGRYIASGAEGGSVYLFDVSQGKMLHTI 613
+ SV WSP+G +AS +E +V L+ +S G +H +
Sbjct: 678 SNVHSVCWSPNGELVASVSE-DAVKLWSLSSGDCIHEL 714
Score = 40.7 bits (91), Expect = 8e-04
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +2
Query: 395 FSPDGSQVATGGHTGKVTVYGIINGTVDKVLDTRGKFIMSVAWSPDGRYIASGAEGGSVY 574
FS DG +A+ GH KV ++ + V+ + I V + P+ +A+ + ++
Sbjct: 518 FSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIK 577
Query: 575 LFDVSQ-GKMLHTIEAHAQAV 634
++D S G L TI HA V
Sbjct: 578 IWDASDPGYFLRTISGHAAPV 598
>At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless
protein, putative similar to notchless [Xenopus laevis]
GI:3687833; contains Pfam PF00400: WD domain, G-beta
repeat (8 copies)
Length = 473
Score = 51.6 bits (118), Expect = 4e-07
Identities = 21/71 (29%), Positives = 42/71 (59%)
Frame = +2
Query: 389 IVFSPDGSQVATGGHTGKVTVYGIINGTVDKVLDTRGKFIMSVAWSPDGRYIASGAEGGS 568
+ FSPDG Q+A+G V ++ + T ++++VAWSPDG+++ SG++ G
Sbjct: 115 VSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPDGKHLVSGSKSGE 174
Query: 569 VYLFDVSQGKM 601
+ ++ +G++
Sbjct: 175 ICCWNPKKGEL 185
Score = 51.6 bits (118), Expect = 4e-07
Identities = 34/142 (23%), Positives = 62/142 (43%)
Frame = +2
Query: 134 SKGPSKDYIVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETIAXXXXXX 313
+KG S + +V+G D + +W +K + L GH+ V V SPDG+ IA
Sbjct: 324 TKGDSPERLVSGSDDFTMFLWEPSVSK-QPKKRLTGHQQLVNHVYFSPDGKWIASASFDK 382
Query: 314 XXXXXXXXXGQKIREIQTDSSDMWKIVFSPDGSQVATGGHTGKVTVYGIINGTVDKVLDT 493
GQ + + ++++ +S D + +G + ++ I + + L
Sbjct: 383 SVRLWNGITGQFVTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPG 442
Query: 494 RGKFIMSVAWSPDGRYIASGAE 559
+ +V WSPDG + SG +
Sbjct: 443 HADEVFAVDWSPDGEKVVSGGK 464
Score = 45.2 bits (102), Expect = 4e-05
Identities = 31/142 (21%), Positives = 63/142 (44%), Gaps = 7/142 (4%)
Frame = +2
Query: 230 TLEGHEMPVVSVAVSPDGETIAXXXXXXXXXXXXXXXGQKIREIQTDSSDMWKIVFSPDG 409
T+ GH V+ V+ SPDG+ +A + + + + + +SPDG
Sbjct: 104 TIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPDG 163
Query: 410 SQVATGGHTGKVTVYGIINGTVD-KVLDTRGKFIMSVAW------SPDGRYIASGAEGGS 568
+ +G +G++ + G ++ L K+I ++W SP R++ S ++ G
Sbjct: 164 KHLVSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEPVHLSSPCRRFVTS-SKDGD 222
Query: 569 VYLFDVSQGKMLHTIEAHAQAV 634
++D++ K + + H AV
Sbjct: 223 ARIWDITLKKSIICLSGHTLAV 244
Score = 43.2 bits (97), Expect = 1e-04
Identities = 21/82 (25%), Positives = 39/82 (47%)
Frame = +2
Query: 389 IVFSPDGSQVATGGHTGKVTVYGIINGTVDKVLDTRGKFIMSVAWSPDGRYIASGAEGGS 568
+ FSPDG +A+ V ++ I G V + V+WS D R + SG++ +
Sbjct: 366 VYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWSADSRLLLSGSKDST 425
Query: 569 VYLFDVSQGKMLHTIEAHAQAV 634
+ ++++ K+ + HA V
Sbjct: 426 LKIWEIRTKKLKQDLPGHADEV 447
Score = 36.7 bits (81), Expect = 0.013
Identities = 36/169 (21%), Positives = 66/169 (39%), Gaps = 6/169 (3%)
Frame = +2
Query: 134 SKGPSKDYIVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETIAXXXXXX 313
S P + +G D V++W L T +GH+ V++VA SPDG+ +
Sbjct: 116 SFSPDGKQLASGSGDTTVRLWDLYTETP--LFTCKGHKNWVLTVAWSPDGKHLVSGSKSG 173
Query: 314 XXXXXXXXXGQKIREIQTD-----SSDMWKIV-FSPDGSQVATGGHTGKVTVYGIINGTV 475
G+ T + W+ V S + T G ++ I
Sbjct: 174 EICCWNPKKGELEGSPLTGHKKWITGISWEPVHLSSPCRRFVTSSKDGDARIWDITLKKS 233
Query: 476 DKVLDTRGKFIMSVAWSPDGRYIASGAEGGSVYLFDVSQGKMLHTIEAH 622
L + V W DG I +G++ ++ +++ +QGK++ ++ H
Sbjct: 234 IICLSGHTLAVTCVKWGGDG-IIYTGSQDCTIKMWETTQGKLIRELKGH 281
Score = 29.1 bits (62), Expect = 2.6
Identities = 36/160 (22%), Positives = 66/160 (41%), Gaps = 1/160 (0%)
Frame = +2
Query: 158 IVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETIAXXXXXXXXXXXXXX 337
I TG D +K+W E + +L+ L+GH + S+A+S +
Sbjct: 255 IYTGSQDCTIKMW--ETTQGKLIRELKGHGHWINSLALSTEYVLRTGAFDHTGRQYPPNE 312
Query: 338 XGQKIREIQTDSSDMWKIVFSPDGSQVATGGHTGKVTVYG-IINGTVDKVLDTRGKFIMS 514
QK E + SP+ ++ +G + ++ ++ K L + +
Sbjct: 313 EKQKALERYNKTKGD-----SPE--RLVSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNH 365
Query: 515 VAWSPDGRYIASGAEGGSVYLFDVSQGKMLHTIEAHAQAV 634
V +SPDG++IAS + SV L++ G+ + H V
Sbjct: 366 VYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRGHVGPV 405
>At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p80
subunit, putative similar to contains 6 WD-40 repeats
(PF00400); katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 974
Score = 51.6 bits (118), Expect = 4e-07
Identities = 32/136 (23%), Positives = 58/136 (42%)
Frame = +2
Query: 230 TLEGHEMPVVSVAVSPDGETIAXXXXXXXXXXXXXXXGQKIREIQTDSSDMWKIVFSPDG 409
+L GH PV SVA + + + + +R S+ + F P G
Sbjct: 2 SLCGHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFG 61
Query: 410 SQVATGGHTGKVTVYGIINGTVDKVLDTRGKFIMSVAWSPDGRYIASGAEGGSVYLFDVS 589
+A+G + V+ + + I ++ +SPDGR++ SG V ++D++
Sbjct: 62 EFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLT 121
Query: 590 QGKMLHTIEAHAQAVR 637
GK+LH + H +R
Sbjct: 122 AGKLLHEFKCHEGPIR 137
Score = 47.6 bits (108), Expect = 7e-06
Identities = 45/162 (27%), Positives = 70/162 (43%), Gaps = 6/162 (3%)
Frame = +2
Query: 125 STDSKGPSKDYIVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETIAXXX 304
ST P ++V+GGLDN+VKVW K LLH + HE P+ S+ P +A
Sbjct: 95 STIEFSPDGRWVVSGGLDNVVKVWDLTAGK--LLHEFKCHEGPIRSLDFHPLEFLLATGS 152
Query: 305 XXXXXXXXXXXXGQKIREIQTDSSDMWKIVFSPDGSQVATGGHTGKVTVYG----IINGT 472
+ I + +++ + I F PDG + G G + VY I
Sbjct: 153 ADRTVKFWDLETFELIGTTRPEATGVRAIAFHPDGQTLFCGLDDG-LKVYSWEPVICRDG 211
Query: 473 VDKVLDTRGKFIMSVAWSPDGRYIASGAEGGSV--YLFDVSQ 592
VD T G F ++ +G++I SV ++ D+S+
Sbjct: 212 VDMGWSTLGDFCIN-----EGKFIGCSYYRNSVGIWVSDISE 248
Score = 44.0 bits (99), Expect = 9e-05
Identities = 29/148 (19%), Positives = 60/148 (40%), Gaps = 1/148 (0%)
Frame = +2
Query: 143 PSKDYIVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETIAXXXXXXXXX 322
P +++ +G D ++VW + K + T +GH + ++ SPDG +
Sbjct: 59 PFGEFLASGSSDTNLRVW--DTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVK 116
Query: 323 XXXXXXGQKIREIQTDSSDMWKIVFSPDGSQVATGGHTGKVTVYGIINGTVDKVLDTRGK 502
G+ + E + + + F P +ATG V + + +
Sbjct: 117 VWDLTAGKLLHEFKCHEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFELIGTTRPEAT 176
Query: 503 FIMSVAWSPDGRYIASGAEGG-SVYLFD 583
+ ++A+ PDG+ + G + G VY ++
Sbjct: 177 GVRAIAFHPDGQTLFCGLDDGLKVYSWE 204
>At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1
protein (SCD1) contains Pfam PF02141: DENN (AEX-3)
domain; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies); identical to stomatal cytokinesis defective
[Arabidopsis thaliana] GI:19743728; supporting cDNA
gi|19743727|gb|AY082605.1|; PMID 12874123
Length = 1187
Score = 50.4 bits (115), Expect = 1e-06
Identities = 36/161 (22%), Positives = 64/161 (39%)
Frame = +2
Query: 155 YIVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETIAXXXXXXXXXXXXX 334
+ ++G D LVK+W EL TL+GH V A+S D I
Sbjct: 869 FFISGSTDCLVKIWDPSLRGSELRATLKGHTGTV--RAISSDRGKIVSGSDDLSVIVWDK 926
Query: 335 XXGQKIREIQTDSSDMWKIVFSPDGSQVATGGHTGKVTVYGIINGTVDKVLDTRGKFIMS 514
Q + E++ S + V G +V T H G V ++ + + I+S
Sbjct: 927 QTTQLLEELKGHDSQV-SCVKMLSGERVLTAAHDGTVKMWDVRTDMCVATVGRCSSAILS 985
Query: 515 VAWSPDGRYIASGAEGGSVYLFDVSQGKMLHTIEAHAQAVR 637
+ + +A+ ++D+ GK +H ++ H + +R
Sbjct: 986 LEYDDSTGILAAAGRDTVANIWDIRSGKQMHKLKGHTKWIR 1026
>At1g18080.1 68414.m02238 WD-40 repeat family protein /
auxin-dependent protein (ARCA) / guanine
nucleotide-binding protein beta subunit, putative
identical to SP|O24456 Guanine nucleotide-binding
protein beta subunit-like protein (WD-40 repeat
auxin-dependent protein ARCA) {Arabidopsis thaliana};
contains 7 WD-40 repeats (PF00400)
Length = 327
Score = 49.6 bits (113), Expect = 2e-06
Identities = 54/201 (26%), Positives = 85/201 (42%), Gaps = 10/201 (4%)
Frame = +2
Query: 53 SILLKKENAHEDLIYGCAWANI---NHSTDSKGPSKD--YIVTGGLDNLVKVWSYENNKL 217
SI+L K +D YG A + +H + S D + ++G D +++W
Sbjct: 39 SIILWKLTK-DDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVS 97
Query: 218 ELLHTLEGHEMPVVSVAVSPDGETIAXXXXXXXXXXXXXXXGQK--IREIQTDSSDMWKI 391
GH V+SVA S D I K I E D
Sbjct: 98 T--RRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSC 155
Query: 392 V-FSPDGSQ--VATGGHTGKVTVYGIINGTVDKVLDTRGKFIMSVAWSPDGRYIASGAEG 562
V FSP+ Q + + V V+ + N + L ++ +VA SPDG ASG +
Sbjct: 156 VRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKD 215
Query: 563 GSVYLFDVSQGKMLHTIEAHA 625
G V L+D+++GK L+++EA++
Sbjct: 216 GVVLLWDLAEGKKLYSLEANS 236
>At5g64630.2 68418.m08122 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 487
Score = 48.4 bits (110), Expect = 4e-06
Identities = 26/89 (29%), Positives = 47/89 (52%), Gaps = 6/89 (6%)
Frame = +2
Query: 389 IVFSPDGSQVATGGHTGKVTVYGII------NGTVDKVLDTRGKFIMSVAWSPDGRYIAS 550
I FSP G +A+G G++ ++ + + V K L K ++ + WSPD Y+ S
Sbjct: 70 IRFSPSGELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLIS 129
Query: 551 GAEGGSVYLFDVSQGKMLHTIEAHAQAVR 637
G+ S ++DV++G + ++AH V+
Sbjct: 130 GSVDNSCIIWDVNKGSVHQILDAHCHYVQ 158
Score = 46.4 bits (105), Expect = 2e-05
Identities = 32/149 (21%), Positives = 61/149 (40%), Gaps = 13/149 (8%)
Frame = +2
Query: 143 PSKDYIVTGGLDNLVKVWSYENNKLE-------LLHTLEGHEMPVVSVAVSPDGETIAXX 301
P + T G D +K+W + + E +L H V ++ SP GE +A
Sbjct: 23 PISGLLATAGADYDIKLWLINSGQAEKKVPSVSYQSSLTYHGCAVNTIRFSPSGELLASG 82
Query: 302 XXXXXXXXXXXXXGQ-----KI-REIQTDSSDMWKIVFSPDGSQVATGGHTGKVTVYGII 463
+ K+ + + D+ + +SPD + + +G ++ +
Sbjct: 83 ADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVN 142
Query: 464 NGTVDKVLDTRGKFIMSVAWSPDGRYIAS 550
G+V ++LD ++ VAW P +Y+AS
Sbjct: 143 KGSVHQILDAHCHYVQGVAWDPLAKYVAS 171
Score = 32.7 bits (71), Expect = 0.21
Identities = 20/94 (21%), Positives = 44/94 (46%), Gaps = 9/94 (9%)
Frame = +2
Query: 368 DSSDMWKIVFSPDGSQVATGGHTGKVTVYGIINGTVDKVLDT---------RGKFIMSVA 520
D + + F P +AT G + ++ I +G +K + + G + ++
Sbjct: 12 DGKPVLTVDFHPISGLLATAGADYDIKLWLINSGQAEKKVPSVSYQSSLTYHGCAVNTIR 71
Query: 521 WSPDGRYIASGAEGGSVYLFDVSQGKMLHTIEAH 622
+SP G +ASGA+GG ++++ + + + + H
Sbjct: 72 FSPSGELLASGADGGELFIWKLHPSETNQSWKVH 105
>At5g64630.1 68418.m08121 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 397
Score = 48.4 bits (110), Expect = 4e-06
Identities = 26/89 (29%), Positives = 47/89 (52%), Gaps = 6/89 (6%)
Frame = +2
Query: 389 IVFSPDGSQVATGGHTGKVTVYGII------NGTVDKVLDTRGKFIMSVAWSPDGRYIAS 550
I FSP G +A+G G++ ++ + + V K L K ++ + WSPD Y+ S
Sbjct: 70 IRFSPSGELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLIS 129
Query: 551 GAEGGSVYLFDVSQGKMLHTIEAHAQAVR 637
G+ S ++DV++G + ++AH V+
Sbjct: 130 GSVDNSCIIWDVNKGSVHQILDAHCHYVQ 158
Score = 46.4 bits (105), Expect = 2e-05
Identities = 32/149 (21%), Positives = 61/149 (40%), Gaps = 13/149 (8%)
Frame = +2
Query: 143 PSKDYIVTGGLDNLVKVWSYENNKLE-------LLHTLEGHEMPVVSVAVSPDGETIAXX 301
P + T G D +K+W + + E +L H V ++ SP GE +A
Sbjct: 23 PISGLLATAGADYDIKLWLINSGQAEKKVPSVSYQSSLTYHGCAVNTIRFSPSGELLASG 82
Query: 302 XXXXXXXXXXXXXGQ-----KI-REIQTDSSDMWKIVFSPDGSQVATGGHTGKVTVYGII 463
+ K+ + + D+ + +SPD + + +G ++ +
Sbjct: 83 ADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVN 142
Query: 464 NGTVDKVLDTRGKFIMSVAWSPDGRYIAS 550
G+V ++LD ++ VAW P +Y+AS
Sbjct: 143 KGSVHQILDAHCHYVQGVAWDPLAKYVAS 171
Score = 32.7 bits (71), Expect = 0.21
Identities = 20/94 (21%), Positives = 44/94 (46%), Gaps = 9/94 (9%)
Frame = +2
Query: 368 DSSDMWKIVFSPDGSQVATGGHTGKVTVYGIINGTVDKVLDT---------RGKFIMSVA 520
D + + F P +AT G + ++ I +G +K + + G + ++
Sbjct: 12 DGKPVLTVDFHPISGLLATAGADYDIKLWLINSGQAEKKVPSVSYQSSLTYHGCAVNTIR 71
Query: 521 WSPDGRYIASGAEGGSVYLFDVSQGKMLHTIEAH 622
+SP G +ASGA+GG ++++ + + + + H
Sbjct: 72 FSPSGELLASGADGGELFIWKLHPSETNQSWKVH 105
>At4g21530.1 68417.m03111 transducin family protein / WD-40 repeat
family protein contains 1 WD-40 repeat (PF00400);
similar to anaphase-promoting complex subunit 4
GI:6180011 [Homo sapiens]; supported by EST GB:AU237382
Length = 510
Score = 48.4 bits (110), Expect = 4e-06
Identities = 21/46 (45%), Positives = 29/46 (63%)
Frame = +2
Query: 497 GKFIMSVAWSPDGRYIASGAEGGSVYLFDVSQGKMLHTIEAHAQAV 634
GK + S+ W PDG+ IA G E G++ L DV GK+L ++ H AV
Sbjct: 64 GKPVTSLCWRPDGKAIAVGLEDGTISLHDVENGKLLRNLKPHDVAV 109
Score = 32.7 bits (71), Expect = 0.21
Identities = 15/62 (24%), Positives = 30/62 (48%)
Frame = +2
Query: 389 IVFSPDGSQVATGGHTGKVTVYGIINGTVDKVLDTRGKFIMSVAWSPDGRYIASGAEGGS 568
+ + PDG +A G G ++++ + NG + + L ++ + W DG+ + S
Sbjct: 70 LCWRPDGKAIAVGLEDGTISLHDVENGKLLRNLKPHDVAVVCLNWEEDGQSNTDESGNFS 129
Query: 569 VY 574
VY
Sbjct: 130 VY 131
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 48.0 bits (109), Expect = 5e-06
Identities = 32/115 (27%), Positives = 56/115 (48%), Gaps = 1/115 (0%)
Frame = +2
Query: 80 HEDLIYGCAWANINHSTDSKGPSKDY-IVTGGLDNLVKVWSYENNKLELLHTLEGHEMPV 256
H IY W+ T++ P+K + + D+ VK+W E K+ L + GH PV
Sbjct: 489 HTKEIYTIRWSPTGPGTNN--PNKQLTLASASFDSTVKLWDAELGKM--LCSFNGHREPV 544
Query: 257 VSVAVSPDGETIAXXXXXXXXXXXXXXXGQKIREIQTDSSDMWKIVFSPDGSQVA 421
S+A SP+GE IA G KI + T + ++++ ++ +G+++A
Sbjct: 545 YSLAFSPNGEYIASGSLDKSIHIWSIKEG-KIVKTYTGNGGIFEVCWNKEGNKIA 598
Score = 41.1 bits (92), Expect = 6e-04
Identities = 32/138 (23%), Positives = 61/138 (44%), Gaps = 11/138 (7%)
Frame = +2
Query: 230 TLEGHEMPVVSVAVSPDGETIAXXXXXXXXXXXXXXXGQKIREIQTDSSDMWKIVFSPDG 409
T GH+ V V P G +A + +++ + +++ I +SP G
Sbjct: 443 TFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHDLREHTKEIYTIRWSPTG 502
Query: 410 SQVATGGHTGKVTVYGIINGTVDKVLDTR-GKF----------IMSVAWSPDGRYIASGA 556
T ++T+ + K+ D GK + S+A+SP+G YIASG+
Sbjct: 503 P--GTNNPNKQLTLASASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGS 560
Query: 557 EGGSVYLFDVSQGKMLHT 610
S++++ + +GK++ T
Sbjct: 561 LDKSIHIWSIKEGKIVKT 578
Score = 35.5 bits (78), Expect = 0.030
Identities = 27/159 (16%), Positives = 60/159 (37%)
Frame = +2
Query: 158 IVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETIAXXXXXXXXXXXXXX 337
+ TG D ++W+ EL+ TL H+ P+ S+ + G+ +
Sbjct: 339 LATGSCDGQARIWTLNG---ELISTLSKHKGPIFSLKWNKKGDYLLTGSVDRTAVVWDVK 395
Query: 338 XGQKIREIQTDSSDMWKIVFSPDGSQVATGGHTGKVTVYGIINGTVDKVLDTRGKFIMSV 517
+ ++ + S + + + S AT + + I K + V
Sbjct: 396 AEEWKQQFEFHSGPTLDVDWRNNVS-FATSSTDSMIYLCKIGETRPAKTFTGHQGEVNCV 454
Query: 518 AWSPDGRYIASGAEGGSVYLFDVSQGKMLHTIEAHAQAV 634
W P G +AS ++ + ++++ Q +H + H + +
Sbjct: 455 KWDPTGSLLASCSDDSTAKIWNIKQSTFVHDLREHTKEI 493
Score = 28.7 bits (61), Expect = 3.4
Identities = 12/46 (26%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +2
Query: 479 KVLDTRGKFIMSVAWSPDGRYIASGAEGGSVYLFDVSQG--KMLHT 610
++L+ + + AWSP +ASG+ + ++ + +G K +HT
Sbjct: 259 RILEGHTSEVCACAWSPSASLLASGSGDATARIWSIPEGSFKAVHT 304
>At1g15440.2 68414.m01856 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 860
Score = 48.0 bits (109), Expect = 5e-06
Identities = 41/179 (22%), Positives = 78/179 (43%), Gaps = 21/179 (11%)
Frame = +2
Query: 143 PSKDYIVTGGLDNL-VKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETIAXXXXXXXX 319
PS D + G LD+ + VWS + +++ + L GHE PV + SP + +A
Sbjct: 444 PSGDVVCAGTLDSFEIFVWSKKTGQIKDI--LSGHEAPVHGLMFSPLTQLLASSSWDYTV 501
Query: 320 XXXXXXXGQKIREIQTDSSDMWKIVFSPDGSQVATGGHTGKV----TVYGIINGTVD--- 478
+ E + D+ + F PDG Q+A+ G++ T+ G++ T++
Sbjct: 502 RLWDVFASKGTVETFRHNHDVLTVAFRPDGKQLASSTLDGQINFWDTIEGVLMYTIEGRR 561
Query: 479 -----KVLDTR--------GKFIMSVAWSPDGRYIASGAEGGSVYLFDVSQGKMLHTIE 616
+V+ R GK ++ +S DG YI + + ++D++ +L +
Sbjct: 562 DIAGGRVMTDRRSAANSSSGKCFTTLCYSADGGYILAAGTSRYICMYDIADQVLLRRFQ 620
Score = 46.4 bits (105), Expect = 2e-05
Identities = 33/156 (21%), Positives = 69/156 (44%), Gaps = 3/156 (1%)
Frame = +2
Query: 158 IVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETIAXXXXXXXXXXXXXX 337
+++ LD V+ W ++ K +T VS+ P G+ +
Sbjct: 406 LLSASLDGTVRAWDFKRYKNYKTYTTPTPRQ-FVSLTADPSGDVVCAGTLDSFEIFVWSK 464
Query: 338 XGQKIREIQTD-SSDMWKIVFSPDGSQVATGGHTGKVTVYGII--NGTVDKVLDTRGKFI 508
+I++I + + + ++FSP +A+ V ++ + GTV+ +
Sbjct: 465 KTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVETFRHNHD--V 522
Query: 509 MSVAWSPDGRYIASGAEGGSVYLFDVSQGKMLHTIE 616
++VA+ PDG+ +AS G + +D +G +++TIE
Sbjct: 523 LTVAFRPDGKQLASSTLDGQINFWDTIEGVLMYTIE 558
Score = 35.1 bits (77), Expect = 0.040
Identities = 18/74 (24%), Positives = 34/74 (45%)
Frame = +2
Query: 389 IVFSPDGSQVATGGHTGKVTVYGIINGTVDKVLDTRGKFIMSVAWSPDGRYIASGAEGGS 568
+ +SPD +ATG KV V+ +++GT + ++ + D + S + G+
Sbjct: 355 VTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNHSLLSASLDGT 414
Query: 569 VYLFDVSQGKMLHT 610
V +D + K T
Sbjct: 415 VRAWDFKRYKNYKT 428
Score = 32.3 bits (70), Expect = 0.28
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +2
Query: 482 VLDTRGKF--IMSVAWSPDGRYIASGAEGGSVYLFDVSQGKMLHTIEAHAQAV 634
+L +G + + V +SPD + +A+GA+ V +++V G T H AV
Sbjct: 342 ILKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAV 394
>At1g15440.1 68414.m01855 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 900
Score = 48.0 bits (109), Expect = 5e-06
Identities = 41/179 (22%), Positives = 78/179 (43%), Gaps = 21/179 (11%)
Frame = +2
Query: 143 PSKDYIVTGGLDNL-VKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETIAXXXXXXXX 319
PS D + G LD+ + VWS + +++ + L GHE PV + SP + +A
Sbjct: 484 PSGDVVCAGTLDSFEIFVWSKKTGQIKDI--LSGHEAPVHGLMFSPLTQLLASSSWDYTV 541
Query: 320 XXXXXXXGQKIREIQTDSSDMWKIVFSPDGSQVATGGHTGKV----TVYGIINGTVD--- 478
+ E + D+ + F PDG Q+A+ G++ T+ G++ T++
Sbjct: 542 RLWDVFASKGTVETFRHNHDVLTVAFRPDGKQLASSTLDGQINFWDTIEGVLMYTIEGRR 601
Query: 479 -----KVLDTR--------GKFIMSVAWSPDGRYIASGAEGGSVYLFDVSQGKMLHTIE 616
+V+ R GK ++ +S DG YI + + ++D++ +L +
Sbjct: 602 DIAGGRVMTDRRSAANSSSGKCFTTLCYSADGGYILAAGTSRYICMYDIADQVLLRRFQ 660
Score = 46.4 bits (105), Expect = 2e-05
Identities = 33/156 (21%), Positives = 69/156 (44%), Gaps = 3/156 (1%)
Frame = +2
Query: 158 IVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETIAXXXXXXXXXXXXXX 337
+++ LD V+ W ++ K +T VS+ P G+ +
Sbjct: 446 LLSASLDGTVRAWDFKRYKNYKTYTTPTPRQ-FVSLTADPSGDVVCAGTLDSFEIFVWSK 504
Query: 338 XGQKIREIQTD-SSDMWKIVFSPDGSQVATGGHTGKVTVYGII--NGTVDKVLDTRGKFI 508
+I++I + + + ++FSP +A+ V ++ + GTV+ +
Sbjct: 505 KTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVETFRHNHD--V 562
Query: 509 MSVAWSPDGRYIASGAEGGSVYLFDVSQGKMLHTIE 616
++VA+ PDG+ +AS G + +D +G +++TIE
Sbjct: 563 LTVAFRPDGKQLASSTLDGQINFWDTIEGVLMYTIE 598
Score = 35.1 bits (77), Expect = 0.040
Identities = 18/74 (24%), Positives = 34/74 (45%)
Frame = +2
Query: 389 IVFSPDGSQVATGGHTGKVTVYGIINGTVDKVLDTRGKFIMSVAWSPDGRYIASGAEGGS 568
+ +SPD +ATG KV V+ +++GT + ++ + D + S + G+
Sbjct: 395 VTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNHSLLSASLDGT 454
Query: 569 VYLFDVSQGKMLHT 610
V +D + K T
Sbjct: 455 VRAWDFKRYKNYKT 468
Score = 32.3 bits (70), Expect = 0.28
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +2
Query: 482 VLDTRGKF--IMSVAWSPDGRYIASGAEGGSVYLFDVSQGKMLHTIEAHAQAV 634
+L +G + + V +SPD + +A+GA+ V +++V G T H AV
Sbjct: 382 ILKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAV 434
>At3g42660.1 68416.m04436 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400); AND-1
protein - Homo sapiens, EMBL:AJ006266
Length = 951
Score = 46.8 bits (106), Expect = 1e-05
Identities = 35/134 (26%), Positives = 60/134 (44%), Gaps = 10/134 (7%)
Frame = +2
Query: 221 LLHTLEGHEMPVVSVAVSPDGETIAXXXXXXXXXXXXXXXGQ---KIREIQTDSSDMWKI 391
++ L+GH+ PV + P+GE +A G ++ + D+ I
Sbjct: 138 IVRVLKGHKGPVTGLDFHPNGELLASIDTTGTVLCWELQNGVVSFTLKGVAPDTGFNTSI 197
Query: 392 V----FSPDGSQVATGGHTGKVTVYGIINGTVDKVLDTRGKFIMSVA---WSPDGRYIAS 550
V +SPDG +A G V +Y G +K+ RG + ++ W+P+G+YIA+
Sbjct: 198 VNIPRWSPDGRTLAVPGLRNDVVMYDRFTG--EKLFALRGDHLEAICYLTWAPNGKYIAT 255
Query: 551 GAEGGSVYLFDVSQ 592
V L+DV +
Sbjct: 256 SGLDKQVLLWDVDK 269
Score = 45.6 bits (103), Expect = 3e-05
Identities = 36/167 (21%), Positives = 70/167 (41%), Gaps = 8/167 (4%)
Frame = +2
Query: 158 IVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETIAXXXXXXXXXXXXXX 337
+ +G +D+ VK++ + + + + + +P+ +A + G +A
Sbjct: 77 LASGSIDHCVKLYKFPSGEFQT--NITRFTLPIRVLAFNGSGSLLAAAGDDEGIKLINTF 134
Query: 338 XGQKIREIQTDSSDMWKIVFSPDGSQVATGGHTGKVTVYGIINGTVDKVL-----DT--R 496
G +R ++ + + F P+G +A+ TG V + + NG V L DT
Sbjct: 135 DGSIVRVLKGHKGPVTGLDFHPNGELLASIDTTGTVLCWELQNGVVSFTLKGVAPDTGFN 194
Query: 497 GKFIMSVAWSPDGRYIASGAEGGSVYLFDVSQGKMLHTIEA-HAQAV 634
+ WSPDGR +A V ++D G+ L + H +A+
Sbjct: 195 TSIVNIPRWSPDGRTLAVPGLRNDVVMYDRFTGEKLFALRGDHLEAI 241
>At5g13480.1 68418.m01554 WD-40 repeat family protein similar to
WD-repeat protein WDC146 (SP:Q9C0J8|) {Homo sapiens};
contains 3 weak Pfam PF00400: WD domain, G-beta repeats;
Length = 711
Score = 46.0 bits (104), Expect = 2e-05
Identities = 19/84 (22%), Positives = 46/84 (54%)
Frame = +2
Query: 386 KIVFSPDGSQVATGGHTGKVTVYGIINGTVDKVLDTRGKFIMSVAWSPDGRYIASGAEGG 565
+++++P G ++ TG +G+ T++ + + +L + I S+ WS + Y+ SG +GG
Sbjct: 128 RVLWTPSGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQPIRSMVWSHNENYMVSGDDGG 187
Query: 566 SVYLFDVSQGKMLHTIEAHAQAVR 637
++ + + + AH +++R
Sbjct: 188 TLKYWQNNMNNVKANKTAHKESIR 211
Score = 45.6 bits (103), Expect = 3e-05
Identities = 36/164 (21%), Positives = 72/164 (43%), Gaps = 7/164 (4%)
Frame = +2
Query: 86 DLIYGCAWANINHSTDSKG----PSKDYIVTGGLDNLVKVWSYENNKLELLHTLEGHEMP 253
++ +G N H D K P+K +V+GG D LVK+W + + EL +L GH+
Sbjct: 255 EIRFGVMPCNAGHGWDVKSVDWHPTKSLLVSGGKDQLVKLWDTRSGR-ELC-SLHGHKNI 312
Query: 254 VVSVAVSPDGETIAXXXXXXXXXXXXXXXGQKIREIQTDSSDMWKIVFSPDGSQ-VATGG 430
V+SV + +G + ++++ + + D+ + + P + +G
Sbjct: 313 VLSVKWNQNGNWLLTASKDQIIKLYDIRTMKELQSFRGHTKDVTSLAWHPCHEEYFVSGS 372
Query: 431 HTGKVT--VYGIINGTVDKVLDTRGKFIMSVAWSPDGRYIASGA 556
G + + G N ++ + + + +AW P G + SG+
Sbjct: 373 SDGSICHWIVGHENPQIE-IPNAHDNSVWDLAWHPIGYLLCSGS 415
Score = 34.3 bits (75), Expect = 0.069
Identities = 18/86 (20%), Positives = 40/86 (46%)
Frame = +2
Query: 377 DMWKIVFSPDGSQVATGGHTGKVTVYGIINGTVDKVLDTRGKFIMSVAWSPDGRYIASGA 556
D+ + + P S + +GG V ++ +G L ++SV W+ +G ++ + +
Sbjct: 270 DVKSVDWHPTKSLLVSGGKDQLVKLWDTRSGRELCSLHGHKNIVLSVKWNQNGNWLLTAS 329
Query: 557 EGGSVYLFDVSQGKMLHTIEAHAQAV 634
+ + L+D+ K L + H + V
Sbjct: 330 KDQIIKLYDIRTMKELQSFRGHTKDV 355
Score = 30.7 bits (66), Expect = 0.85
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +2
Query: 506 IMSVAWSPDGRYIASGAEGGSVYLFDVSQGKMLHTIEAHAQAVR 637
I V W+P GR + +G++ G L++ ++AH Q +R
Sbjct: 126 INRVLWTPSGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQPIR 169
>At3g44530.1 68416.m04786 transducin family protein / WD-40 repeat
family protein contains 6 (4 significant) WD-40 repeats
(PF0400); nuclear protein HIRA, mouse, PIR:S68141
Length = 1051
Score = 46.0 bits (104), Expect = 2e-05
Identities = 23/91 (25%), Positives = 44/91 (48%)
Frame = +2
Query: 350 IREIQTDSSDMWKIVFSPDGSQVATGGHTGKVTVYGIINGTVDKVLDTRGKFIMSVAWSP 529
+ ++ ++D+ + +SPD S +A+G V ++ + G VL + V W P
Sbjct: 111 VMTLRGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTTVLRGHLSLVKGVTWDP 170
Query: 530 DGRYIASGAEGGSVYLFDVSQGKMLHTIEAH 622
G +IAS ++ +V ++ S M H + H
Sbjct: 171 IGSFIASQSDDKTVIIWRTSDWGMAHRTDGH 201
Score = 33.5 bits (73), Expect = 0.12
Identities = 22/83 (26%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Frame = +2
Query: 359 IQTDSSDMWKIVFSPDGSQVATGGHTGKVTVYGIIN-GTVDKVLDT-RGKF--IMSVAWS 526
++ + ++ I P+G + ATGG K + N T +++L T R F + V W+
Sbjct: 9 VKHEGLQIFSIDVQPNGERFATGGGDHKSVDKDLQNIDTKERLLATLRDHFGSVNCVRWA 68
Query: 527 PDGRYIASGAEGGSVYLFDVSQG 595
+ RY+ASG++ + + + G
Sbjct: 69 KNSRYVASGSDDQVIQIHERKPG 91
Score = 30.7 bits (66), Expect = 0.85
Identities = 11/44 (25%), Positives = 24/44 (54%)
Frame = +2
Query: 506 IMSVAWSPDGRYIASGAEGGSVYLFDVSQGKMLHTIEAHAQAVR 637
++ + WSPD +ASG+ +V+++++ G + H V+
Sbjct: 121 VVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTTVLRGHLSLVK 164
Score = 28.3 bits (60), Expect = 4.5
Identities = 16/51 (31%), Positives = 21/51 (41%)
Frame = +2
Query: 143 PSKDYIVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETIA 295
P + +G LDN V +W+ + L GH V V P G IA
Sbjct: 128 PDDSMLASGSLDNTVHIWNMRTGMCTTV--LRGHLSLVKGVTWDPIGSFIA 176
Score = 27.5 bits (58), Expect = 7.9
Identities = 25/113 (22%), Positives = 43/113 (38%), Gaps = 6/113 (5%)
Frame = +2
Query: 230 TLEGHEMPVVSVAVSPDGETIAXXXXXXXXXXXXXXXGQKIREIQTDSSDMWKIVFSPDG 409
TL GH VV + SPD +A G ++ S + + + P G
Sbjct: 113 TLRGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTTVLRGHLSLVKGVTWDPIG 172
Query: 410 SQVATGGHTGKVTV-----YGIINGTVDKVLDTRGK-FIMSVAWSPDGRYIAS 550
S +A+ V + +G+ + T + G F + WSP G ++ +
Sbjct: 173 SFIASQSDDKTVIIWRTSDWGMAHRTDGHWAKSLGSTFFRRLGWSPCGHFLTT 225
>At5g08560.1 68418.m01018 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 589
Score = 44.8 bits (101), Expect = 5e-05
Identities = 27/144 (18%), Positives = 54/144 (37%), Gaps = 1/144 (0%)
Frame = +2
Query: 155 YIVTGGLDNLVKVWSYE-NNKLELLHTLEGHEMPVVSVAVSPDGETIAXXXXXXXXXXXX 331
Y+ + D +W + + L HTL GH PV+++ SPD +
Sbjct: 288 YLASSSKDQTAIIWEISADGHISLKHTLVGHHKPVIAILWSPDDRQVLTCGAEEVIRRWD 347
Query: 332 XXXGQKIREIQTDSSDMWKIVFSPDGSQVATGGHTGKVTVYGIINGTVDKVLDTRGKFIM 511
G + + + PDG + G + ++ + + R + +
Sbjct: 348 VDSGDCVHMYEKGGISPISCGWYPDGQGIIAGMTDRSICMWDLDGREKECWKGQRTQKVS 407
Query: 512 SVAWSPDGRYIASGAEGGSVYLFD 583
+A + DG+++ S + + LFD
Sbjct: 408 DIAMTDDGKWLVSVCKDSVISLFD 431
Score = 35.5 bits (78), Expect = 0.030
Identities = 19/66 (28%), Positives = 34/66 (51%)
Frame = +2
Query: 389 IVFSPDGSQVATGGHTGKVTVYGIINGTVDKVLDTRGKFIMSVAWSPDGRYIASGAEGGS 568
I++SPD QV T G + + + +G + + G +S W PDG+ I +G S
Sbjct: 325 ILWSPDDRQVLTCGAEEVIRRWDVDSGDCVHMYEKGGISPISCGWYPDGQGIIAGMTDRS 384
Query: 569 VYLFDV 586
+ ++D+
Sbjct: 385 ICMWDL 390
Score = 34.3 bits (75), Expect = 0.069
Identities = 20/94 (21%), Positives = 44/94 (46%), Gaps = 3/94 (3%)
Frame = +2
Query: 344 QKIREIQTDSSDMWKIVFSPDGSQVATGGHTGKVTVYGI-INGTVD--KVLDTRGKFIMS 514
Q + +++ + ++W + FS +G +A+ ++ I +G + L K +++
Sbjct: 265 QTAQILESHTDEVWFLQFSHNGKYLASSSKDQTAIIWEISADGHISLKHTLVGHHKPVIA 324
Query: 515 VAWSPDGRYIASGAEGGSVYLFDVSQGKMLHTIE 616
+ WSPD R + + + +DV G +H E
Sbjct: 325 ILWSPDDRQVLTCGAEEVIRRWDVDSGDCVHMYE 358
Score = 31.9 bits (69), Expect = 0.37
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +2
Query: 539 YIASGAEGGSVYLFDVSQGKMLHTIEAHAQAV 634
+IASG+E VY++ S GK++ + HA AV
Sbjct: 503 FIASGSEDSQVYIWHRSTGKLIVELPGHAGAV 534
>At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) identical to SP|Q39190 PP1/PP2A
phosphatases pleiotropic regulator PRL2 {Arabidopsis
thaliana}, GB:Q39190 from [Arabidopsis thaliana];
contains Pfam PF00400: WD domain, G-beta repeat (7
copies, 1 weak)
Length = 479
Score = 44.8 bits (101), Expect = 5e-05
Identities = 33/153 (21%), Positives = 61/153 (39%)
Frame = +2
Query: 155 YIVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETIAXXXXXXXXXXXXX 334
Y+ + G D VK W E NK ++ + GH V +A+ P + +
Sbjct: 226 YMFSAGDDKQVKCWDLEQNK--VIRSYHGHLHGVYCLALHPTLDVVLTGGRDSVCRVWDI 283
Query: 335 XXGQKIREIQTDSSDMWKIVFSPDGSQVATGGHTGKVTVYGIINGTVDKVLDTRGKFIMS 514
+I + D SD++ ++ P QV TG H + + + G + K + +
Sbjct: 284 RTKMQIFVLPHD-SDVFSVLARPTDPQVITGSHDSTIKFWDLRYGKSMATITNHKKTVRA 342
Query: 515 VAWSPDGRYIASGAEGGSVYLFDVSQGKMLHTI 613
+A P S A ++ F + +G+ H +
Sbjct: 343 MALHPKENDFVS-ASADNIKKFSLPKGEFCHNM 374
Score = 34.7 bits (76), Expect = 0.052
Identities = 31/163 (19%), Positives = 61/163 (37%), Gaps = 1/163 (0%)
Frame = +2
Query: 143 PSKDYIVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETIAXXXXXXXXX 322
P+ D ++TGG D++ +VW K+++ + H+ V SV P +
Sbjct: 264 PTLDVVLTGGRDSVCRVWDI-RTKMQIF--VLPHDSDVFSVLARPTDPQVITGSHDSTIK 320
Query: 323 XXXXXXGQKIREIQTDSSDMWKIVFSPDGSQVATGGHTGKVTVYGIINGT-VDKVLDTRG 499
G+ + I + + P + + + + + G +L +
Sbjct: 321 FWDLRYGKSMATITNHKKTVRAMALHPKENDFVSAS-ADNIKKFSLPKGEFCHNMLSLQR 379
Query: 500 KFIMSVAWSPDGRYIASGAEGGSVYLFDVSQGKMLHTIEAHAQ 628
I +VA + DG + G +GG ++ +D G E Q
Sbjct: 380 DIINAVAVNEDGVMVTGGDKGG-LWFWDWKSGHNFQRAETIVQ 421
>At2g43770.1 68415.m05441 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to U5 snRNP-specific 40 kDa protein (GI:3820594)
[Homo sapiens]
Length = 343
Score = 44.4 bits (100), Expect = 6e-05
Identities = 22/44 (50%), Positives = 29/44 (65%)
Frame = +2
Query: 152 DYIVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDG 283
D I TGG+DN VKVW + K E TLEGH+ + +++SPDG
Sbjct: 193 DKIFTGGVDNDVKVW--DLRKGEATMTLEGHQDTITGMSLSPDG 234
Score = 41.1 bits (92), Expect = 6e-04
Identities = 22/88 (25%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Frame = +2
Query: 374 SDMWKIVFSPDGSQVATGGHTGKVTVYGIINGTVD-KVLDTRGKFIMSVAWSPDGRYIAS 550
S ++ + F+P G+ +A+G H ++ ++ + + VL I+ + W+ DG I S
Sbjct: 54 SAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWTSDGSQIVS 113
Query: 551 GAEGGSVYLFDVSQGKMLHTIEAHAQAV 634
+ +V +DV GK + + H+ V
Sbjct: 114 ASPDKTVRAWDVETGKQIKKMAEHSSFV 141
Score = 39.9 bits (89), Expect = 0.001
Identities = 34/168 (20%), Positives = 67/168 (39%), Gaps = 9/168 (5%)
Frame = +2
Query: 158 IVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETIAXXXXXXXXXXXXXX 337
I++G D K+W + T + + +V+ S + I
Sbjct: 154 IISGSDDGTAKLWDMRQRGA--IQTFPD-KYQITAVSFSDAADKIFTGGVDNDVKVWDLR 210
Query: 338 XGQKIREIQTDSSDMWKIVFSPDGSQVATGGHTGKVTV-----YGIINGTVDKVLDTRG- 499
G+ ++ + + SPDGS + T G K+ V Y N V K+ +
Sbjct: 211 KGEATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCV-KIFEGHQH 269
Query: 500 ---KFIMSVAWSPDGRYIASGAEGGSVYLFDVSQGKMLHTIEAHAQAV 634
K ++ +WSPDG + +G+ V+++D + + ++ + H +V
Sbjct: 270 NFEKNLLKCSWSPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSV 317
Score = 27.5 bits (58), Expect = 7.9
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 6/59 (10%)
Frame = +2
Query: 134 SKGPSKDYIVTGGLDNLVKVWSYE--NNKLELLHTLEGH----EMPVVSVAVSPDGETI 292
S P Y++T G+DN + VW + + EGH E ++ + SPDG +
Sbjct: 229 SLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKV 287
>At5g50230.1 68418.m06221 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to TIPD PROTEIN (SP:O15736)[Dictyostelium
discoideum]
Length = 515
Score = 44.0 bits (99), Expect = 9e-05
Identities = 39/162 (24%), Positives = 74/162 (45%), Gaps = 3/162 (1%)
Frame = +2
Query: 158 IVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETIAXXXXXXXXXXXXXX 337
+ TGG D VK+W + N L+ +L G ++ +AV+ D +++
Sbjct: 246 LFTGGQDRAVKMW--DTNSGTLIKSLYGSLGNILDMAVTHDNKSVIAATSSNNLFVWDVS 303
Query: 338 XGQKIREIQTDSSD-MWKIVFSPDGSQ-VATGGHTGKVTVYGIING-TVDKVLDTRGKFI 508
G ++R T +D + + S S+ V + + + ++ + G + VL T
Sbjct: 304 SG-RVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLWDLHKGYCTNTVLFTSN--C 360
Query: 509 MSVAWSPDGRYIASGAEGGSVYLFDVSQGKMLHTIEAHAQAV 634
++ S DG + SG G++ L+D+ GK+L + H+ AV
Sbjct: 361 NAICLSIDGLTVFSGHMDGNLRLWDIQTGKLLSEVAGHSSAV 402
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/82 (26%), Positives = 42/82 (51%)
Frame = +2
Query: 389 IVFSPDGSQVATGGHTGKVTVYGIINGTVDKVLDTRGKFIMSVAWSPDGRYIASGAEGGS 568
IVF + + TGG V ++ +GT+ K L I+ +A + D + + + +
Sbjct: 237 IVFEYNSGTLFTGGQDRAVKMWDTNSGTLIKSLYGSLGNILDMAVTHDNKSVIAATSSNN 296
Query: 569 VYLFDVSQGKMLHTIEAHAQAV 634
++++DVS G++ HT+ H V
Sbjct: 297 LFVWDVSSGRVRHTLTGHTDKV 318
Score = 42.3 bits (95), Expect = 3e-04
Identities = 33/168 (19%), Positives = 68/168 (40%), Gaps = 5/168 (2%)
Frame = +2
Query: 146 SKDYIVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETIAXXXXXXXXXX 325
S ++V+ D +K+W + ++ +S DG T+
Sbjct: 327 SSRHVVSAAYDRTIKLWDLHKGYCTNTVLFTSN---CNAICLSIDGLTVFSGHMDGNLRL 383
Query: 326 XXXXXGQKIREIQTDSSDMWKIVFSPDGSQVATGGHTGKVTVYGIINGTVDKVLDTRGKF 505
G+ + E+ SS + + S +G+++ T G V+ + L G
Sbjct: 384 WDIQTGKLLSEVAGHSSAVTSVSLSRNGNRILTSGRDNVHNVFDTRTLEICGTLRASGNR 443
Query: 506 IMSVAWS-----PDGRYIASGAEGGSVYLFDVSQGKMLHTIEAHAQAV 634
+ S WS PD Y+A+G+ GSV+++ +S+G ++ ++ +
Sbjct: 444 LAS-NWSRSCISPDDDYVAAGSADGSVHVWSLSKGNIVSILKEQTSPI 490
Score = 29.9 bits (64), Expect = 1.5
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +2
Query: 119 NHSTDSKGPSKDYIVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETIA 295
N S P DY+ G D V VWS +K ++ L+ P++ + S G+ +A
Sbjct: 447 NWSRSCISPDDDYVAAGSADGSVHVWSL--SKGNIVSILKEQTSPILCCSWSGIGKPLA 503
>At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota,PID:g2253631
Length = 457
Score = 42.7 bits (96), Expect = 2e-04
Identities = 35/163 (21%), Positives = 68/163 (41%), Gaps = 8/163 (4%)
Frame = +2
Query: 173 LDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETIAXXXXXXXXXXXXXXXGQKI 352
LD+ V +W L T++ + PV S+ +PDG +A +++
Sbjct: 158 LDHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSASNRQL 217
Query: 353 REIQ-TDSSDMWKIVFSPDGSQVATGGHTGKVTVYGI-INGTVDKVLDTRGKFIMSVAWS 526
R ++ S + + + + + TGG G + + I + + + + + WS
Sbjct: 218 RTLKGGHQSRVGSLAW--NNHILTTGGMDGLIINNDVRIRSPIVETYRGHTQEVCGLKWS 275
Query: 527 PDGRYIASGAEGGSVYLFDVSQG------KMLHTIEAHAQAVR 637
G+ +ASG V+++D S + LH +E H AV+
Sbjct: 276 GSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVK 318
Score = 29.9 bits (64), Expect = 1.5
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Frame = +2
Query: 146 SKDYIVTGGLDNLVKVW----SYENNKLELLHTLEGHEMPVVSVAVSP 277
S + +GG DN+V +W + N+ + LH LE H V ++A P
Sbjct: 277 SGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAWCP 324
Score = 27.9 bits (59), Expect = 6.0
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +2
Query: 167 GGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETIA 295
G N + +W Y + + + L GH V+ +A SPDG T+A
Sbjct: 378 GFTQNQLTLWKYPS--MVKMAELTGHTSRVLYMAQSPDGCTVA 418
>At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota, PID:g2253631
Length = 447
Score = 42.7 bits (96), Expect = 2e-04
Identities = 35/163 (21%), Positives = 68/163 (41%), Gaps = 8/163 (4%)
Frame = +2
Query: 173 LDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETIAXXXXXXXXXXXXXXXGQKI 352
LD+ V +W L T++ + PV S+ +PDG +A +++
Sbjct: 148 LDHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSASNRQL 207
Query: 353 REIQ-TDSSDMWKIVFSPDGSQVATGGHTGKVTVYGI-INGTVDKVLDTRGKFIMSVAWS 526
R ++ S + + + + + TGG G + + I + + + + + WS
Sbjct: 208 RTLKGGHQSRVGSLAW--NNHILTTGGMDGLIINNDVRIRSPIVETYRGHTQEVCGLKWS 265
Query: 527 PDGRYIASGAEGGSVYLFDVSQG------KMLHTIEAHAQAVR 637
G+ +ASG V+++D S + LH +E H AV+
Sbjct: 266 GSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVK 308
Score = 29.9 bits (64), Expect = 1.5
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Frame = +2
Query: 146 SKDYIVTGGLDNLVKVW----SYENNKLELLHTLEGHEMPVVSVAVSP 277
S + +GG DN+V +W + N+ + LH LE H V ++A P
Sbjct: 267 SGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAWCP 314
Score = 27.9 bits (59), Expect = 6.0
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +2
Query: 167 GGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETIA 295
G N + +W Y + + + L GH V+ +A SPDG T+A
Sbjct: 368 GFTQNQLTLWKYPS--MVKMAELTGHTSRVLYMAQSPDGCTVA 408
>At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies, 1
significant); similar to Trp-Asp repeat protein
(PIR:T40094) [Schizosaccharomyces]
Length = 447
Score = 42.3 bits (95), Expect = 3e-04
Identities = 29/116 (25%), Positives = 49/116 (42%), Gaps = 1/116 (0%)
Frame = +2
Query: 251 PVVSVAVSPDGETIAXXXXXXXXXXXXXXXGQKIREIQTDSSDMWKIVFSPDGSQVATGG 430
PV ++SPDG+ +A G+ + + + + PDG +TG
Sbjct: 279 PVNHASLSPDGKLLAIVGDNPEGLIVDPNTGKTLETLSGHLDFSFASAWHPDGVTFSTGN 338
Query: 431 HTGKVTVYGIINGTVD-KVLDTRGKFIMSVAWSPDGRYIASGAEGGSVYLFDVSQG 595
V+ I N + VL I S+ ++ DG+Y+A V+++DVS G
Sbjct: 339 QDKTCRVWDIRNLSQSVTVLKGNLGAIRSIRYTSDGKYMAMAEPADFVHVYDVSNG 394
>At2g22040.1 68415.m02617 transducin family protein / WD-40 repeat
family protein similar to Pop3 (GI:3434986)
[Schizosaccharomyces pombe]; contains Pfam PF00400: WD
domain, G-beta repeat (6 copies, 2 weak);
Length = 312
Score = 42.3 bits (95), Expect = 3e-04
Identities = 21/96 (21%), Positives = 46/96 (47%)
Frame = +2
Query: 344 QKIREIQTDSSDMWKIVFSPDGSQVATGGHTGKVTVYGIINGTVDKVLDTRGKFIMSVAW 523
+ + ++Q +S + K + SP +AT V ++ + ++KVL +++ +
Sbjct: 208 EPLHKLQAHNSHILKCLLSPGNKYLATASSDKTVKIWNLDGFKLEKVLTGHERWVWDCDF 267
Query: 524 SPDGRYIASGAEGGSVYLFDVSQGKMLHTIEAHAQA 631
S DG Y+ + + + L+ + GK +AH +A
Sbjct: 268 SMDGEYLVTASSDTTARLWSMRAGKEEMVYQAHRKA 303
Score = 35.5 bits (78), Expect = 0.030
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = +2
Query: 143 PSKDYIVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGE 286
P Y+ T D VK+W+ + KLE L GHE V S DGE
Sbjct: 227 PGNKYLATASSDKTVKIWNLDGFKLE--KVLTGHERWVWDCDFSMDGE 272
>At5g64630.3 68418.m08123 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 428
Score = 41.9 bits (94), Expect = 3e-04
Identities = 18/55 (32%), Positives = 31/55 (56%)
Frame = +2
Query: 473 VDKVLDTRGKFIMSVAWSPDGRYIASGAEGGSVYLFDVSQGKMLHTIEAHAQAVR 637
V K L K ++ + WSPD Y+ SG+ S ++DV++G + ++AH V+
Sbjct: 45 VHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQ 99
Score = 41.9 bits (94), Expect = 3e-04
Identities = 16/58 (27%), Positives = 32/58 (55%)
Frame = +2
Query: 377 DMWKIVFSPDGSQVATGGHTGKVTVYGIINGTVDKVLDTRGKFIMSVAWSPDGRYIAS 550
D+ + +SPD + + +G ++ + G+V ++LD ++ VAW P +Y+AS
Sbjct: 55 DVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLAKYVAS 112
>At5g27945.1 68418.m03364 transducin family protein / WD-40 repeat
family protein fizzy-related (FZR); contains 6 WD-40
repeats (PF00400); WD-repeat protein,
carrot,(gi:2253631) PIR:T14352
Length = 428
Score = 41.9 bits (94), Expect = 3e-04
Identities = 38/171 (22%), Positives = 70/171 (40%), Gaps = 8/171 (4%)
Frame = +2
Query: 149 KDYIVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETIAXXXXXXXXXXX 328
++YIV L + V +W + L T++ PV S+ + DG +A
Sbjct: 120 EEYIVIEQLGDTVYLWDASSCYTSKLVTIDDENGPVTSINWTQDGLDLAVGLDNSEVQVW 179
Query: 329 XXXXGQKIREIQ-TDSSDMWKIVFSPDGSQVATGGHTGKVTVYGI-INGTVDKVLDTRGK 502
+ +R ++ S + + + + + TGG GK+ + I ++ +
Sbjct: 180 DCVSNRHVRTLRGGHESRVGSLAW--NNHILTTGGMDGKIVNNDVRIRSSIIGTYVGHTE 237
Query: 503 FIMSVAWSPDGRYIASGAEGGSVYLFDVSQG------KMLHTIEAHAQAVR 637
+ + WS G+ +ASG V+++D S + LH E H AVR
Sbjct: 238 EVCGLKWSESGKKLASGGNDNVVHIWDRSLASSNPTRQWLHRFEEHTAAVR 288
Score = 28.3 bits (60), Expect = 4.5
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +2
Query: 167 GGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETIA 295
G N + +W Y + + + L GH V+ +A SPDG T+A
Sbjct: 348 GFTQNQLTLWKYPS--MVKMAELNGHTSRVLFMAQSPDGCTVA 388
>At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 447
Score = 41.9 bits (94), Expect = 3e-04
Identities = 34/147 (23%), Positives = 63/147 (42%), Gaps = 1/147 (0%)
Frame = +2
Query: 158 IVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETIAXXXXXXXXXXXXXX 337
++T D V+++ N LL+ H V +++ SPDG+ +A
Sbjct: 251 VMTANNDCTVRLFDATN--FALLNRFAFH-WSVNNISTSPDGKLVAVLGDSPECLLADTG 307
Query: 338 XGQKIREIQTDSSDMWKIVFSPDGSQVATGGHTGKVTVYGIINGTVD-KVLDTRGKFIMS 514
G+ I ++ + + P+G +ATG ++ + N + KVL I +
Sbjct: 308 SGKVIHGLEGHLDYSFSSAWHPNGQILATGNQDTTCRLWDVRNLSQSLKVLKGNMGAIRA 367
Query: 515 VAWSPDGRYIASGAEGGSVYLFDVSQG 595
+ ++ DGR++A V+LFD G
Sbjct: 368 LRFTSDGRFLAMAEPADFVHLFDTEAG 394
Score = 36.7 bits (81), Expect = 0.013
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +2
Query: 398 SPDGSQVATGGHTGKVTVYGIINGTVDKVLDTRGKFIMSVAWSPDGRYIASGAEGGSVYL 577
SPDG VA G + + + +G V L+ + S AW P+G+ +A+G + + L
Sbjct: 286 SPDGKLVAVLGDSPECLLADTGSGKVIHGLEGHLDYSFSSAWHPNGQILATGNQDTTCRL 345
Query: 578 FDV-SQGKMLHTIEAHAQAVR 637
+DV + + L ++ + A+R
Sbjct: 346 WDVRNLSQSLKVLKGNMGAIR 366
Score = 33.1 bits (72), Expect = 0.16
Identities = 22/93 (23%), Positives = 41/93 (44%), Gaps = 1/93 (1%)
Frame = +2
Query: 347 KIREIQTDSSDMWKIVFSPDGS-QVATGGHTGKVTVYGIINGTVDKVLDTRGKFIMSVAW 523
K+ D ++ I +P GS +V T + V ++ N + + +++
Sbjct: 227 KLTSADNDITNSVDIYNAPSGSLRVMTANNDCTVRLFDATNFALLNRFAFHWS-VNNIST 285
Query: 524 SPDGRYIASGAEGGSVYLFDVSQGKMLHTIEAH 622
SPDG+ +A + L D GK++H +E H
Sbjct: 286 SPDGKLVAVLGDSPECLLADTGSGKVIHGLEGH 318
>At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic
regulator 1 (PRL1) identical to PP1/PP2A phosphatases
pleiotropic regulator PRL1 (SP:Q42384) [Arabidopsis
thaliana], PRL1 [Arabidopsis thaliana] GI:577733;
contains Pfam PF00400: WD domain, G-beta repeat (7
copies)
Length = 486
Score = 41.5 bits (93), Expect = 5e-04
Identities = 31/160 (19%), Positives = 59/160 (36%)
Frame = +2
Query: 155 YIVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETIAXXXXXXXXXXXXX 334
Y+ + G D VK W E NK ++ + GH V +A+ P + +
Sbjct: 232 YMFSAGDDKQVKCWDLEQNK--VIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDI 289
Query: 335 XXGQKIREIQTDSSDMWKIVFSPDGSQVATGGHTGKVTVYGIINGTVDKVLDTRGKFIMS 514
+I + + + + P QV TG H + + + G L K + +
Sbjct: 290 RTKMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKKSVRA 349
Query: 515 VAWSPDGRYIASGAEGGSVYLFDVSQGKMLHTIEAHAQAV 634
+ P AS A + F + +G+ H + + + +
Sbjct: 350 MTLHPKENAFAS-ASADNTKKFSLPKGEFCHNMLSQQKTI 388
Score = 39.5 bits (88), Expect = 0.002
Identities = 32/163 (19%), Positives = 63/163 (38%), Gaps = 1/163 (0%)
Frame = +2
Query: 143 PSKDYIVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETIAXXXXXXXXX 322
P+ D ++TGG D++ +VW K+++ L GH+ V SV P +
Sbjct: 270 PTLDVLLTGGRDSVCRVWDI-RTKMQIF-ALSGHDNTVCSVFTRPTDPQVVTGSHDTTIK 327
Query: 323 XXXXXXGQKIREIQTDSSDMWKIVFSPDGSQVATGGHTGKVTVYGIINGT-VDKVLDTRG 499
G+ + + + + P + A+ + + G +L +
Sbjct: 328 FWDLRYGKTMSTLTHHKKSVRAMTLHPKENAFASAS-ADNTKKFSLPKGEFCHNMLSQQK 386
Query: 500 KFIMSVAWSPDGRYIASGAEGGSVYLFDVSQGKMLHTIEAHAQ 628
I ++A + DG + +G + GS++ +D G E Q
Sbjct: 387 TIINAMAVNEDG-VMVTGGDNGSIWFWDWKSGHSFQQSETIVQ 428
>At1g73720.1 68414.m08536 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Will die slowly protein
(SP:Q9V3J8)[Drosophila melanogaster]
Length = 511
Score = 41.5 bits (93), Expect = 5e-04
Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Frame = +2
Query: 395 FSPDGSQVATGGHTGKVTVYGIINGTVDKVLDTRG--KFIMS------VAWSPDGRYIAS 550
FSPDG +A+ G + V+ I+G + K L + F+M + +S D +AS
Sbjct: 221 FSPDGQFLASSSVDGFIEVWDYISGKLKKDLQYQADESFMMHDDPVLCIDFSRDSEMLAS 280
Query: 551 GAEGGSVYLFDVSQGKMLHTIEAHAQAV 634
G++ G + ++ + G + +AH+Q V
Sbjct: 281 GSQDGKIKIWRIRTGVCIRRFDAHSQGV 308
>At5g43920.1 68418.m05372 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 523
Score = 41.1 bits (92), Expect = 6e-04
Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +2
Query: 146 SKDYIVTGGLDNLVKVWSY-ENNKLELLHTLEGHEMPVVSVAVSPD 280
S Y+ T D +W ++NK+EL HTLE H+ PV V+ SPD
Sbjct: 235 SGKYLATASSDCTAIIWKVLDDNKVELKHTLESHQNPVSFVSWSPD 280
Score = 36.7 bits (81), Expect = 0.013
Identities = 36/172 (20%), Positives = 72/172 (41%), Gaps = 8/172 (4%)
Frame = +2
Query: 143 PSKDYIVTGGLD--NLVKVWSYENNKLELLHTLEGHEMP-VVSVAVSPDGETIAXXXXXX 313
P +V G D + +W + N+++ G +P VV +AV+PDGE++
Sbjct: 323 PDSTRLVCGSSDPERGIVMWDTDGNEIK---AWRGTRIPKVVDLAVTPDGESMITVFSDK 379
Query: 314 XXXXXXXXXGQKIREIQTDSSDMWKIVFSPDGSQVATGGHTGKVTVYGIINGTVDKVLDT 493
K+ + ++ + + S DG ++ ++ + G + L
Sbjct: 380 EIRILNLET--KVERVISEEQPITSLSISGDGKFFIVNLSCQEIHLWDLA-GEWKQPLKF 436
Query: 494 RG----KFIMSVAWSP-DGRYIASGAEGGSVYLFDVSQGKMLHTIEAHAQAV 634
G K+++ + D +IASG+E VY++++ K L + H+ V
Sbjct: 437 SGHRQSKYVIRSCFGGLDSSFIASGSEDSQVYIWNLKNTKPLEVLSGHSMTV 488
Score = 35.1 bits (77), Expect = 0.040
Identities = 18/92 (19%), Positives = 42/92 (45%), Gaps = 3/92 (3%)
Frame = +2
Query: 344 QKIREIQTDSSDMWKIVFSPDGSQVATGGHTGKVTVYGIINGT---VDKVLDTRGKFIMS 514
+ ++ + +++W + FS G +AT ++ +++ + L++ +
Sbjct: 215 ETVQILVAHKNEVWFVQFSNSGKYLATASSDCTAIIWKVLDDNKVELKHTLESHQNPVSF 274
Query: 515 VAWSPDGRYIASGAEGGSVYLFDVSQGKMLHT 610
V+WSPD + + + L+DV G + HT
Sbjct: 275 VSWSPDDTKLLTCGNAEVLKLWDVDTGVLRHT 306
>At3g18140.1 68416.m02306 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Pop3 (GP:3434986) [Schizosaccharomyces pombe]
Length = 305
Score = 41.1 bits (92), Expect = 6e-04
Identities = 29/170 (17%), Positives = 69/170 (40%), Gaps = 7/170 (4%)
Frame = +2
Query: 143 PSKDYIVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETIAXXXXXXXXX 322
P++ +++G + ++VW N + + V S+ V DG +
Sbjct: 129 PNQTELISGDQNGNIRVWDLRANSCSC-ELVPEVDTAVRSLTVMWDGTMVVAANNRGTCY 187
Query: 323 XXXXXXGQK-------IREIQTDSSDMWKIVFSPDGSQVATGGHTGKVTVYGIINGTVDK 481
G++ + ++Q + + K + SP +AT V ++ + ++K
Sbjct: 188 VWRLLRGKQTMTEFEPLHKLQAHNGHILKCLLSPANKYLATASSDKTVKIWNVDGFKLEK 247
Query: 482 VLDTRGKFIMSVAWSPDGRYIASGAEGGSVYLFDVSQGKMLHTIEAHAQA 631
VL +++ +S DG ++ + + + L+ + GK + + H +A
Sbjct: 248 VLTGHQRWVWDCVFSVDGEFLVTASSDMTARLWSMPAGKEVKVYQGHHKA 297
>At2g05720.1 68415.m00613 transducin family protein / WD-40 repeat
family protein Similar to U4/U6 small nuclear
ribonucleoprotein hPrp4 (gi:2708305)[Homo sapiens];
contains 4 WD-40 repeats
Length = 276
Score = 41.1 bits (92), Expect = 6e-04
Identities = 25/96 (26%), Positives = 47/96 (48%), Gaps = 4/96 (4%)
Frame = +2
Query: 359 IQTDSSDMWKIVFSPDGSQV----ATGGHTGKVTVYGIINGTVDKVLDTRGKFIMSVAWS 526
+ T S+D + ++ DG+ + A+ G V+ + + K ++SV +S
Sbjct: 122 LATASTDRTEKIWKTDGTLLQTFKASSGFDSLARVWDLRTARNILIFQGHIKQVLSVDFS 181
Query: 527 PDGRYIASGAEGGSVYLFDVSQGKMLHTIEAHAQAV 634
P+G ++ASG E ++D+ K+L+ I AH V
Sbjct: 182 PNGYHLASGGEDNQCRIWDLRMRKLLYIIPAHVNLV 217
Score = 29.1 bits (62), Expect(2) = 0.003
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +2
Query: 164 TGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETIA 295
+ G D+L +VW + L+ +GH V+SV SP+G +A
Sbjct: 147 SSGFDSLARVWDLRTARNILI--FQGHIKQVLSVDFSPNGYHLA 188
Score = 28.7 bits (61), Expect(2) = 0.003
Identities = 15/81 (18%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = +2
Query: 395 FSPDGSQVATGGHTGKVTVYGIINGTVDKVLDTRGKFIMSVAWSPDGRY-IASGAEGGSV 571
FSP+G +A+GG + ++ + + ++ + V + P RY +A+ + +V
Sbjct: 180 FSPNGYHLASGGEDNQCRIWDLRMRKLLYIIPAHVNLVSQVKYEPQERYFLATASHDMNV 239
Query: 572 YLFDVSQGKMLHTIEAHAQAV 634
++ ++ ++ H V
Sbjct: 240 NIWSGRDFSLVKSLVGHESKV 260
>At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 (1
significant) WD-40 repeats (PF0400); similar to Trp-Asp
repeat protein (PIR:T40094) [Schizosaccharomyces]
Length = 445
Score = 41.1 bits (92), Expect = 6e-04
Identities = 29/117 (24%), Positives = 49/117 (41%), Gaps = 2/117 (1%)
Frame = +2
Query: 251 PVVSVAVSPDGETIAXXXXXXXXXXXXXXXGQKIREIQTDSSDMWKIVFSPDGSQVATGG 430
PV ++SPDG+ + G+ + + + + PDG +TG
Sbjct: 277 PVNHTSLSPDGKLLTIVGDNPESLLVDPNTGKTLATLSGHLDFSFASAWHPDGFTFSTGN 336
Query: 431 HTGKVTVYGIINGTVDKVLDTRGKF--IMSVAWSPDGRYIASGAEGGSVYLFDVSQG 595
V+ I N + V RG I S+ ++ DG+Y+A V+++DVS G
Sbjct: 337 QDKTCRVWDIRNLS-KSVAVLRGNLGAIRSIRYTSDGKYMAMAEPADFVHVYDVSNG 392
>At2g47410.1 68415.m05917 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to WDR protein, form B (GI:14970593) [Mus
musculus]
Length = 1589
Score = 40.7 bits (91), Expect = 8e-04
Identities = 25/88 (28%), Positives = 38/88 (43%)
Frame = +2
Query: 155 YIVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETIAXXXXXXXXXXXXX 334
Y++TG D LVK+WS E L + GHE + +AVS + +A
Sbjct: 319 YVITGSDDRLVKIWSMET--ALCLASCRGHEGDITDLAVSSNNALVASASNDFVIRVWRL 376
Query: 335 XXGQKIREIQTDSSDMWKIVFSPDGSQV 418
G I ++ + + I FSP + V
Sbjct: 377 PDGMPISVLRGHTGAVTAIAFSPRQASV 404
>At4g29860.1 68417.m04250 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400); WDVCF
variant 1 (gi:12006981) [Mus musculus]
Length = 386
Score = 40.3 bits (90), Expect = 0.001
Identities = 37/146 (25%), Positives = 61/146 (41%), Gaps = 4/146 (2%)
Frame = +2
Query: 155 YIVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAV--SPDGETIAXXXXXXXXXXX 328
+++ G D + +W N K+ L +++ H PV+S++V S DG
Sbjct: 233 HVLAGYEDGSILLWDIRNAKIPLT-SVKFHSEPVLSLSVASSCDGGISGGADDKIVMYNL 291
Query: 329 XXXXGQ-KIR-EIQTDSSDMWKIVFSPDGSQVATGGHTGKVTVYGIINGTVDKVLDTRGK 502
G IR EI + + DG AT G ++ VY G +L
Sbjct: 292 NHSTGSCTIRKEITLERPGVSGTSIRVDGKIAATAGWDHRIRVYNYRKGNALAILKYHRA 351
Query: 503 FIMSVAWSPDGRYIASGAEGGSVYLF 580
+V++SPD +AS +E +V L+
Sbjct: 352 TCNAVSYSPDCELMASASEDATVALW 377
>At2g26060.1 68415.m03129 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD40-repeat containing protein Ciao 1
(SP:O76071) [Homo sapiens]
Length = 352
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/75 (29%), Positives = 32/75 (42%)
Frame = +2
Query: 71 ENAHEDLIYGCAWANINHSTDSKGPSKDYIVTGGLDNLVKVWSYENNKLELLHTLEGHEM 250
E H + CAW+ PS + T D +W ++ E + TLEGHE
Sbjct: 70 EETHTRTVRSCAWS----------PSGQLLATASFDGTTGIWKNYGSEFECISTLEGHEN 119
Query: 251 PVVSVAVSPDGETIA 295
V SV+ + G +A
Sbjct: 120 EVKSVSWNASGSCLA 134
Score = 35.1 bits (77), Expect = 0.040
Identities = 33/176 (18%), Positives = 69/176 (39%), Gaps = 8/176 (4%)
Frame = +2
Query: 26 LKMPSNTIHSILLKKENAHEDLIYGCAWANINHSTDSKGPSKDYIVTGGLDNLVKVWSYE 205
+ + + + ++K H D ++ AW ++ D P + + DN V++W
Sbjct: 1 MDLMEKNLELVEIQKLEGHTDRVWSVAWNPVSSHADGVSP---ILASCSGDNTVRIWEQS 57
Query: 206 N-NKLELLHTL--EGHEMPVVSVAVSPDGETIAXXXXXXXXXXXXXXXG--QKIREIQTD 370
+ ++ T+ E H V S A SP G+ +A + I ++
Sbjct: 58 SLSRSWTCKTVLEETHTRTVRSCAWSPSGQLLATASFDGTTGIWKNYGSEFECISTLEGH 117
Query: 371 SSDMWKIVFSPDGSQVATGGHTGKVTVYGIINGT---VDKVLDTRGKFIMSVAWSP 529
+++ + ++ GS +AT V ++ ++ G VL + + V W P
Sbjct: 118 ENEVKSVSWNASGSCLATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWHP 173
Score = 29.9 bits (64), Expect = 1.5
Identities = 14/52 (26%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = +2
Query: 488 DTRGKFIMSVAWSPDGRYIASGAEGGSVYLFD--VSQGKMLHTIEAHAQAVR 637
+T + + S AWSP G+ +A+ + G+ ++ S+ + + T+E H V+
Sbjct: 71 ETHTRTVRSCAWSPSGQLLATASFDGTTGIWKNYGSEFECISTLEGHENEVK 122
>At5g49430.1 68418.m06116 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 9
(SP:Q9NSI6) {Homo sapiens}; contains Pfam PF00400: WD
domain, G-beta repeat (4 copies)
Length = 1677
Score = 39.9 bits (89), Expect = 0.001
Identities = 36/135 (26%), Positives = 57/135 (42%), Gaps = 1/135 (0%)
Frame = +2
Query: 2 SLRAI*TYLKMPSNTIHSIL-LKKENAHEDLIYGCAWANINHSTDSKGPSKDYIVTGGLD 178
S+RA + PS+ + + +K+ H + +Y CA D G Y++TG D
Sbjct: 217 SIRAACYVIAKPSSMVQKMQNIKRLRGHRNAVY-CA------ILDRSGR---YVITGSDD 266
Query: 179 NLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETIAXXXXXXXXXXXXXXXGQKIRE 358
LVKVWS + L + GHE + +AVS + IA G +
Sbjct: 267 RLVKVWSMDT--AYCLASCRGHEGDITDLAVSSNNIFIASASNDCVIRVWRLPDGLPVSV 324
Query: 359 IQTDSSDMWKIVFSP 403
++ + + I FSP
Sbjct: 325 LRGHTGAVTAIAFSP 339
>At3g53390.1 68416.m05892 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 558
Score = 39.9 bits (89), Expect = 0.001
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Frame = +2
Query: 389 IVFSPDGSQVATGGHTGKVTVYGIINGTVDKVLDTRGKF--IMSVAWSPDGRYIASGAEG 562
I FS DG+ +AT G G + ++ + T V + + ++ +WS DG+YI +G E
Sbjct: 309 IAFSNDGAHLATVGRDGYLRIFDFL--TQKLVCGGKSYYGALLCCSWSMDGKYILTGGED 366
Query: 563 GSVYLFDVSQGKMLHTIEAH 622
V ++ + K++ E H
Sbjct: 367 DLVQVWSMEDRKVVAWGEGH 386
Score = 34.7 bits (76), Expect = 0.052
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = +2
Query: 155 YIVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVA 268
YI+TGG D+LV+VWS E+ K ++ EGH V VA
Sbjct: 359 YILTGGEDDLVQVWSMEDRK--VVAWGEGHNSWVSGVA 394
>At2g37160.1 68415.m04559 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 544
Score = 39.9 bits (89), Expect = 0.001
Identities = 21/78 (26%), Positives = 39/78 (50%)
Frame = +2
Query: 389 IVFSPDGSQVATGGHTGKVTVYGIINGTVDKVLDTRGKFIMSVAWSPDGRYIASGAEGGS 568
I FS DG+ +AT G G + ++ + + + ++ AWS DG+Y+ +G E
Sbjct: 309 IAFSNDGAYLATVGRDGYLRIFDFSTQKLVCGVKSYYGALLCCAWSMDGKYLLTGGEDDL 368
Query: 569 VYLFDVSQGKMLHTIEAH 622
V ++ + K++ E H
Sbjct: 369 VQVWSMEDRKVVAWGEGH 386
Score = 33.9 bits (74), Expect = 0.092
Identities = 18/38 (47%), Positives = 25/38 (65%)
Frame = +2
Query: 155 YIVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVA 268
Y++TGG D+LV+VWS E+ K ++ EGH V VA
Sbjct: 359 YLLTGGEDDLVQVWSMEDRK--VVAWGEGHNSWVSGVA 394
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/43 (32%), Positives = 27/43 (62%)
Frame = +2
Query: 506 IMSVAWSPDGRYIASGAEGGSVYLFDVSQGKMLHTIEAHAQAV 634
I S+A+S DG Y+A+ G + +FD S K++ ++++ A+
Sbjct: 306 INSIAFSNDGAYLATVGRDGYLRIFDFSTQKLVCGVKSYYGAL 348
>At1g24130.1 68414.m03044 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats
(PF00400);similar to beta transducin-like protein
HET-D2Y (GI:17225210) [Podospora anserina].
Length = 415
Score = 39.9 bits (89), Expect = 0.001
Identities = 19/50 (38%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Frame = +2
Query: 146 SKD-YIVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETI 292
SKD ++ TG D +KVW+ ++ K L+ TL H V ++A+S DG+ +
Sbjct: 244 SKDGFVYTGSADKKIKVWNKKDKKHSLVATLTKHLSAVNALAISEDGKVL 293
Score = 32.7 bits (71), Expect = 0.21
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = +2
Query: 146 SKDYIVTGGLDNLVKVWS---YENNKLELLHTLEGHEMPVVSVAVS 274
+ D +++G D ++VW E L LEGH PV S+AVS
Sbjct: 337 ASDLVLSGSADKSLRVWRRGLMEKEGYSCLAVLEGHTKPVKSLAVS 382
>At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2
WD-40 repeats (PF0400);similar to guanine
nucleotide-binding protein beta subunit GPBA (SP:P36408)
[Dictyostelium discoideum (Slime mold)]; similar to
katanin p80 (WD40-containing) subunit B 1 (GI:12655011)
[Homo sapiens]
Length = 418
Score = 39.5 bits (88), Expect = 0.002
Identities = 27/115 (23%), Positives = 49/115 (42%), Gaps = 1/115 (0%)
Frame = +2
Query: 254 VVSVAVSPDGETIAXXXXXXXXXXXXXXXGQKIREIQTDSSDMWKIVFSPDGSQVATGGH 433
V + +VSPDG+ +A G+ I ++ + + P+G +ATG
Sbjct: 251 VNNTSVSPDGKLLAVVGDSTECLISDSHSGKVISSLRGHKDYSFASAWHPNGLILATGNQ 310
Query: 434 TGKVTVYGIINGTVD-KVLDTRGKFIMSVAWSPDGRYIASGAEGGSVYLFDVSQG 595
++ I N + VL I + ++P+GR++A V++FD G
Sbjct: 311 DTACRLWDIRNPSESFAVLKGNMGAIRGLKFTPEGRFLAMAEPADFVHIFDTQSG 365
>At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; similar to "Will die slowly" protein,
Drosophia; putative cdc20 protein - Arabidopsis
thaliana, EMBL:AF029262
Length = 411
Score = 39.1 bits (87), Expect = 0.002
Identities = 36/164 (21%), Positives = 69/164 (42%), Gaps = 9/164 (5%)
Frame = +2
Query: 173 LDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETIAXXXXXXXXXXXXXXXGQKI 352
L + V +W + L T++ E PV S+ + DG +A +++
Sbjct: 110 LGDTVYLWDASSGSTYKLVTIDEEEGPVTSINWTQDGLDLAIGLDNSEVQLWDCVSNRQV 169
Query: 353 REIQTD-SSDMWKIVFSPDGSQVATGGHTGKVTVYGI-INGTVDKVLDTRGKFIMSVAWS 526
R ++ S + + ++ + TGG GK+ + I ++ + + + + WS
Sbjct: 170 RTLRGGHESRVGSLAWN--NHILTTGGMDGKIVNNDVRIRSSIVETYLGHTEEVCGLKWS 227
Query: 527 PDGRYIASGAEGGSVYLFD---VSQG----KMLHTIEAHAQAVR 637
G+ +ASG V+++D V+ + LH E H AVR
Sbjct: 228 ESGKKLASGGNDNVVHIWDHRSVASSNPTRQWLHRFEEHTAAVR 271
Score = 28.3 bits (60), Expect = 4.5
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +2
Query: 167 GGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETIA 295
G N + +W Y + + + L GH V+ +A SPDG T+A
Sbjct: 331 GFTQNQLTLWKYPS--MVKMAELNGHTSRVLFMAQSPDGCTVA 371
>At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1135
Score = 39.1 bits (87), Expect = 0.002
Identities = 23/52 (44%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +2
Query: 113 NINHSTDSKGPSKDYIVTGGLDNLVKVW-SYENNKLELLHTLEGHEMPVVSV 265
N+N S+ + +VT G D +KVW + NKL HT EGHE PV SV
Sbjct: 466 NVNDLAFSQPNQQLCVVTCGEDKTIKVWDAVTGNKL---HTFEGHEAPVYSV 514
Score = 27.5 bits (58), Expect = 7.9
Identities = 20/88 (22%), Positives = 37/88 (42%), Gaps = 5/88 (5%)
Frame = +2
Query: 386 KIVFSPDGSQVATGGHTGKVTVYGIINGTVDK---VLDTRGKFIMSVAWSPDGRY--IAS 550
++V+SPDG + V +Y G + +D + +A+S + + +
Sbjct: 424 RVVWSPDGGLLGVAYSKHIVHIYSYHGGEDLRNHLEIDAHAGNVNDLAFSQPNQQLCVVT 483
Query: 551 GAEGGSVYLFDVSQGKMLHTIEAHAQAV 634
E ++ ++D G LHT E H V
Sbjct: 484 CGEDKTIKVWDAVTGNKLHTFEGHEAPV 511
>At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1137
Score = 39.1 bits (87), Expect = 0.002
Identities = 23/52 (44%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +2
Query: 113 NINHSTDSKGPSKDYIVTGGLDNLVKVW-SYENNKLELLHTLEGHEMPVVSV 265
N+N S+ + +VT G D +KVW + NKL HT EGHE PV SV
Sbjct: 466 NVNDLAFSQPNQQLCVVTCGEDKTIKVWDAVTGNKL---HTFEGHEAPVYSV 514
Score = 27.5 bits (58), Expect = 7.9
Identities = 20/88 (22%), Positives = 37/88 (42%), Gaps = 5/88 (5%)
Frame = +2
Query: 386 KIVFSPDGSQVATGGHTGKVTVYGIINGTVDK---VLDTRGKFIMSVAWSPDGRY--IAS 550
++V+SPDG + V +Y G + +D + +A+S + + +
Sbjct: 424 RVVWSPDGGLLGVAYSKHIVHIYSYHGGEDLRNHLEIDAHAGNVNDLAFSQPNQQLCVVT 483
Query: 551 GAEGGSVYLFDVSQGKMLHTIEAHAQAV 634
E ++ ++D G LHT E H V
Sbjct: 484 CGEDKTIKVWDAVTGNKLHTFEGHEAPV 511
>At1g79990.1 68414.m09356 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:P35606)
[Homo sapiens]; similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:O55029) [Mus
musculus]
Length = 920
Score = 39.1 bits (87), Expect = 0.002
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +2
Query: 140 GPSKDYIVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPD 280
G K Y++TG D+ KVW Y+ + TLEGH V +V+ P+
Sbjct: 196 GGDKPYLITGSDDHTAKVWDYQTK--SCVQTLEGHTHNVSAVSFHPE 240
Score = 32.3 bits (70), Expect = 0.28
Identities = 34/162 (20%), Positives = 67/162 (41%), Gaps = 5/162 (3%)
Frame = +2
Query: 143 PSKDYIVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSP-DGETIAXXXXXXXX 319
P+ Y+++ D L+K+W +E L EGH V+ V +P D T A
Sbjct: 109 PTLPYVLSSSDDMLIKLWDWEKGWL-CTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTI 167
Query: 320 XXXXXXXGQKIREIQTDSSDMWKIVFSPDGSQ--VATGG--HTGKVTVYGIINGTVDKVL 487
+ + + + G + + TG HT KV Y + + L
Sbjct: 168 KIWNLGSPDPNFTLDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQ--TKSCVQTL 225
Query: 488 DTRGKFIMSVAWSPDGRYIASGAEGGSVYLFDVSQGKMLHTI 613
+ + +V++ P+ I +G+E G+V ++ + ++ +T+
Sbjct: 226 EGHTHNVSAVSFHPELPIIITGSEDGTVRIWHATTYRLENTL 267
>At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 39.1 bits (87), Expect = 0.002
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +2
Query: 410 SQVATGGHTGKVTVYGIINGTVDKVLDTRGKFIMSVAWSP-DGRYIASGAEGGSVYLFDV 586
SQVA+ G V V+ + + + K + S+ +S D +ASG++ GSV L+ +
Sbjct: 547 SQVASSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSI 606
Query: 587 SQGKMLHTIEAHA 625
+QG + TI+ A
Sbjct: 607 NQGVSIGTIKTKA 619
>At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 39.1 bits (87), Expect = 0.002
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +2
Query: 410 SQVATGGHTGKVTVYGIINGTVDKVLDTRGKFIMSVAWSP-DGRYIASGAEGGSVYLFDV 586
SQVA+ G V V+ + + + K + S+ +S D +ASG++ GSV L+ +
Sbjct: 547 SQVASSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSI 606
Query: 587 SQGKMLHTIEAHA 625
+QG + TI+ A
Sbjct: 607 NQGVSIGTIKTKA 619
>At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; WD-repeat protein, carrot, PIR:T14352
Length = 444
Score = 38.7 bits (86), Expect = 0.003
Identities = 36/163 (22%), Positives = 66/163 (40%), Gaps = 8/163 (4%)
Frame = +2
Query: 173 LDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETIAXXXXXXXXXXXXXXXGQKI 352
L + V +W + L T++ + PV S+ + DG +A +++
Sbjct: 144 LGDTVYLWDASSGSTSELVTIDEDKGPVTSINWTQDGLDLAVGLDNSEVQLWDCVSNRQV 203
Query: 353 REIQTD-SSDMWKIVFSPDGSQVATGGHTGKVTVYGI-INGTVDKVLDTRGKFIMSVAWS 526
R ++ S + + + D + TGG GK+ + I ++ + + + + WS
Sbjct: 204 RTLRGGHESRVGSLAW--DNHILTTGGMDGKIVNNDVRIRSSIVETYLGHTEEVCGLKWS 261
Query: 527 PDGRYIASGAEGGSVYLFDVSQG------KMLHTIEAHAQAVR 637
G ASG V+++D S + LH E H AVR
Sbjct: 262 ESGNKQASGGNDNVVHIWDRSLASSKQTRQWLHRFEEHTAAVR 304
>At1g52360.1 68414.m05909 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to (SP:O55029) Coatomer
beta' subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:O55029) [Mus musculus]; similar to GI:298096 from
[Homo sapiens]
Length = 926
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = +2
Query: 140 GPSKDYIVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPD 280
G K Y++TG D+ KVW Y+ + TLEGH V +V P+
Sbjct: 196 GGDKPYLITGSDDHTAKVWDYQTK--SCVQTLEGHTHNVSAVCFHPE 240
Score = 31.1 bits (67), Expect = 0.65
Identities = 33/162 (20%), Positives = 65/162 (40%), Gaps = 5/162 (3%)
Frame = +2
Query: 143 PSKDYIVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSP-DGETIAXXXXXXXX 319
P+ Y+++ D L+K+W +E EGH V+ V +P D T A
Sbjct: 109 PTLPYVLSSSDDMLIKLWDWEKG-WACTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTI 167
Query: 320 XXXXXXXGQKIREIQTDSSDMWKIVFSPDGSQ--VATGG--HTGKVTVYGIINGTVDKVL 487
+ + + + G + + TG HT KV Y + + L
Sbjct: 168 KIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQ--TKSCVQTL 225
Query: 488 DTRGKFIMSVAWSPDGRYIASGAEGGSVYLFDVSQGKMLHTI 613
+ + +V + P+ I +G+E G+V ++ + ++ +T+
Sbjct: 226 EGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTL 267
>At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG)
contains seven G-protein beta WD-40 repeats; beta
transducin-like protein, Podospora anserina, gb:L28125;
contains Pfam profiles PF04503: Single-stranded DNA
binding protein, SSDP; PF00400:WD domain, G-beta repeat;
identical to cDNA LEUNIG (LEUNIG) GI:11141604
Length = 931
Score = 38.3 bits (85), Expect = 0.004
Identities = 38/163 (23%), Positives = 59/163 (36%), Gaps = 3/163 (1%)
Frame = +2
Query: 143 PSKDYIVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSP-DGETIAXXXXXXXX 319
PS+ + T D V+VW +N L T GH V S+ P + I
Sbjct: 703 PSQLRLATSSFDKTVRVWDADNKGYSL-RTFMGHSSMVTSLDFHPIKDDLICSCDNDNEI 761
Query: 320 XXXXXXXGQKIREIQTDSSDMWKIVFSPDGSQVATGGHTGKVTVYGIINGTVDKVLDTRG 499
G R + S+ +I F P + V V + + L
Sbjct: 762 RYWSINNGSCTRVYKGGST---QIRFQPRVGKYLAASSANLVNVLDVETQAIRHSLQGHA 818
Query: 500 KFIMSVAWSPDGRYIASGAEG-GSVYLFDV-SQGKMLHTIEAH 622
I SV W P G ++AS +E V+ S+G+ +H + +
Sbjct: 819 NPINSVCWDPSGDFLASVSEDMVKVWTLGTGSEGECVHELSCN 861
Score = 32.7 bits (71), Expect = 0.21
Identities = 20/97 (20%), Positives = 43/97 (44%), Gaps = 1/97 (1%)
Frame = +2
Query: 347 KIREIQTDSSDMWKIVFSPDGSQVATGGHTGKVTVYGIINGTVDKVLDTRGKFIMSVAWS 526
++ ++ ++ + FS DG +A+ GH K ++ L+ I + +S
Sbjct: 643 EVNSVRASTTKVTCCHFSSDGKMLASAGHDKKAVLWYTDTMKPKTTLEEHTAMITDIRFS 702
Query: 527 PDGRYIASGAEGGSVYLFDV-SQGKMLHTIEAHAQAV 634
P +A+ + +V ++D ++G L T H+ V
Sbjct: 703 PSQLRLATSSFDKTVRVWDADNKGYSLRTFMGHSSMV 739
>At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 447
Score = 37.9 bits (84), Expect = 0.006
Identities = 26/117 (22%), Positives = 47/117 (40%), Gaps = 2/117 (1%)
Frame = +2
Query: 251 PVVSVAVSPDGETIAXXXXXXXXXXXXXXXGQKIREIQTDSSDMWKIVFSPDGSQVATGG 430
PV ++SPDG+ +A GQ I ++ + + P+G ATG
Sbjct: 279 PVNHSSLSPDGKLVAVVGDDPDGLLVDTSNGQTIGTLKGHLDYSFASAWHPNGVTFATGN 338
Query: 431 HTGKVTVYGIINGTVDKVLDTRGKF--IMSVAWSPDGRYIASGAEGGSVYLFDVSQG 595
++ + V +G + S+ ++ DGRY+A V+++D G
Sbjct: 339 QDKTCRIWDT-RKLSESVAVLKGNLGAVRSIRFTSDGRYVAMAEPADFVHIYDTKSG 394
Score = 28.7 bits (61), Expect = 3.4
Identities = 20/81 (24%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
Frame = +2
Query: 398 SPDGSQVATGGHTGKVTVYGIINGTVDKVLDTRGKFIMSVAWSPDGRYIASGAEGGSVYL 577
SPDG VA G + NG L + + AW P+G A+G + + +
Sbjct: 286 SPDGKLVAVVGDDPDGLLVDTSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRI 345
Query: 578 FDVSQ-GKMLHTIEAHAQAVR 637
+D + + + ++ + AVR
Sbjct: 346 WDTRKLSESVAVLKGNLGAVR 366
>At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 441
Score = 37.9 bits (84), Expect = 0.006
Identities = 26/117 (22%), Positives = 47/117 (40%), Gaps = 2/117 (1%)
Frame = +2
Query: 251 PVVSVAVSPDGETIAXXXXXXXXXXXXXXXGQKIREIQTDSSDMWKIVFSPDGSQVATGG 430
PV ++SPDG+ +A GQ I ++ + + P+G ATG
Sbjct: 273 PVNHSSLSPDGKLVAVVGDDPDGLLVDTSNGQTIGTLKGHLDYSFASAWHPNGVTFATGN 332
Query: 431 HTGKVTVYGIINGTVDKVLDTRGKF--IMSVAWSPDGRYIASGAEGGSVYLFDVSQG 595
++ + V +G + S+ ++ DGRY+A V+++D G
Sbjct: 333 QDKTCRIWDT-RKLSESVAVLKGNLGAVRSIRFTSDGRYVAMAEPADFVHIYDTKSG 388
Score = 28.7 bits (61), Expect = 3.4
Identities = 20/81 (24%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
Frame = +2
Query: 398 SPDGSQVATGGHTGKVTVYGIINGTVDKVLDTRGKFIMSVAWSPDGRYIASGAEGGSVYL 577
SPDG VA G + NG L + + AW P+G A+G + + +
Sbjct: 280 SPDGKLVAVVGDDPDGLLVDTSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRI 339
Query: 578 FDVSQ-GKMLHTIEAHAQAVR 637
+D + + + ++ + AVR
Sbjct: 340 WDTRKLSESVAVLKGNLGAVR 360
>At5g16750.1 68418.m01961 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats (PF00400);
similar to transducin homolog sazD - Homo sapiens,
EMBL:U02609
Length = 876
Score = 37.5 bits (83), Expect = 0.007
Identities = 32/154 (20%), Positives = 61/154 (39%), Gaps = 6/154 (3%)
Frame = +2
Query: 143 PSKDYIVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETIAXXXXXXXXX 322
P + + G ++VW E L+ + + +GHE PV+ +A G +A
Sbjct: 70 PDDKLLFSAGHSRQIRVWDLET--LKCIRSWKGHEGPVMGMACHASGGLLATAGADRKVL 127
Query: 323 XXXXXXGQKIREIQTDSSDMWKIVFSPDGSQ--VATGGHTGKVTVYGIINGTVDK----V 484
G + + I+F PD ++ + +G V V+ + +K +
Sbjct: 128 VWDVDGGFCTHYFRGHKGVVSSILFHPDSNKNILISGSDDATVRVWDLNAKNTEKKCLAI 187
Query: 485 LDTRGKFIMSVAWSPDGRYIASGAEGGSVYLFDV 586
++ + S+A S DG + S V L+D+
Sbjct: 188 MEKHFSAVTSIALSEDGLTLFSAGRDKVVNLWDL 221
Score = 31.5 bits (68), Expect = 0.49
Identities = 21/94 (22%), Positives = 41/94 (43%), Gaps = 2/94 (2%)
Frame = +2
Query: 359 IQTDSSDMWKIVFSPDGSQVATGGHTGKVTVYGIINGTVDKVLDTRGKF--IMSVAWSPD 532
I+ +S + + SPD + + GH+ ++ V+ + T+ + +G +M +A
Sbjct: 56 IEGESDTLTALALSPDDKLLFSAGHSRQIRVWDL--ETLKCIRSWKGHEGPVMGMACHAS 113
Query: 533 GRYIASGAEGGSVYLFDVSQGKMLHTIEAHAQAV 634
G +A+ V ++DV G H H V
Sbjct: 114 GGLLATAGADRKVLVWDVDGGFCTHYFRGHKGVV 147
Score = 31.1 bits (67), Expect = 0.65
Identities = 36/170 (21%), Positives = 67/170 (39%), Gaps = 11/170 (6%)
Frame = +2
Query: 158 IVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVA---------VSPDGE-TIAXXXX 307
IVTG D V++W+ + + T GH +++VA VS G+ T+
Sbjct: 419 IVTGSKDKTVRLWNATSKSCIGVGT--GHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSL 476
Query: 308 XXXXXXXXXXXGQKIRE-IQTDSSDMWKIVFSPDGSQVATGGHTGKVTVYGIINGTVDKV 484
K R + D+ + + + S V TG +++ + +
Sbjct: 477 DGISEDSEEPINLKTRSVVAAHDKDINSVAVARNDSLVCTGSEDRTASIWRLPDLVHVVT 536
Query: 485 LDTRGKFIMSVAWSPDGRYIASGAEGGSVYLFDVSQGKMLHTIEAHAQAV 634
L + I SV +S + + + + +V ++ +S G L T E H +V
Sbjct: 537 LKGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLKTFEGHTSSV 586
>At3g15980.3 68416.m02022 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 37.5 bits (83), Expect = 0.007
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +2
Query: 140 GPSKDYIVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPD 280
G K Y++TG D+ KVW Y+ + TL+GH V +V P+
Sbjct: 196 GGDKPYLITGSDDHTAKVWDYQTK--SCVQTLDGHTHNVSAVCFHPE 240
Score = 35.1 bits (77), Expect = 0.040
Identities = 35/162 (21%), Positives = 66/162 (40%), Gaps = 5/162 (3%)
Frame = +2
Query: 143 PSKDYIVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSP-DGETIAXXXXXXXX 319
P+ Y+++ D L+K+W +EN EGH V+ V +P D T A
Sbjct: 109 PTLPYVLSSSDDMLIKLWDWENG-WACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTI 167
Query: 320 XXXXXXXGQKIREIQTDSSDMWKIVFSPDGSQ--VATGG--HTGKVTVYGIINGTVDKVL 487
+ + + + G + + TG HT KV Y + + L
Sbjct: 168 KIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQ--TKSCVQTL 225
Query: 488 DTRGKFIMSVAWSPDGRYIASGAEGGSVYLFDVSQGKMLHTI 613
D + +V + P+ I +G+E G+V ++ + ++ +T+
Sbjct: 226 DGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTL 267
>At3g15980.2 68416.m02021 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 37.5 bits (83), Expect = 0.007
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +2
Query: 140 GPSKDYIVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPD 280
G K Y++TG D+ KVW Y+ + TL+GH V +V P+
Sbjct: 196 GGDKPYLITGSDDHTAKVWDYQTK--SCVQTLDGHTHNVSAVCFHPE 240
Score = 35.1 bits (77), Expect = 0.040
Identities = 35/162 (21%), Positives = 66/162 (40%), Gaps = 5/162 (3%)
Frame = +2
Query: 143 PSKDYIVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSP-DGETIAXXXXXXXX 319
P+ Y+++ D L+K+W +EN EGH V+ V +P D T A
Sbjct: 109 PTLPYVLSSSDDMLIKLWDWENG-WACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTI 167
Query: 320 XXXXXXXGQKIREIQTDSSDMWKIVFSPDGSQ--VATGG--HTGKVTVYGIINGTVDKVL 487
+ + + + G + + TG HT KV Y + + L
Sbjct: 168 KIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQ--TKSCVQTL 225
Query: 488 DTRGKFIMSVAWSPDGRYIASGAEGGSVYLFDVSQGKMLHTI 613
D + +V + P+ I +G+E G+V ++ + ++ +T+
Sbjct: 226 DGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTL 267
>At3g15980.1 68416.m02020 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 909
Score = 37.5 bits (83), Expect = 0.007
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +2
Query: 140 GPSKDYIVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPD 280
G K Y++TG D+ KVW Y+ + TL+GH V +V P+
Sbjct: 196 GGDKPYLITGSDDHTAKVWDYQTK--SCVQTLDGHTHNVSAVCFHPE 240
Score = 35.1 bits (77), Expect = 0.040
Identities = 35/162 (21%), Positives = 66/162 (40%), Gaps = 5/162 (3%)
Frame = +2
Query: 143 PSKDYIVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSP-DGETIAXXXXXXXX 319
P+ Y+++ D L+K+W +EN EGH V+ V +P D T A
Sbjct: 109 PTLPYVLSSSDDMLIKLWDWENG-WACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTI 167
Query: 320 XXXXXXXGQKIREIQTDSSDMWKIVFSPDGSQ--VATGG--HTGKVTVYGIINGTVDKVL 487
+ + + + G + + TG HT KV Y + + L
Sbjct: 168 KIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQ--TKSCVQTL 225
Query: 488 DTRGKFIMSVAWSPDGRYIASGAEGGSVYLFDVSQGKMLHTI 613
D + +V + P+ I +G+E G+V ++ + ++ +T+
Sbjct: 226 DGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTL 267
>At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to pre-mRNA splicing
factor PRP17 (SP:O60508) [Homo sapiens]
Length = 457
Score = 37.1 bits (82), Expect = 0.010
Identities = 15/42 (35%), Positives = 26/42 (61%)
Frame = +2
Query: 503 FIMSVAWSPDGRYIASGAEGGSVYLFDVSQGKMLHTIEAHAQ 628
F + +SPDG +ASG+ GSVY++D ++ ++A+ Q
Sbjct: 388 FPIKCNFSPDGETLASGSSDGSVYMYDYKSTALIKKLKAYEQ 429
Score = 32.3 bits (70), Expect = 0.28
Identities = 30/136 (22%), Positives = 54/136 (39%), Gaps = 2/136 (1%)
Frame = +2
Query: 158 IVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETIAXXXXXXXXXXXXXX 337
+ + GLD V VW+ +N + + H PV V S G ++
Sbjct: 176 LASAGLDGAVYVWNVWSNDKKKVRAFLHHNAPVKDVKWSKQGLSLLSCGYDCTSRLFDVE 235
Query: 338 XGQKIREIQTDSSDMWKIVFSPDGSQV-ATGGHTGKVTVYGI-INGTVDKVLDTRGKFIM 511
G + + + D + + F PD V +GG G + ++ I N V + + G I+
Sbjct: 236 RGVETQSFKEDEV-VGVVKFHPDNCNVFLSGGSKGSLRLWDIRANKFVHEYVRDLGP-IL 293
Query: 512 SVAWSPDGRYIASGAE 559
V + G+ S ++
Sbjct: 294 DVEFIAGGKQFISSSD 309
Score = 29.5 bits (63), Expect = 2.0
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +2
Query: 386 KIVFSPDGSQVATGGHTGKVTVYGIINGTVDKVLDTRGKFIMSVAWSPD-GRYIASGAEG 562
K FSPDG +A+G G V +Y + + K L + ++V++ P +A+ +
Sbjct: 391 KCNFSPDGETLASGSSDGSVYMYDYKSTALIKKLKAYEQPCVNVSYHPVLPNVVAACSWN 450
Query: 563 GSVYLFD 583
G V +F+
Sbjct: 451 GQVSVFE 457
>At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 37.1 bits (82), Expect = 0.010
Identities = 20/42 (47%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +2
Query: 143 PSKDY-IVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSV 265
P+K +VT G D L+KVW K L T EGHE PV S+
Sbjct: 464 PNKQMCVVTCGDDKLIKVWDLSGKK---LFTFEGHEAPVYSI 502
>At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis};
Length = 466
Score = 36.7 bits (81), Expect = 0.013
Identities = 37/164 (22%), Positives = 67/164 (40%), Gaps = 9/164 (5%)
Frame = +2
Query: 173 LDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETIAXXXXXXXXXXXXXXXGQKI 352
L + V +W + L T++ + PV S+ + DG +A +++
Sbjct: 141 LGDTVYLWDASSGSTSELVTIDEDKGPVTSINWTQDGLDLAVGLDNSEVQLWDFVSNRQV 200
Query: 353 RE-IQTDSSDMWKIVFSPDGSQVATGGHTGKVTVYGI-INGTVDKVLDTRGKFIMSVAWS 526
R I S + + ++ + TGG GK+ + I ++ + + + WS
Sbjct: 201 RTLIGGHESRVGSLAWN--NHILTTGGMDGKIVNNDVRIRSSIVGTYLGHTEEVCGLKWS 258
Query: 527 PDGRYIASGAEGGSVYLFD---VSQGK----MLHTIEAHAQAVR 637
G+ +ASG V+++D V+ K LH E H AVR
Sbjct: 259 ESGKKLASGGNYNVVHIWDHRSVASSKPTRQWLHRFEEHTAAVR 302
>At5g14050.1 68418.m01644 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to unknown protein (ref|NP_057085.1)
Length = 546
Score = 36.7 bits (81), Expect = 0.013
Identities = 29/153 (18%), Positives = 63/153 (41%), Gaps = 3/153 (1%)
Frame = +2
Query: 158 IVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETIAXXXXXXXXXXXXXX 337
++T GLD ++ + + + + ++ + P+ A P+G +
Sbjct: 259 LLTAGLDRRLRFFQIDGKRNTKIQSIFLEDCPIRKAAFLPNGSQVIVSGRRKFFYSFDLE 318
Query: 338 XGQ--KIRE-IQTDSSDMWKIVFSPDGSQVATGGHTGKVTVYGIINGTVDKVLDTRGKFI 508
+ KI + + + S D + +A G+ G + + + L G +
Sbjct: 319 KAKFDKIGPLVGREEKSLEYFEVSQDSNTIAFVGNEGYILLVSTKTKELIGTLKMNGS-V 377
Query: 509 MSVAWSPDGRYIASGAEGGSVYLFDVSQGKMLH 607
S+A+S DG+++ S G VY++D+ K L+
Sbjct: 378 RSLAFSEDGKHLLSSGGDGQVYVWDLRTMKCLY 410
>At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to Fzr1
(GI:6463679){Homo sapiens}
Length = 481
Score = 36.3 bits (80), Expect = 0.017
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +2
Query: 134 SKGPSKDYIVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETI 292
SK ++ G N + +W Y + + + TL GH M V+ +A SPDG+TI
Sbjct: 393 SKNVNEIVSTHGYSQNQIMLWKYPS--MSKVATLTGHSMRVLYLATSPDGQTI 443
Score = 35.1 bits (77), Expect = 0.040
Identities = 24/93 (25%), Positives = 40/93 (43%), Gaps = 1/93 (1%)
Frame = +2
Query: 347 KIREIQTDSSDMWKIVFSPDGSQVATGGHTGKVTVYGIINGTVDKVLDTR-GKFIMSVAW 523
K+ + + D + V V G V ++ N V K+ D + SV W
Sbjct: 164 KVLDAPSLQDDFYLNVVDWSSQNVLAVGLGTCVYLWTASNSKVTKLCDLGPNDSVCSVQW 223
Query: 524 SPDGRYIASGAEGGSVYLFDVSQGKMLHTIEAH 622
+ +G YI+ G G V ++D +Q K + T+ H
Sbjct: 224 TREGSYISIGTSHGQVQVWDGTQCKRVRTMGGH 256
Score = 27.5 bits (58), Expect = 7.9
Identities = 33/166 (19%), Positives = 63/166 (37%), Gaps = 2/166 (1%)
Frame = +2
Query: 146 SKDYIVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETIAXXXXXXXXXX 325
S ++ GL V +W+ N+K+ L L G V SV + +G I+
Sbjct: 183 SSQNVLAVGLGTCVYLWTASNSKVTKLCDL-GPNDSVCSVQWTREGSYISIGTSHGQVQV 241
Query: 326 XXXXXGQKIREIQTDSSDMWKIVFSPDGSQVATGGHTGKVTVYGIINGTVDKVLDTRG-- 499
G + + ++T + S++ + G + + I D V G
Sbjct: 242 WD---GTQCKRVRTMGGHQTRTGVLAWNSRILSSGSRDRNILQHDIRVQSDFVSKLVGHK 298
Query: 500 KFIMSVAWSPDGRYIASGAEGGSVYLFDVSQGKMLHTIEAHAQAVR 637
+ + WS D R +ASG + +++ + + + H AV+
Sbjct: 299 SEVCGLKWSHDDRELASGGNDNQLLVWNNHSQQPILKLTEHTAAVK 344
>At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 WD
repeats (PF00400); similar to Fzr1 (GI:6463679) {Homo
sapiens}; similar to WD repeat protein Srw1
-Schizosaccharomyces pombe,PID:d1023012
Length = 475
Score = 36.3 bits (80), Expect = 0.017
Identities = 19/42 (45%), Positives = 24/42 (57%)
Frame = +2
Query: 167 GGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETI 292
G N + VW Y + L TL GH V+ +AVSPDG+TI
Sbjct: 398 GYSQNQIIVWKYPT--MSKLATLTGHSYRVLYLAVSPDGQTI 437
Score = 35.5 bits (78), Expect = 0.030
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +2
Query: 443 VTVYGIINGTVDKVLDTR-GKFIMSVAWSPDGRYIASGAEGGSVYLFDVSQGKMLHTIEA 619
V ++ + V K+ D + + SV W+ G ++A G G+V ++DV + K + T+E
Sbjct: 190 VYLWNACSSKVTKLCDLGVDETVCSVGWALRGTHLAIGTSSGTVQIWDVLRCKNIRTMEG 249
Query: 620 H 622
H
Sbjct: 250 H 250
Score = 33.5 bits (73), Expect = 0.12
Identities = 38/166 (22%), Positives = 67/166 (40%), Gaps = 2/166 (1%)
Frame = +2
Query: 146 SKDYIVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETIAXXXXXXXXXX 325
S ++ GL N V +W+ ++K+ L L G + V SV + G +A
Sbjct: 177 SAQNVLAVGLGNCVYLWNACSSKVTKLCDL-GVDETVCSVGWALRGTHLAIGTSSGTVQI 235
Query: 326 XXXXXGQKIREIQTDSSDMWKIVFSPDGSQVATGGHTGKVTVYGIINGTVDKVLDTRG-- 499
+ IR ++ + + +S S V + G K + I D V +G
Sbjct: 236 WDVLRCKNIRTMEGHRLRVGALAWS---SSVLSSGSRDKSILQRDIRTQEDHVSKLKGHK 292
Query: 500 KFIMSVAWSPDGRYIASGAEGGSVYLFDVSQGKMLHTIEAHAQAVR 637
I + WS D R +ASG +++++ + + HA AV+
Sbjct: 293 SEICGLKWSSDNRELASGGNDNKLFVWNQHSTQPVLRFCEHAAAVK 338
>At3g49180.1 68416.m05375 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
GTP-binding protein beta chain homolog, Nicotiana
tabacum, PIR:T16970
Length = 438
Score = 36.3 bits (80), Expect = 0.017
Identities = 42/177 (23%), Positives = 72/177 (40%), Gaps = 17/177 (9%)
Frame = +2
Query: 158 IVTGGLDNLVKVWS-------YENNKLELL--HTLEGHEMPVVSVAVSPDG--ETIAXXX 304
+V+G D ++VWS ++ + L H H M V + + G I
Sbjct: 135 LVSGSQDGSIRVWSLIRLFDDFQRQQGNTLYEHNFNEHTMSVTDIVIDYGGCNAVIISSS 194
Query: 305 XXXXXXXXXXXXGQKIREIQTDSSDMWKIVFSPDGSQVATGGHTGKVTVYGIINGTVD-- 478
G+ ++ I S + + P G G K+ + G IN T +
Sbjct: 195 EDRTCKVWSLSRGKLLKNIIFPSV-INALALDPGGCVFYAGARDSKIYI-GAINATSEYG 252
Query: 479 -KVLDT---RGKFIMSVAWSPDGRYIASGAEGGSVYLFDVSQGKMLHTIEAHAQAVR 637
+VL + +GK I +A+ DG + SG+E G V ++D + + T+ HA+ R
Sbjct: 253 TQVLGSVSEKGKAITCLAYCADGNLLISGSEDGVVCVWDPKSLRHVRTL-IHAKGSR 308
Score = 34.3 bits (75), Expect = 0.069
Identities = 14/43 (32%), Positives = 26/43 (60%)
Frame = +2
Query: 506 IMSVAWSPDGRYIASGAEGGSVYLFDVSQGKMLHTIEAHAQAV 634
I ++A + +G Y+ G G +YL++V+ GK+L H ++V
Sbjct: 81 IKALAANNEGTYLVGGGISGDIYLWEVATGKLLKKWHGHYRSV 123
>At3g21540.1 68416.m02717 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (10 copies); similar to WD-repeat protein
3 (SP:Q9UNX4) [Homo sapiens]
Length = 955
Score = 36.3 bits (80), Expect = 0.017
Identities = 19/50 (38%), Positives = 30/50 (60%)
Frame = +2
Query: 143 PSKDYIVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETI 292
P +I LD+ VKV+ ++ K L +L GH++PV+ + +S DGE I
Sbjct: 550 PDAKHIAVALLDSTVKVFYMDSLKFYL--SLYGHKLPVMCIDISSDGELI 597
Score = 34.3 bits (75), Expect = 0.069
Identities = 18/44 (40%), Positives = 26/44 (59%)
Frame = +2
Query: 155 YIVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGE 286
Y+ + G D LVK W + +K E L TLEGH + +A+S G+
Sbjct: 638 YLFSIGKDRLVKYW--DADKFEHLLTLEGHHAEIWCLAISNRGD 679
>At3g18060.1 68416.m02297 transducin family protein / WD-40 repeat
family protein similar to 66 kDa stress protein
(SP:P90587) [Physarum polycephalum (Slime mold)];
similar to WDR1 protein GB:AAD05042 [Gallus gallus]
(Genomics 56 (1), 59-69 (1999)); contains 11 WD-40
repeats (PF00400)
Length = 609
Score = 36.3 bits (80), Expect = 0.017
Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 6/168 (3%)
Frame = +2
Query: 149 KDYIVTGGLDNLVKVWSYENNKLELLHTLE-GHEMPVVSVA-VSPDGETIAXXXXXXXXX 322
++ IVT G DN + SY++++ +++ G++ +S+A +SPD +
Sbjct: 377 EEEIVTSGYDNKISRISYKDDQCTNEESIDIGNQPKDLSLAPLSPDLLLVTFESGVVFLR 436
Query: 323 XXXXXXGQKIREIQTDSSDMWKIVFSPDGSQVATGGHTGKVTVYGIING---TVDKVLDT 493
+ I T + +PDG++ GG GK+ +Y ING T + VL+
Sbjct: 437 DGKVVSTINLGFIVT------ALAVTPDGTEAVIGGQDGKLHLYS-INGDSLTEEAVLER 489
Query: 494 RGKFIMSVAWSPDGRYIASGAEGGSVYLFD-VSQGKMLHTIEAHAQAV 634
I + +SPD AS ++D VS+ L + H+ +
Sbjct: 490 HRGAISVIRYSPDLSMFASADLNREAVVWDRVSREMKLKNMLYHSARI 537
Score = 32.7 bits (71), Expect = 0.21
Identities = 30/123 (24%), Positives = 50/123 (40%), Gaps = 5/123 (4%)
Frame = +2
Query: 236 EGHEMPVVSVAVSPDGETIAXXXXXXXXXXXXXXXGQKIREIQTDSSDMWKIV-FSPDGS 412
+GH V+S A+ P K + + S+ V F+PDGS
Sbjct: 141 DGHSRRVLSCAIKPTRPFRIVTCGEDFLVNFYEGPPFKFKLSSREHSNFVNCVRFAPDGS 200
Query: 413 QVATGGHTGKVTVYG----IINGTVDKVLDTRGKFIMSVAWSPDGRYIASGAEGGSVYLF 580
+ T K +Y I G + +G I +V+WSPDG+ + + + S ++
Sbjct: 201 KFITVSSDKKGIIYDGKTCEILGELSSDDGHKGS-IYAVSWSPDGKQVLTVSADKSAKIW 259
Query: 581 DVS 589
D+S
Sbjct: 260 DIS 262
Score = 28.7 bits (61), Expect = 3.4
Identities = 27/117 (23%), Positives = 51/117 (43%), Gaps = 4/117 (3%)
Frame = +2
Query: 254 VVSVAVSPDGETIAXXXXXXXXXXXXXXXGQKIRE---IQTDSSDMWKIVFSPDGSQVAT 424
V ++AV+PDG T A G + E ++ + I +SPD S A+
Sbjct: 450 VTALAVTPDG-TEAVIGGQDGKLHLYSINGDSLTEEAVLERHRGAISVIRYSPDLSMFAS 508
Query: 425 GGHTGKVTVYGIINGTVD-KVLDTRGKFIMSVAWSPDGRYIASGAEGGSVYLFDVSQ 592
+ V+ ++ + K + I +AWSP+ +A+G+ V +++V +
Sbjct: 509 ADLNREAVVWDRVSREMKLKNMLYHSARINCLAWSPNSTMVATGSLDTCVIVYEVDK 565
>At3g09080.1 68416.m01067 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats; similar to
JNK-binding protein JNKBP1 (GP:6069583) [Mus musculus]
Length = 1026
Score = 36.3 bits (80), Expect = 0.017
Identities = 21/93 (22%), Positives = 52/93 (55%), Gaps = 7/93 (7%)
Frame = +2
Query: 380 MWKIVFSPDGSQVATGGHTGKVTVYGIIN----GTVDK-VLDTRG-KF-IMSVAWSPDGR 538
+W + F + + + + + GI++ G ++ +++T G KF ++A S DG+
Sbjct: 339 LWDLAFQVNPLEANASSNPSESSTQGIMHLASAGIFERDLVETCGSKFGFRALAVSEDGK 398
Query: 539 YIASGAEGGSVYLFDVSQGKMLHTIEAHAQAVR 637
Y+A+G GG+++++D+ + + ++AH ++
Sbjct: 399 YLAAGDCGGNLHIYDLQESEYTCFMDAHEAEIQ 431
>At5g50970.1 68418.m06321 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 512
Score = 35.9 bits (79), Expect = 0.023
Identities = 16/45 (35%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Frame = +2
Query: 506 IMSVAWSPDGRYIASGAEGGSVYLFDV--SQGKMLHTIEAHAQAV 634
+++ +WSPDG YI SG+ +++FD+ + K +I+AH + V
Sbjct: 441 LINQSWSPDGLYITSGSVDPVIHVFDIRYNARKPTQSIKAHQKRV 485
>At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]; similar to rab11 binding protein GI:4512103
from [Bos taurus]
Length = 593
Score = 35.9 bits (79), Expect = 0.023
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +2
Query: 350 IREIQTDSSDMWKIVFSPDGSQVATGGHTGKVTVYGI 460
+++I +W + FSPDG +ATGG G V ++ I
Sbjct: 191 VQKINGHKGKIWTLKFSPDGKYLATGGEDGVVKIWRI 227
Score = 33.5 bits (73), Expect = 0.12
Identities = 15/39 (38%), Positives = 27/39 (69%)
Frame = +2
Query: 473 VDKVLDTRGKFIMSVAWSPDGRYIASGAEGGSVYLFDVS 589
V K+ +GK I ++ +SPDG+Y+A+G E G V ++ ++
Sbjct: 191 VQKINGHKGK-IWTLKFSPDGKYLATGGEDGVVKIWRIT 228
>At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to fizzy-related
protein (GI:5813825) Drosophila melanogaster,
PID:g2326419;
Length = 518
Score = 35.5 bits (78), Expect = 0.030
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +2
Query: 104 AWA-NINHSTDSKGPSKDYIVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPD 280
AW+ N+N + G S++ I+ VW Y + + TL GH V+ +AVSPD
Sbjct: 428 AWSKNVNELVSTHGYSQNQII---------VWKYPT--MSKIATLTGHTYRVLYLAVSPD 476
Query: 281 GETI 292
G+TI
Sbjct: 477 GQTI 480
Score = 34.7 bits (76), Expect = 0.052
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +2
Query: 443 VTVYGIINGTVDKVLDTRGK-FIMSVAWSPDGRYIASGAEGGSVYLFDVSQGKMLHTIEA 619
V ++ + V K+ D + + SV W+ G ++A G G V ++D S+ K T+E
Sbjct: 233 VYLWNACSSKVTKLCDLGAEDSVCSVGWALRGTHLAVGTSTGKVQIWDASRCKRTRTMEG 292
Query: 620 H 622
H
Sbjct: 293 H 293
Score = 30.7 bits (66), Expect = 0.85
Identities = 36/166 (21%), Positives = 65/166 (39%), Gaps = 2/166 (1%)
Frame = +2
Query: 146 SKDYIVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETIAXXXXXXXXXX 325
S ++ GL N V +W+ ++K+ L L G E V SV + G +A
Sbjct: 220 SAQNVLAVGLGNCVYLWNACSSKVTKLCDL-GAEDSVCSVGWALRGTHLAVGTSTGKVQI 278
Query: 326 XXXXXGQKIREIQTDSSDMWKIVFSPDGSQVATGGHTGKVTVYGIINGTVDKVLDTRG-- 499
++ R ++ + + + GS V + G K + I D V G
Sbjct: 279 WDASRCKRTRTMEGHRLRVGALAW---GSSVLSSGSRDKSILQRDIRCQEDHVSKLAGHK 335
Query: 500 KFIMSVAWSPDGRYIASGAEGGSVYLFDVSQGKMLHTIEAHAQAVR 637
+ + WS D R +ASG +++++ + + H AV+
Sbjct: 336 SEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPVLKYSEHTAAVK 381
>At2g01330.1 68415.m00050 transducin family protein / WD-40 repeat
family protein contains 10 WD-40 repeats (PF00400);
similar to 66kDa stress protein (SWISS-PROT: P90587)[
Physarum polycephalum (Slime mold)]
Length = 474
Score = 35.5 bits (78), Expect = 0.030
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Frame = +2
Query: 392 VFSPDGSQVATGGHTGKVTVYGII---NGTVDKVLDTRGKFIMSVAWSPDGRYIASGAEG 562
V SPDG + GG GK+ +Y + N + VL+ + + +SPD ASG
Sbjct: 318 VISPDGKEAIVGGQDGKLHIYSVSGDNNLKEEAVLEKHRGALTVIRYSPDLTMFASGDAN 377
Query: 563 GSVYLFD 583
++D
Sbjct: 378 REAVVWD 384
Score = 29.5 bits (63), Expect = 2.0
Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Frame = +2
Query: 389 IVFSPDGSQVATGGHTGKVTVY-GIINGTVDKVLDTRGK--FIMSVAWSPDGRYIASGAE 559
I +SPDG++ T K +Y G V ++ G I +V+WSPD + + + +
Sbjct: 57 IRYSPDGTKFITVSSDKKGMIYDGKTGDKVGELASEDGHKGSIYAVSWSPDSKRVLTVSA 116
Query: 560 GGSVYLFDVSQ 592
S +++V++
Sbjct: 117 DKSAKVWEVAE 127
Score = 28.7 bits (61), Expect = 3.4
Identities = 25/118 (21%), Positives = 51/118 (43%), Gaps = 5/118 (4%)
Frame = +2
Query: 254 VVSVAVSPDGETIAXXXXXXXXXXXXXXXGQKIRE---IQTDSSDMWKIVFSPDGSQVAT 424
V + +SPDG+ ++E ++ + I +SPD + A+
Sbjct: 314 VAASVISPDGKEAIVGGQDGKLHIYSVSGDNNLKEEAVLEKHRGALTVIRYSPDLTMFAS 373
Query: 425 GGHTGKVTVYGIINGTV--DKVLDTRGKFIMSVAWSPDGRYIASGAEGGSVYLFDVSQ 592
G + V+ V + +L + I S+AWSP+ + +A+G+ V +++V +
Sbjct: 374 GDANREAVVWDRETKQVKLNNMLFHTAR-INSLAWSPNNKMVATGSIDTCVIVYEVDK 430
>At5g15550.2 68418.m01821 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 402
Score = 35.1 bits (77), Expect = 0.040
Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = +2
Query: 140 GPSKDYIVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAV--SPDGETI 292
G S +I+TG D L +VWS + H LEGH + SVA+ S D ET+
Sbjct: 118 GSSPRFILTGCYDGLGRVWSSAGS---CSHILEGHSGAISSVALVNSNDAETV 167
>At5g15550.1 68418.m01820 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 433
Score = 35.1 bits (77), Expect = 0.040
Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = +2
Query: 140 GPSKDYIVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAV--SPDGETI 292
G S +I+TG D L +VWS + H LEGH + SVA+ S D ET+
Sbjct: 118 GSSPRFILTGCYDGLGRVWSSAGS---CSHILEGHSGAISSVALVNSNDAETV 167
Score = 27.9 bits (59), Expect = 6.0
Identities = 27/142 (19%), Positives = 46/142 (32%), Gaps = 3/142 (2%)
Frame = +2
Query: 143 PSKDYIVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETIAXXXXXXXXX 322
P D I + D+ V+ W E K + L+ G + V V A
Sbjct: 281 PEHDVIYSSSWDHSVRRWDVETGK-DSLNLFCGKALNTVDVGGESSALIAAGGSDPILRV 339
Query: 323 XXXXXXGQKIREIQTDSSDMWKIVFSPDGSQ---VATGGHTGKVTVYGIINGTVDKVLDT 493
G Q S W S + + + GK+ ++ + V+DT
Sbjct: 340 WDPRKPGTSAPVFQFSSHSSWISACKWHKSSWFHLLSASYDGKIMLWDLRTAWPLSVIDT 399
Query: 494 RGKFIMSVAWSPDGRYIASGAE 559
++S W ++ GA+
Sbjct: 400 HNDKVLSADWWKGESVVSGGAD 421
>At2g33340.2 68415.m04087 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 537
Score = 35.1 bits (77), Expect = 0.040
Identities = 33/168 (19%), Positives = 61/168 (36%), Gaps = 5/168 (2%)
Frame = +2
Query: 146 SKDYIVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETIAXXXXXXXXXX 325
SKD I TGG+D + ++ ++L TL GH V SV D + +
Sbjct: 233 SKDVIATGGVDATAVL--FDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRI 290
Query: 326 XXXXXGQKIR---EIQTDSSDMWKIVFSPDGSQVATGGHTGKVTVYGIINGTVDKVL--D 490
+ S+++ + P + G Y + +G+ + D
Sbjct: 291 WRNPGDGNYACGYTLNDHSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDD 350
Query: 491 TRGKFIMSVAWSPDGRYIASGAEGGSVYLFDVSQGKMLHTIEAHAQAV 634
++ + A+ PDG + +G V ++DV + + H V
Sbjct: 351 SKNVDYTAAAFHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEV 398
>At2g33340.1 68415.m04086 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 565
Score = 35.1 bits (77), Expect = 0.040
Identities = 33/168 (19%), Positives = 61/168 (36%), Gaps = 5/168 (2%)
Frame = +2
Query: 146 SKDYIVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETIAXXXXXXXXXX 325
SKD I TGG+D + ++ ++L TL GH V SV D + +
Sbjct: 233 SKDVIATGGVDATAVL--FDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRI 290
Query: 326 XXXXXGQKIR---EIQTDSSDMWKIVFSPDGSQVATGGHTGKVTVYGIINGTVDKVL--D 490
+ S+++ + P + G Y + +G+ + D
Sbjct: 291 WRNPGDGNYACGYTLNDHSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDD 350
Query: 491 TRGKFIMSVAWSPDGRYIASGAEGGSVYLFDVSQGKMLHTIEAHAQAV 634
++ + A+ PDG + +G V ++DV + + H V
Sbjct: 351 SKNVDYTAAAFHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEV 398
>At5g52250.1 68418.m06485 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to photomorphogenesis repressor PnCOP1
(GI:11127996) [Ipomoea nil]
Length = 385
Score = 34.3 bits (75), Expect = 0.069
Identities = 27/91 (29%), Positives = 38/91 (41%), Gaps = 10/91 (10%)
Frame = +2
Query: 350 IREIQTDSSDMWKIVFSPDGSQVATGGHTGKVTVY---GIINGTVDKVLDTRGKF----- 505
+ T S + I F P G +ATGG K+ Y ++ D V +
Sbjct: 64 VSSASTGSDAIGAIEFDPTGEIIATGGIARKIRSYRLSSLLESRDDHVTASESYICTPAK 123
Query: 506 IMSVAWSPD--GRYIASGAEGGSVYLFDVSQ 592
+ S+ W PD GR I SG G V +DV +
Sbjct: 124 LSSLKWRPDFSGRVIGSGDYDGVVTEYDVEK 154
>At3g52190.1 68416.m05731 transducin family protein / WD-40 repeat
family protein similar to St12p protein (GI:166878)
{Arabidopsis thaliana}; contains Pfam profile: PF00400
WD domain, G-beta repeat
Length = 398
Score = 34.3 bits (75), Expect = 0.069
Identities = 35/156 (22%), Positives = 64/156 (41%), Gaps = 6/156 (3%)
Frame = +2
Query: 158 IVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETIAXXXXXXXXXXXXXX 337
+ GG+D +++ + N + +L + H+ + + S D E +A
Sbjct: 137 LAVGGVDGCLRIMEWPNLSV-ILDEPKAHKS-IRDMDFSLDSEFLATTSTDGSARIWKAE 194
Query: 338 XGQKIREIQTDSSDMWKIV-FSPDGSQ-----VATGGHTGKVTVYGIINGTVDKVLDTRG 499
G + ++ + ++ FS DG++ A G T V VY I
Sbjct: 195 DGFPLSTLERSGDENIELCRFSKDGTKPFLFCAAQRGDTPMVNVYDISTWKKLGFKKLSR 254
Query: 500 KFIMSVAWSPDGRYIASGAEGGSVYLFDVSQGKMLH 607
K ++A S DG+YIA G + G V + +V ++ H
Sbjct: 255 KTASTMAVSLDGKYIALGGKDGDVSVAEVKTMEIYH 290
Score = 32.7 bits (71), Expect = 0.21
Identities = 22/76 (28%), Positives = 37/76 (48%)
Frame = +2
Query: 389 IVFSPDGSQVATGGHTGKVTVYGIINGTVDKVLDTRGKFIMSVAWSPDGRYIASGAEGGS 568
+ FS DGS++A GG G + + N +V K I + +S D ++A+ + GS
Sbjct: 128 MAFSFDGSKLAVGGVDGCLRIMEWPNLSVILDEPKAHKSIRDMDFSLDSEFLATTSTDGS 187
Query: 569 VYLFDVSQGKMLHTIE 616
++ G L T+E
Sbjct: 188 ARIWKAEDGFPLSTLE 203
>At2g46290.1 68415.m05758 eukaryotic translation initiation factor 3
subunit 2, putative / eIF-3 beta, putative / eIF3i,
putative strong similarity to SP|Q38884 Eukaryotic
translation initiation factor 3 subunit 2 (eIF-3 beta)
(eIF3 p36) (eIF3i) (TGF-beta receptor interacting
protein 1) (TRIP-1) {Arabidopsis thaliana}; contains
Pfam PF00400: WD domain, G-beta repeat (5
copies)|19799885|gb|AU231175.1|AU231175
Length = 355
Score = 34.3 bits (75), Expect = 0.069
Identities = 41/161 (25%), Positives = 61/161 (37%), Gaps = 15/161 (9%)
Frame = +2
Query: 140 GPSKDYIVTGGLDNLVKVWSYENNKLELLHTLE-GHEMPVVSVAVSPDGETIAXXXXXXX 316
GP IV+GG D +++W E KL E GH+ + S+ + D
Sbjct: 184 GPLNQTIVSGGEDAAIRIWDAETGKLLKQSDEEVGHKEAITSLCKAADDSHFLTGSHDKT 243
Query: 317 XXXXXXXXGQKIREIQTDSSDMWKIVFSP-----------DGSQVATGGH-TGKVTVYGI 460
I+ T + + SP D S V T H GK
Sbjct: 244 AKLWDMRTLTLIK-TYTTVVPVNAVAMSPLLNHVVLGGGQDASAVTTTDHRAGKFEAKFY 302
Query: 461 INGTVDKVLDTRGKF--IMSVAWSPDGRYIASGAEGGSVYL 577
+++ +G F I ++A+SPDG+ +SG E G V L
Sbjct: 303 DTILQEEIGGVKGHFGPINALAFSPDGKSFSSGGEDGYVRL 343
Score = 28.7 bits (61), Expect(2) = 0.40
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +2
Query: 500 KFIMSVAWSPDGRYIASGAEGGSVYLFDVSQGKML 604
K I W P + I SG E ++ ++D GK+L
Sbjct: 176 KKINRAVWGPLNQTIVSGGEDAAIRIWDAETGKLL 210
Score = 21.8 bits (44), Expect(2) = 0.40
Identities = 23/87 (26%), Positives = 35/87 (40%), Gaps = 1/87 (1%)
Frame = +2
Query: 158 IVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETIAXXXXXXXXXXXXXX 337
++TG D K+W ++ K EL G P SV S G+ +A
Sbjct: 94 LITGSADQTAKLWDVKSGK-ELFTFKFG--APARSVDFSV-GDHLAVITTDHFVGTSSAI 149
Query: 338 XGQKIREIQTDS-SDMWKIVFSPDGSQ 415
++I E D D ++ SPDG +
Sbjct: 150 HVKRIAEDPEDQVGDSVLVLQSPDGKK 176
>At2g46280.2 68415.m05756 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 34.3 bits (75), Expect = 0.069
Identities = 42/185 (22%), Positives = 70/185 (37%), Gaps = 14/185 (7%)
Frame = +2
Query: 65 KKENAHEDLIYGCAWANINHSTDSKGPSKDYIVTGGLDNLVKVWSYENNKLELLHTLE-G 241
++++A L+ C + GP IV+GG D ++++W E KL E G
Sbjct: 132 EEQDAESVLVLHCPDGKKRINRAVWGPLNQTIVSGGEDKVIRIWDAETGKLLKQSDEEVG 191
Query: 242 HEMPVVSVAVSPDGETIAXXXXXXXXXXXXXXXGQKIREIQT-------DSSDMWKIVF- 397
H+ + S+ + D ++ T S + V
Sbjct: 192 HKKDITSLCKAADDSHFLTGSLDKTAKLWDMRTLTLLKTYTTVVPVNAVSLSPLLNHVVL 251
Query: 398 --SPDGSQVATGGH-TGKVTVYGIINGTVDKVLDTRGKF--IMSVAWSPDGRYIASGAEG 562
D S V T H GK +++ +G F I ++A++PDG+ +SG E
Sbjct: 252 GGGQDASAVTTTDHRAGKFEAKFYDKILQEEIGGVKGHFGPINALAFNPDGKSFSSGGED 311
Query: 563 GSVYL 577
G V L
Sbjct: 312 GYVRL 316
>At2g46280.1 68415.m05755 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 34.3 bits (75), Expect = 0.069
Identities = 42/185 (22%), Positives = 70/185 (37%), Gaps = 14/185 (7%)
Frame = +2
Query: 65 KKENAHEDLIYGCAWANINHSTDSKGPSKDYIVTGGLDNLVKVWSYENNKLELLHTLE-G 241
++++A L+ C + GP IV+GG D ++++W E KL E G
Sbjct: 132 EEQDAESVLVLHCPDGKKRINRAVWGPLNQTIVSGGEDKVIRIWDAETGKLLKQSDEEVG 191
Query: 242 HEMPVVSVAVSPDGETIAXXXXXXXXXXXXXXXGQKIREIQT-------DSSDMWKIVF- 397
H+ + S+ + D ++ T S + V
Sbjct: 192 HKKDITSLCKAADDSHFLTGSLDKTAKLWDMRTLTLLKTYTTVVPVNAVSLSPLLNHVVL 251
Query: 398 --SPDGSQVATGGH-TGKVTVYGIINGTVDKVLDTRGKF--IMSVAWSPDGRYIASGAEG 562
D S V T H GK +++ +G F I ++A++PDG+ +SG E
Sbjct: 252 GGGQDASAVTTTDHRAGKFEAKFYDKILQEEIGGVKGHFGPINALAFNPDGKSFSSGGED 311
Query: 563 GSVYL 577
G V L
Sbjct: 312 GYVRL 316
>At2g18900.1 68415.m02205 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to LACK protective antigen (GI:13625467)
[Leishmania donovani]
Length = 804
Score = 34.3 bits (75), Expect = 0.069
Identities = 21/81 (25%), Positives = 39/81 (48%)
Frame = +2
Query: 371 SSDMWKIVFSPDGSQVATGGHTGKVTVYGIINGTVDKVLDTRGKFIMSVAWSPDGRYIAS 550
S+++ + FS DG+ + +GG G + V+ + G K L G ++ WSPD +
Sbjct: 283 SAEVNVLNFSSDGAYLYSGGREGVLVVWQLDTGK-KKFLPRIGSPLLYFMWSPDPTLSSV 341
Query: 551 GAEGGSVYLFDVSQGKMLHTI 613
++L + ++L TI
Sbjct: 342 VCADNQIHLLKMPSMEILRTI 362
>At3g56900.1 68416.m06329 aladin-related / adracalin-related weak
similarity to SP|Q9NRG9 Aladin (Adracalin) (GL003) {Homo
sapiens}; non-consensus AT-AC splice sites at intron 6
Length = 447
Score = 33.9 bits (74), Expect = 0.092
Identities = 15/31 (48%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Frame = +2
Query: 506 IMSVAWSPDGRYIASGA-EGGSVYLFDVSQG 595
I +++WSP GRY+AS + + S ++DVSQG
Sbjct: 215 ISALSWSPCGRYLASASYDSSSFTIWDVSQG 245
>At3g05090.2 68416.m00553 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 33.9 bits (74), Expect = 0.092
Identities = 18/85 (21%), Positives = 37/85 (43%)
Frame = +2
Query: 380 MWKIVFSPDGSQVATGGHTGKVTVYGIINGTVDKVLDTRGKFIMSVAWSPDGRYIASGAE 559
++ + + G+ + +GG + V+ G+ L + + GR+ SG+
Sbjct: 216 VYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFCLSGSS 275
Query: 560 GGSVYLFDVSQGKMLHTIEAHAQAV 634
+ L+D+ Q + LHT H +V
Sbjct: 276 DSMIRLWDLGQQRCLHTYAVHTDSV 300
Score = 31.1 bits (67), Expect = 0.65
Identities = 26/122 (21%), Positives = 51/122 (41%), Gaps = 2/122 (1%)
Frame = +2
Query: 101 CAWAN-INHSTDSKGPSKDYIVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSP 277
CA N ++ S + Y+ TG D +K W+++ + T E H V A++
Sbjct: 35 CAGINCLDVLKSSVSNDQSYLFTGSRDGTLKRWAFDEDATFCSATFESHVDWVNDAALAG 94
Query: 278 DGETIAXXXXXXXXXXXXXXXGQKIREIQTDSSDMWKI-VFSPDGSQVATGGHTGKVTVY 454
+ ++ G R ++ S + + V + + + VA+GG G+V ++
Sbjct: 95 ESTLVSCSSDTTVKTWDGLSDGVCTRTLRQHSDYVTCLAVAAKNNNVVASGGLGGEVFIW 154
Query: 455 GI 460
I
Sbjct: 155 DI 156
>At3g05090.1 68416.m00552 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 33.9 bits (74), Expect = 0.092
Identities = 18/85 (21%), Positives = 37/85 (43%)
Frame = +2
Query: 380 MWKIVFSPDGSQVATGGHTGKVTVYGIINGTVDKVLDTRGKFIMSVAWSPDGRYIASGAE 559
++ + + G+ + +GG + V+ G+ L + + GR+ SG+
Sbjct: 216 VYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFCLSGSS 275
Query: 560 GGSVYLFDVSQGKMLHTIEAHAQAV 634
+ L+D+ Q + LHT H +V
Sbjct: 276 DSMIRLWDLGQQRCLHTYAVHTDSV 300
Score = 31.1 bits (67), Expect = 0.65
Identities = 26/122 (21%), Positives = 51/122 (41%), Gaps = 2/122 (1%)
Frame = +2
Query: 101 CAWAN-INHSTDSKGPSKDYIVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSP 277
CA N ++ S + Y+ TG D +K W+++ + T E H V A++
Sbjct: 35 CAGINCLDVLKSSVSNDQSYLFTGSRDGTLKRWAFDEDATFCSATFESHVDWVNDAALAG 94
Query: 278 DGETIAXXXXXXXXXXXXXXXGQKIREIQTDSSDMWKI-VFSPDGSQVATGGHTGKVTVY 454
+ ++ G R ++ S + + V + + + VA+GG G+V ++
Sbjct: 95 ESTLVSCSSDTTVKTWDGLSDGVCTRTLRQHSDYVTCLAVAAKNNNVVASGGLGGEVFIW 154
Query: 455 GI 460
I
Sbjct: 155 DI 156
>At2g46280.3 68415.m05757 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 254
Score = 33.5 bits (73), Expect = 0.12
Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +2
Query: 65 KKENAHEDLIYGCAWANINHSTDSKGPSKDYIVTGGLDNLVKVWSYENNKLELLHTLE-G 241
++++A L+ C + GP IV+GG D ++++W E KL E G
Sbjct: 132 EEQDAESVLVLHCPDGKKRINRAVWGPLNQTIVSGGEDKVIRIWDAETGKLLKQSDEEVG 191
Query: 242 HEMPVVSVAVSPD 280
H+ + S+ + D
Sbjct: 192 HKKDITSLCKAAD 204
>At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 33.5 bits (73), Expect = 0.12
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +2
Query: 143 PSKDY-IVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSV 265
P+K ++T G D +KVW HT EGHE PV SV
Sbjct: 473 PNKQLCVITCGDDKTIKVWDAATGVKR--HTFEGHEAPVYSV 512
>At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 33.5 bits (73), Expect = 0.12
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +2
Query: 143 PSKDY-IVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSV 265
P+K ++T G D +KVW HT EGHE PV SV
Sbjct: 473 PNKQLCVITCGDDKTIKVWDAATGVKR--HTFEGHEAPVYSV 512
>At4g03020.1 68417.m00410 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to L. erythrorhizon LEC14B, GenBank accession
number Q40153
Length = 493
Score = 33.1 bits (72), Expect = 0.16
Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
Frame = +2
Query: 374 SDMWKIVFSPDGSQVATGGHTGKVTVYGIINGTVDKVLDTRGKF-IMSVAWSPDGRYIAS 550
+ M IV D +T H ++ ++ + D+ D F I SV +S DGR + +
Sbjct: 189 ASMSPIVHIVDVGSGSTESHANVTEIHDGLDFSSDE--DGGYSFGIFSVKFSTDGREVVA 246
Query: 551 GAEGGSVYLFDVSQGKMLHTIEAHAQAV 634
G+ S+Y++D+ ++ AH V
Sbjct: 247 GSSDDSIYVYDLEANRVSLRTVAHTSDV 274
Score = 33.1 bits (72), Expect = 0.16
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +2
Query: 482 VLDTRGKFIMSVAWSPDGRYIASGAEGGSVYLFDVSQGKMLHTIEAHAQAVR 637
VL T + S A S +YI +G+ SVY++D+ G + ++ H+ VR
Sbjct: 396 VLRTLIRCYFSPAHSTGQKYIYTGSNDSSVYIYDLVSGDKVAVLKHHSSPVR 447
>At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1218
Score = 33.1 bits (72), Expect = 0.16
Identities = 23/101 (22%), Positives = 36/101 (35%)
Frame = +2
Query: 143 PSKDYIVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETIAXXXXXXXXX 322
P+ IV+G D VK+W K + TL GH V SV + I
Sbjct: 214 PTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIR 273
Query: 323 XXXXXXGQKIREIQTDSSDMWKIVFSPDGSQVATGGHTGKV 445
I+ + + W + P+ + +A G G +
Sbjct: 274 VWDATKRTGIQTFRREHDRFWILAVHPEINLLAAGHDNGMI 314
Score = 29.1 bits (62), Expect = 2.6
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2
Query: 146 SKDYIVTGGLDNLVKVWSYENNKLELLHTLEGH 244
S+ V+GG D +KVW+Y+ ++ L TL GH
Sbjct: 62 SQPLFVSGGDDYKIKVWNYKTHR--CLFTLLGH 92
>At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1216
Score = 33.1 bits (72), Expect = 0.16
Identities = 22/101 (21%), Positives = 37/101 (36%)
Frame = +2
Query: 143 PSKDYIVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETIAXXXXXXXXX 322
P+ IV+G D VK+W K + TL GH V SV + I
Sbjct: 214 PTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIR 273
Query: 323 XXXXXXGQKIREIQTDSSDMWKIVFSPDGSQVATGGHTGKV 445
++ + + W + P+ + +A G +G +
Sbjct: 274 VWDATKRTGLQTFRREHDRFWILAVHPEMNLLAAGHDSGMI 314
Score = 31.5 bits (68), Expect = 0.49
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +2
Query: 146 SKDYIVTGGLDNLVKVWSYENNKLELLHTLEGH 244
S+ V+GG D +KVW+Y+N++ L TL GH
Sbjct: 62 SQPLFVSGGDDYKIKVWNYKNHR--CLFTLLGH 92
>At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); rab11 binding protein, Bos
taurus, EMBL:AF117897
Length = 905
Score = 32.7 bits (71), Expect = 0.21
Identities = 15/46 (32%), Positives = 29/46 (63%)
Frame = +2
Query: 149 KDYIVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGE 286
+DY ++G LD +++W+ N ++ + L+ EM V +V +PDG+
Sbjct: 572 EDYFISGSLDAKIRIWNISNRQVVEWNDLK--EM-VTAVCYTPDGQ 614
Score = 27.5 bits (58), Expect = 7.9
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +2
Query: 353 REIQTDSSDMWKIVFSPDGSQVATGGHTGKVTVYGI 460
+EIQ +W + FSPD +A+ G + V+ +
Sbjct: 405 QEIQAHQGGIWTMKFSPDSHLLASAGEDCAIHVWEV 440
>At4g30510.2 68417.m04332 transport protein-related weak similarity
to Gsa12p [Pichia pastoris] GI:18307769; contains 1
WD-40 repeat (PF00400); similar to several hypothetical
proteins
Length = 261
Score = 32.7 bits (71), Expect = 0.21
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Frame = +2
Query: 395 FSP--DGSQVATGGHT--GKVTVYGIINGTVDKVLDTRGKFIMSVAWSPDGRYIASGAEG 562
FSP +G +A T G V VY +++ +D + ++A S +G YIA+G+E
Sbjct: 101 FSPSLEGCYLAVPASTTKGSVLVYNVMDLQSHSEIDAHRSPLAAIALSSNGMYIATGSEQ 160
Query: 563 GSV 571
G++
Sbjct: 161 GTL 163
>At4g30510.1 68417.m04331 transport protein-related weak similarity
to Gsa12p [Pichia pastoris] GI:18307769; contains 1
WD-40 repeat (PF00400); similar to several hypothetical
proteins
Length = 312
Score = 32.7 bits (71), Expect = 0.21
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Frame = +2
Query: 395 FSP--DGSQVATGGHT--GKVTVYGIINGTVDKVLDTRGKFIMSVAWSPDGRYIASGAEG 562
FSP +G +A T G V VY +++ +D + ++A S +G YIA+G+E
Sbjct: 88 FSPSLEGCYLAVPASTTKGSVLVYNVMDLQSHSEIDAHRSPLAAIALSSNGMYIATGSEQ 147
Query: 563 GSV 571
G++
Sbjct: 148 GTL 150
>At1g10580.1 68414.m01192 transducin family protein / WD-40 repeat
family protein similar to splicing factor hPRP17
(gi|3283220); contains 7 WD-40 repeats (PF00400);similar
to ESTs emb|F15435 and dbj|AUO62661
Length = 573
Score = 32.7 bits (71), Expect = 0.21
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 503 FIMSVAWSPDGRYIASGAEGGSVYLFDVSQGKMLHTIEAH 622
+ V +SPDGR++ SG G + +D K+ T++ H
Sbjct: 504 YACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCH 543
>At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8
WD-40 repeats (PF00400) (2 weak)
Length = 1108
Score = 32.3 bits (70), Expect = 0.28
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +2
Query: 158 IVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSV 265
++T G D L+KVW K T EGH+ PV S+
Sbjct: 469 VITCGDDKLIKVWDVSGRK---HFTFEGHDAPVYSI 501
Score = 27.9 bits (59), Expect = 6.0
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = +2
Query: 506 IMSVAWSPDGRYIASGAEGGSVYLFDVSQGKML--HT-IEAHAQAV 634
+ VAWSPDG +I + L+ S L HT I+AH AV
Sbjct: 410 VTRVAWSPDGNFIGVAFTKHLIQLYAFSGPNDLRQHTEIDAHVGAV 455
>At5g19920.1 68418.m02370 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to TipD protein (SP:O15736, PIR:T08602)
[Dictyostelium discoideum]; related to WD-repeat protein
RBAP1 (GI:9716495) [Zea mays]
Length = 656
Score = 31.9 bits (69), Expect = 0.37
Identities = 10/27 (37%), Positives = 21/27 (77%)
Frame = +2
Query: 506 IMSVAWSPDGRYIASGAEGGSVYLFDV 586
+++ +WSPDG +I+SG+ +++FD+
Sbjct: 585 LINQSWSPDGLHISSGSADPVIHIFDI 611
>At2g47990.1 68415.m06006 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 5 WD-40 repeats (PF00400); similar to beta
transducin-like protein HET-E2C*4
(GP:17225206)[Podospora anserina]
Length = 530
Score = 31.9 bits (69), Expect = 0.37
Identities = 35/145 (24%), Positives = 56/145 (38%), Gaps = 6/145 (4%)
Frame = +2
Query: 158 IVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETIAXXXXXXXXXXXXXX 337
+VTG D+ VKVW + + + H +PV V P G IA
Sbjct: 194 LVTGSYDHTVKVWDARVHTSNWIAEI-NHGLPVEDVVYLPSGGLIATAGGNSVKVWDLIG 252
Query: 338 XGQKIREIQTDSSDMWKI-VFSPDGSQ-----VATGGHTGKVTVYGIINGTVDKVLDTRG 499
G+ + +++ + + + V + ++ VA G+ KV YG T
Sbjct: 253 GGKMVCSMESHNKTVTSLRVARMESAESRLVSVALDGYM-KVFDYGRAKVTYSMRFPAP- 310
Query: 500 KFIMSVAWSPDGRYIASGAEGGSVY 574
+MS+ SPDG G G V+
Sbjct: 311 --LMSLGLSPDGSTRVIGGSNGMVF 333
>At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 31.9 bits (69), Expect = 0.37
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 473 VDKVLDTRGKFIMSVAWSPDGRYIASGAEGGSVYLFDVSQGKMLHTIE 616
+D+ I+++ +SPDG+YIAS E V ++ +++ + T E
Sbjct: 210 IDQEFSAHDGSILAMKFSPDGKYIASAGEDCVVRVWSITEEERTDTYE 257
>At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 31.9 bits (69), Expect = 0.37
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 473 VDKVLDTRGKFIMSVAWSPDGRYIASGAEGGSVYLFDVSQGKMLHTIE 616
+D+ I+++ +SPDG+YIAS E V ++ +++ + T E
Sbjct: 210 IDQEFSAHDGSILAMKFSPDGKYIASAGEDCVVRVWSITEEERTDTYE 257
>At1g49540.1 68414.m05553 transducin family protein / WD-40 repeat
family protein similar to signal transducer and
activator of transcription interacting protein 1
(GI:15929722) {Mus musculus}; similar to hypothetical
protein GB:AAD43147 GI:5430747 from (Arabidopsis
thaliana); contains Pfam PF00400: WD domain, G-beta
repeat (11 copies, 2 weak)
Length = 840
Score = 31.9 bits (69), Expect = 0.37
Identities = 16/51 (31%), Positives = 23/51 (45%)
Frame = +2
Query: 59 LLKKENAHEDLIYGCAWANINHSTDSKGPSKDYIVTGGLDNLVKVWSYENN 211
L+ K AH+ +I+ C+W H T D VK+WS EN+
Sbjct: 688 LMAKVEAHKRIIWACSWNPFGHQ----------FATSSRDKTVKIWSVEND 728
>At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1
protein (ZFWD1) identical to zfwd1 protein (GI:12057164)
[Arabidopsis thaliana]
Length = 430
Score = 31.5 bits (68), Expect = 0.49
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +2
Query: 158 IVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSV 265
+ +G +DN +KVWS +N L+ + TL H V+S+
Sbjct: 280 LYSGAMDNSIKVWSLDN--LQCIQTLTEHTSVVMSL 313
>At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 883
Score = 31.5 bits (68), Expect = 0.49
Identities = 16/64 (25%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +2
Query: 347 KIREIQTDSSDMWKIVFSPDGSQVATGGHTGKVTVYGIINGTV--DKVLDTRGKFIMSVA 520
K +EIQ + +W I FS DG +A+ G + ++ ++ + +LD +++
Sbjct: 405 KTQEIQAHNGSIWSIKFSLDGKYLASAGEDCIIHIWQVVEAEKKGELLLDRPELLLLATN 464
Query: 521 WSPD 532
SP+
Sbjct: 465 GSPE 468
>At5g05970.1 68418.m00661 transducin family protein / WD-40 repeat
family protein contains similarity to regulatory protein
Nedd1; contains Pfam PF00400: WD domain, G-beta repeat
(6 copies, 2 weak)|19804256|gb|AV785466.1|AV785466
Length = 781
Score = 31.1 bits (67), Expect = 0.65
Identities = 33/148 (22%), Positives = 59/148 (39%), Gaps = 5/148 (3%)
Frame = +2
Query: 155 YIVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETIAXXXXXXXXXXXXX 334
YI +GG +VK+W + KL + L+GH + V + E +A
Sbjct: 107 YICSGGTGQIVKIWDLQ-RKL-CIKKLKGHTSTITGVMYNCKDEHLASVSVGGDLIVHNL 164
Query: 335 XXGQKIREIQTDSSDMWKIVFSPDGSQ--VATGGHTGKVTVYGIINGTVDKV--LDTRGK 502
G + E++ + + +++ S+ + T G G V ++ G K+ L
Sbjct: 165 ASGARATELKDPNGQVLRLLDYSRSSRHLLVTAGDDGTVHLWD-TTGRSPKMSWLKQHSA 223
Query: 503 FIMSVAWSPDG-RYIASGAEGGSVYLFD 583
V +SP + IAS +Y +D
Sbjct: 224 PTAGVCFSPSNEKIIASVGMDKKLYTYD 251
>At3g27640.1 68416.m03452 transducin family protein / WD-40 repeat
family protein contains seven WD-40 G-protein beta
repeats; similar to RA-regulated nuclear
matrix-associated protein (GI:14161320) {Homo sapiens}
Length = 535
Score = 31.1 bits (67), Expect = 0.65
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 503 FIMSVAWSPDGRYIASGAEGGSVYLFDVSQ 592
F + SPDG Y+ SG+ G+ Y++ V++
Sbjct: 340 FFVRTMISPDGEYVLSGSSDGNAYIWQVNK 369
>At2g26490.1 68415.m03178 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
related to En/Spm transposon family of maize
Length = 465
Score = 31.1 bits (67), Expect = 0.65
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +2
Query: 158 IVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGE 286
+ +G D + VW + N L L GH PV +AV D E
Sbjct: 351 VFSGSADKTICVWKRDGNIHTCLSVLTGHTGPVKCLAVEADRE 393
Score = 27.5 bits (58), Expect = 7.9
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Frame = +2
Query: 158 IVTGGLDNLVKVWSYEN----NKLELLHTLEGHEMPVVSVAVSPDGETI 292
+ +G D VK W + K L+ TL E V ++AVS +G +
Sbjct: 262 VFSGSADGTVKAWKRDQQGKYTKHTLMQTLTKQESAVTALAVSKNGAAV 310
>At1g04510.1 68414.m00442 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 523
Score = 31.1 bits (67), Expect = 0.65
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +2
Query: 146 SKDYIVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETI 292
SKD I TGG+D + ++ ++L TL GH V S+ D + +
Sbjct: 233 SKDVIATGGIDTTAVL--FDRPSGQILSTLTGHSKKVTSIKFVGDTDLV 279
>At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6
WD-40 repeats (PF0400); identical to WD-40 repeat
protein (SP:O22467) [Arabidopsis thaliana]
Length = 424
Score = 30.7 bits (66), Expect = 0.85
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +2
Query: 143 PSKDYIV-TGGLDNLVKVWSYENNKLEL-LHTLEGHEMPVVSVAVSPDGETI 292
P +++V TG D VK+ ++ KL LHT + H+ V V +P ETI
Sbjct: 283 PFNEWVVATGSTDKTVKL--FDLRKLSTALHTFDSHKEEVFQVGWNPKNETI 332
>At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 698
Score = 30.7 bits (66), Expect = 0.85
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = +2
Query: 506 IMSVAWSPDGRYIASGAEGGSVYLFDV 586
I+++ +SPDGRY+AS E G + ++ V
Sbjct: 254 ILAMKFSPDGRYLASAGEDGVLRVWSV 280
Score = 29.9 bits (64), Expect = 1.5
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +2
Query: 347 KIREIQTDSSDMWKIVFSPDGSQVATGGHTGKVTVYGII 463
K +EIQ + + FSPDG +A+ G G + V+ ++
Sbjct: 243 KGQEIQAHEGAILAMKFSPDGRYLASAGEDGVLRVWSVV 281
>At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 694
Score = 30.7 bits (66), Expect = 0.85
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = +2
Query: 506 IMSVAWSPDGRYIASGAEGGSVYLFDV 586
I+++ +SPDGRY+AS E G + ++ V
Sbjct: 254 ILAMKFSPDGRYLASAGEDGVLRVWSV 280
Score = 29.9 bits (64), Expect = 1.5
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +2
Query: 347 KIREIQTDSSDMWKIVFSPDGSQVATGGHTGKVTVYGII 463
K +EIQ + + FSPDG +A+ G G + V+ ++
Sbjct: 243 KGQEIQAHEGAILAMKFSPDGRYLASAGEDGVLRVWSVV 281
>At3g21060.1 68416.m02662 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Retinoblastoma-binding protein 5 (RBBP-5)
[Homo sapiens](RBQ-3)
Length = 547
Score = 30.7 bits (66), Expect = 0.85
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
Frame = +2
Query: 389 IVFSPDGSQVATGGHTGKVTVYGI-INGTVDKVLDTR-GKFIMSVAWSPDGRYIASGAEG 562
+ F+ GS +A G G ++ G ++ D I SV+WS G + A
Sbjct: 29 VAFNHRGSLLAAGCADGGCVIWDFETRGIAKEIRDNDCSAAITSVSWSKYGHRLLVSAAD 88
Query: 563 GSVYLFDVSQG-KMLHTI 613
S+ L+DVS G K+ TI
Sbjct: 89 KSLTLWDVSTGEKIARTI 106
Score = 28.3 bits (60), Expect = 4.5
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Frame = +2
Query: 353 REIQTDSSDM-WKI-VFSPDGSQVATGGHT-GKVTVYGIIN-GTVDKVLDTRGKFIMSVA 520
RE Q + M WK FS DG V G G+ +Y G + K+L+ + ++ +A
Sbjct: 284 REFQDSVTKMHWKAPCFSGDGEWVVGGSACKGEHKIYIWDRAGHLVKILEGPKEALIDLA 343
Query: 521 WSPDGRYIASGAEGGSVYLF 580
W P I S + G VY++
Sbjct: 344 WHPVHPIIVSVSLAGLVYIW 363
>At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6 WD-40
repeats (PF00400); similiar to rab11 binding protein
(GI:4512103) [Bos taurus]
Length = 903
Score = 30.7 bits (66), Expect = 0.85
Identities = 38/173 (21%), Positives = 75/173 (43%), Gaps = 15/173 (8%)
Frame = +2
Query: 149 KDYIVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGE--TIAXXXXXXXXX 322
++Y ++G LD +++WS ++ ++ + HEM V + +PDG+ I
Sbjct: 559 ENYFLSGSLDAKIRIWSIQDR--HVVEWSDLHEM-VTAACYTPDGQGALIGSHKGICRAY 615
Query: 323 XXXXXXGQKIREIQTDSSD-------MWKIVFSP-DGSQVATGGHTGKVTVYGIINGT-- 472
+ +I S+ + FSP + S+V ++ I++G+
Sbjct: 616 DTEDCKLSQTNQIDVQSNKKSQAKRKITSFQFSPVNPSEVLVTSADSRIR---ILDGSEV 672
Query: 473 VDKVLDTRGKFI-MSVAWSPDGRYIASGAEGGSVYLF--DVSQGKMLHTIEAH 622
+ K R +S ++S DG+YI +E VYL+ D + + T ++H
Sbjct: 673 IHKFKGFRNTCSQLSASYSQDGKYIICASEDSQVYLWKNDFHRTRSTLTTQSH 725
>At1g29320.1 68414.m03584 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to meiotic recombination protein REC14
(GI:11139242) [Homo sapiens]; similar to unknown protein
GI:13623493 [Homo sapiens]
Length = 468
Score = 30.7 bits (66), Expect = 0.85
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = +2
Query: 404 DGSQVATGGHTGKVTVYGIINGTVDKV-LDTRGKFIMSVAWSPDGRYIASGAEGGSVYLF 580
D + TG + +V +Y I + D R I S+A PDG I G + F
Sbjct: 227 DHRKFVTGTKSHQVRLYDISTQRRPVLSFDFRETAITSIAEDPDGHTIYVGNASADLASF 286
Query: 581 DVSQGKML 604
D+ GK+L
Sbjct: 287 DIRTGKLL 294
>At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 825
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +2
Query: 347 KIREIQTDSSDMWKIVFSPDGSQVATGGHTGKVTVYGII 463
K +EIQ +W I FS DG +A+ G + ++ ++
Sbjct: 355 KSQEIQAHKGSIWSIKFSLDGRYLASAGEDCVIQIWKVV 393
>At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2
protein (ZFWD2), putative 99.8% identical to zfwd2
protein (GI:12057166) [Arabidopsis thaliana]; contains 6
copies (2 weak) Pfam PF00400: WD domain, G-beta repeat;
contains Pfam PF00642: Zinc finger C-x8-C-x5-C-x3-H type
(and similar) domain
Length = 437
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +2
Query: 158 IVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSV 265
+ +G +D +KVWS +N L+ + TL H V+S+
Sbjct: 287 LYSGSMDKTIKVWSLDN--LQCIQTLTDHSSVVMSL 320
>At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5
WD-40 repeats (PF0400); similar to WD-40 repeat protein
MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 496
Score = 30.3 bits (65), Expect = 1.1
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Frame = +2
Query: 122 HSTDSKGPSKDYIVTGGLDNLVKVWSYEN---NKL-ELLHTLEGHEMPVVSVAVSPDGET 289
H D + I+TG DN V+V+ N N + ++ EGH V+ V SPD +
Sbjct: 330 HCVDWNPHDNNLILTGSADNTVRVFDRRNLTSNGVGSPVYKFEGHRAAVLCVQWSPDKSS 389
Query: 290 I 292
+
Sbjct: 390 V 390
>At4g07410.1 68417.m01136 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400) (2
weak); similar to Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 815
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +2
Query: 509 MSVAWSPDGRYIASGAEGGSVYLFDVSQGKMLHTIEA 619
+SV WSPD + I SG+ G + +D + ++ I A
Sbjct: 202 LSVTWSPDAKRIFSGSSDGLIRCWDATSCHEVYRITA 238
>At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to SP|P87051
Peptidyl-prolyl cis-trans isomerase cyp2 (EC 5.2.1.8)
(Cyclophilin cyp2) {Schizosaccharomyces pombe}; contains
Pfam profiles PF00160: peptidyl-prolyl cis-trans
isomerase cyclophilin-type, PF00400: WD domain G-beta
repeat
Length = 631
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = +2
Query: 152 DYIVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDG 283
++ ++G +D +K W + +E H P+ +AVS DG
Sbjct: 82 EFFISGSMDGHLKFWKKKGVGIEFAKHFRSHLGPIEGLAVSIDG 125
>At2g30050.1 68415.m03654 transducin family protein / WD-40 repeat
family protein similar to SEC13-related protein
(SP:P55735) [Homo sapiens]
Length = 302
Score = 30.3 bits (65), Expect = 1.1
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +2
Query: 158 IVTGGLDNLVKVWSYENN--KLELLHTLEGHEMPVVSVAVSPD 280
+ +GG DN VKVW N K++ L+ H V VA +P+
Sbjct: 179 LASGGCDNTVKVWKLANGSWKMDCFPALQKHTDWVRDVAWAPN 221
>At2g01470.1 68415.m00070 St12p protein (ST12p) / SEC12p protein,
putative 99.8% identical to St12p protein (GI:166878)
{Arabidopsis thaliana}
Length = 393
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/40 (32%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Frame = +2
Query: 509 MSVAWSPDGRYIASGAEGGSVYLFD-VSQGKMLHTIEAHA 625
+++A++P+G +A+GAE G++ +F S +L+ +AH+
Sbjct: 157 LALAFNPEGSVLAAGAEDGTLRVFKWPSMNTLLNESQAHS 196
>At5g60940.2 68418.m07645 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 337
Score = 29.9 bits (64), Expect = 1.5
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +2
Query: 479 KVLDTRGKFIMSVAWSPDGRYIASGAEGGSVYLFDVSQGKMLHTIEAHAQ 628
K L + +SPDG + A+G S+ LF+V + K + + + A+
Sbjct: 25 KTLSEHKSVVRCARFSPDGMFFATGGADTSIKLFEVPKVKQMISGDTQAR 74
>At5g60940.1 68418.m07644 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 429
Score = 29.9 bits (64), Expect = 1.5
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +2
Query: 479 KVLDTRGKFIMSVAWSPDGRYIASGAEGGSVYLFDVSQGKMLHTIEAHAQ 628
K L + +SPDG + A+G S+ LF+V + K + + + A+
Sbjct: 117 KTLSEHKSVVRCARFSPDGMFFATGGADTSIKLFEVPKVKQMISGDTQAR 166
>At5g56130.1 68418.m07002 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to beta transducin-like protein HET-E2C*4
(GI:17225206) [Podospora anserina]
Length = 315
Score = 29.9 bits (64), Expect = 1.5
Identities = 18/79 (22%), Positives = 35/79 (44%)
Frame = +2
Query: 389 IVFSPDGSQVATGGHTGKVTVYGIINGTVDKVLDTRGKFIMSVAWSPDGRYIASGAEGGS 568
I P G A G V+++ I + + + +++++ G YIAS +E
Sbjct: 197 IAIDPKGRYFAVGSADSLVSLWDISDMLCLRTFTKLEWPVRTISFNYSGEYIASASEDLF 256
Query: 569 VYLFDVSQGKMLHTIEAHA 625
+ + +V G+ +H I A
Sbjct: 257 IDIANVQTGRTVHQIPCRA 275
>At5g27640.1 68418.m03311 eukaryotic translation initiation factor 3
subunit 9 / eIF-3 eta / eIF3b (TIF3B1) nearly identical
to SP|Q9C5Z1 Eukaryotic translation initiation factor 3
subunit 9 (eIF-3 eta) (eIF3 p110) (eIF3b) {Arabidopsis
thaliana}
Length = 712
Score = 29.9 bits (64), Expect = 1.5
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = +2
Query: 467 GTVDKVLDTRGKFIMSVAWSPDGRY-IASGAEG--GSVYLFDVSQGKMLHTIE 616
G V K+ + K ++ WSP G+Y I +G +G G + F+V + + + T E
Sbjct: 499 GRVSKLATLKAKQANALFWSPTGKYIILAGLKGFNGQLEFFNVDELETMATAE 551
>At5g25780.1 68418.m03060 eukaryotic translation initiation factor 3
subunit 9, putative / eIF-3 eta, putative / eIF3b,
putative nearly identical to SP|Q9C5Z1 Eukaryotic
translation initiation factor 3 subunit 9 (eIF-3 eta)
(eIF3 p110) (eIF3b) {Arabidopsis thaliana}
Length = 714
Score = 29.9 bits (64), Expect = 1.5
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = +2
Query: 467 GTVDKVLDTRGKFIMSVAWSPDGRY-IASGAEG--GSVYLFDVSQGKMLHTIE 616
G V K+ + K ++ WSP G+Y I +G +G G + F+V + + + T E
Sbjct: 500 GRVSKLATLKAKQANALFWSPTGKYIILAGLKGFNGQLEFFNVDELETMATAE 552
>At5g23730.1 68418.m02782 transducin family protein / WD-40 repeat
family protein contains similarity to photomorphogenesis
repressor protein; contains Pfam PF00400: WD domain,
G-beta repeat (5 copies)
Length = 243
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2
Query: 158 IVTGGLDNLVKVWSYENNKLELLHTLEGH 244
+VT G D +K+WS E+ + ++ T EGH
Sbjct: 127 VVTAGTDGCLKLWSVEDGR--VIRTYEGH 153
>At4g05410.1 68417.m00823 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); U3
snoRNP-associated 55-kDa protein, Homo sapiens,
gb:NP_004695; Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) [Podospora anserina]
Length = 504
Score = 29.9 bits (64), Expect = 1.5
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +2
Query: 509 MSVAWSPDGRYIASGAEGGSVYLFDVSQGKMLHTIEAHAQAV 634
+++A S DGRY+A+G V+++DV + + H V
Sbjct: 226 LALAVSSDGRYLATGGVDRHVHIWDVRTREHVQAFPGHRNTV 267
>At1g80670.1 68414.m09466 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400) (1
weak); similar to Hypothetical RAE1-like
protein.(SP:Q38942) [Arabidopsis thaliana]; similar to
mRNA-associated protein mrnp 41 ((mRNA export protein)
(GB:AAC28126) (GI:1903456)(RAE1) (MRNP41) (SP:P78406)
[Homo sapiens]
Length = 349
Score = 29.9 bits (64), Expect = 1.5
Identities = 16/69 (23%), Positives = 34/69 (49%)
Frame = +2
Query: 404 DGSQVATGGHTGKVTVYGIINGTVDKVLDTRGKFIMSVAWSPDGRYIASGAEGGSVYLFD 583
DG+ V +GG + ++ +++G + I ++AW P +A+G+ ++ +D
Sbjct: 83 DGTTVFSGGCDKQAKMWPLLSGGQPVTVAMHEGPIAAMAWIPGMNLLATGSWDKTLKYWD 142
Query: 584 VSQGKMLHT 610
Q +HT
Sbjct: 143 TRQQNPVHT 151
>At1g52730.2 68414.m05959 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 29.9 bits (64), Expect = 1.5
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Frame = +2
Query: 395 FSPDGSQVATGGHTGKVTVYGI--INGTVDKVLDTRGKFIMSVAW-SPDGRYIASGAEGG 565
FS D + TGG + V+ + ++ +V + G I ++ W D ++S + G
Sbjct: 110 FSEDTKSLLTGGFEKILRVFDMNRLDAPPTEVDKSPGS-IRTLTWLHSDQTILSSCTDIG 168
Query: 566 SVYLFDVSQGKMLHTIE 616
V L+DV GK++ T+E
Sbjct: 169 GVRLWDVRSGKIVQTLE 185
Score = 28.7 bits (61), Expect = 3.4
Identities = 30/137 (21%), Positives = 55/137 (40%), Gaps = 2/137 (1%)
Frame = +2
Query: 185 VKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETIAXXXXXXXXXXXXXXXGQKIREIQ 364
V++W + K+ + TLE + PV S VS DG I G ++
Sbjct: 170 VRLWDVRSGKI--VQTLET-KSPVTSAEVSQDGRYITTADGSTVKFWDANHFGL-VKSYD 225
Query: 365 TDSSDMWKIVFSPDGSQVATGGHTGKVTVYGIINGTVDKVLDTRGKF--IMSVAWSPDGR 538
+ + G + GG V V+ G +++ +G + V ++P G
Sbjct: 226 MPCNIESASLEPKSGEKFVAGGEDMWVRVFDFYTG--EEIGCNKGHHGPVHCVRFTPTGL 283
Query: 539 YIASGAEGGSVYLFDVS 589
ASG+E G++ ++ +
Sbjct: 284 SYASGSEDGTIRIWQTT 300
>At1g52730.1 68414.m05958 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 29.9 bits (64), Expect = 1.5
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Frame = +2
Query: 395 FSPDGSQVATGGHTGKVTVYGI--INGTVDKVLDTRGKFIMSVAW-SPDGRYIASGAEGG 565
FS D + TGG + V+ + ++ +V + G I ++ W D ++S + G
Sbjct: 110 FSEDTKSLLTGGFEKILRVFDMNRLDAPPTEVDKSPGS-IRTLTWLHSDQTILSSCTDIG 168
Query: 566 SVYLFDVSQGKMLHTIE 616
V L+DV GK++ T+E
Sbjct: 169 GVRLWDVRSGKIVQTLE 185
Score = 28.7 bits (61), Expect = 3.4
Identities = 30/137 (21%), Positives = 55/137 (40%), Gaps = 2/137 (1%)
Frame = +2
Query: 185 VKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETIAXXXXXXXXXXXXXXXGQKIREIQ 364
V++W + K+ + TLE + PV S VS DG I G ++
Sbjct: 170 VRLWDVRSGKI--VQTLET-KSPVTSAEVSQDGRYITTADGSTVKFWDANHFGL-VKSYD 225
Query: 365 TDSSDMWKIVFSPDGSQVATGGHTGKVTVYGIINGTVDKVLDTRGKF--IMSVAWSPDGR 538
+ + G + GG V V+ G +++ +G + V ++P G
Sbjct: 226 MPCNIESASLEPKSGEKFVAGGEDMWVRVFDFYTG--EEIGCNKGHHGPVHCVRFTPTGL 283
Query: 539 YIASGAEGGSVYLFDVS 589
ASG+E G++ ++ +
Sbjct: 284 SYASGSEDGTIRIWQTT 300
>At1g24530.1 68414.m03088 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 7 WD-40 repeats (PF00400)
Length = 418
Score = 29.9 bits (64), Expect = 1.5
Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +2
Query: 158 IVTGGLDNLVKVWSYENNKLE--LLHTLEGHEMPVVSVAVSPDGETI 292
+ TG D ++VW+ + L+ TLE H+ V ++A++ DG +
Sbjct: 249 VYTGSADRRIRVWAKPTGEKRHTLVATLEKHKSAVNALALNDDGSVL 295
>At5g10940.1 68418.m01269 transducin family protein / WD-40 repeat
family protein unnamed ORF cDNA FLJ10872, Homo sapiens,
EMBL:AK001734; contains Pfam PF00400: WD domain, G-beta
repeat (6 copies,1 weak)
Length = 757
Score = 29.5 bits (63), Expect = 2.0
Identities = 10/37 (27%), Positives = 25/37 (67%)
Frame = +2
Query: 506 IMSVAWSPDGRYIASGAEGGSVYLFDVSQGKMLHTIE 616
+ ++AW+ +G + SG++ + +++ S K+LH+I+
Sbjct: 53 VNALAWNSNGSLLISGSDDLRINIWNYSSRKLLHSID 89
>At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 347
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/53 (26%), Positives = 24/53 (45%)
Frame = +2
Query: 125 STDSKGPSKDYIVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDG 283
S G + ++ ++G D+ ++W + T GHE V +V PDG
Sbjct: 209 SVSISGSNPNWFISGSCDSTARLWDTRAAS-RAVRTFHGHEGDVNTVKFFPDG 260
Score = 29.5 bits (63), Expect = 2.0
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +2
Query: 506 IMSVAWSPDGRYIASGAEGGSVYLFDVSQGKMLHTIEAH 622
+ +V + PDG +G++ G+ L+D+ G L + H
Sbjct: 251 VNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPH 289
>At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 315
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/53 (26%), Positives = 24/53 (45%)
Frame = +2
Query: 125 STDSKGPSKDYIVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDG 283
S G + ++ ++G D+ ++W + T GHE V +V PDG
Sbjct: 147 SVSISGSNPNWFISGSCDSTARLWDTRAAS-RAVRTFHGHEGDVNTVKFFPDG 198
Score = 29.5 bits (63), Expect = 2.0
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +2
Query: 506 IMSVAWSPDGRYIASGAEGGSVYLFDVSQGKMLHTIEAH 622
+ +V + PDG +G++ G+ L+D+ G L + H
Sbjct: 189 VNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPH 227
>At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 377
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/53 (26%), Positives = 24/53 (45%)
Frame = +2
Query: 125 STDSKGPSKDYIVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDG 283
S G + ++ ++G D+ ++W + T GHE V +V PDG
Sbjct: 209 SVSISGSNPNWFISGSCDSTARLWDTRAAS-RAVRTFHGHEGDVNTVKFFPDG 260
Score = 29.5 bits (63), Expect = 2.0
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +2
Query: 506 IMSVAWSPDGRYIASGAEGGSVYLFDVSQGKMLHTIEAH 622
+ +V + PDG +G++ G+ L+D+ G L + H
Sbjct: 251 VNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPH 289
>At3g01340.1 68416.m00051 protein transport protein SEC13 family
protein / WD-40 repeat family protein similar to Protein
transport protein SEC13 SP|Q04491 {Saccharomyces
cerevisiae} and SEC13 (SP:P53024) [Pichia pastoris]
Length = 302
Score = 29.5 bits (63), Expect = 2.0
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +2
Query: 158 IVTGGLDNLVKVWSYENN--KLELLHTLEGHEMPVVSVAVSPD 280
+ +GG D+ VKVW + N K++ L H V VA +P+
Sbjct: 179 LASGGCDSTVKVWKFSNGSWKMDCFPALNKHTDWVRDVAWAPN 221
>At2g40360.1 68415.m04977 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to block of proliferation protein Bop1
(GI:1679772) [Mus musculus]
Length = 753
Score = 29.5 bits (63), Expect = 2.0
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +2
Query: 506 IMSVAWSPDGRYIASGAEGGSVYLFDVSQGKML 604
+ S++ G +IASG+ GSV +++V G+ L
Sbjct: 426 VTSISTDSSGEWIASGSTDGSVRMWEVETGRCL 458
Score = 28.3 bits (60), Expect = 4.5
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = +2
Query: 443 VTVYGIIN-GTVDKVLDTRGKFIMSVAWSPDGRYIASGAEGGSVYLFDVS-QGKMLHTIE 616
V VY ++ G K L+T + I S+A P G + G++ G + FD+ K T++
Sbjct: 609 VRVYNLLKPGEATKKLETGLREISSMAIHPGGDNLIVGSKEGKMCWFDMDLSSKPYKTLK 668
Query: 617 AHAQAV 634
H + +
Sbjct: 669 NHPKDI 674
Score = 28.3 bits (60), Expect = 4.5
Identities = 18/81 (22%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Frame = +2
Query: 341 GQKIREIQTDSSDMWKIVFSPDGSQVATGGHTGKVTVYGI-INGTVDKVLDTRGKFIMSV 517
G+ ++++T ++ + P G + G GK+ + + ++ K L K I +V
Sbjct: 618 GEATKKLETGLREISSMAIHPGGDNLIVGSKEGKMCWFDMDLSSKPYKTLKNHPKDITNV 677
Query: 518 AWSPDGRYIASGAEGGSVYLF 580
A AS +E + Y+F
Sbjct: 678 AVHRSYPLFASCSEDSTAYVF 698
>At2g16405.1 68415.m01878 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD-repeat protein 13 (SP:Q9H1Z4) [Homo
sapiens]
Length = 482
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +2
Query: 152 DYIVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVA 268
+YIV G D+ V + K ++ L+GH PV+ VA
Sbjct: 417 EYIVAGSEDSNVYFYDLTKPKHTCVNKLQGHRFPVMCVA 455
>At5g48100.1 68418.m05942 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661197]
Length = 565
Score = 29.1 bits (62), Expect = 2.6
Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Frame = +2
Query: 74 NAHEDLIYGCAWANINHSTDSKGPSKDYIVTGGLDNLVKVWSYENNKLELLHTLEGHEMP 253
N H +Y C+ ++ H T KG + + NL ++ N+ L ++ + +GH +
Sbjct: 190 NGHPGFLYPCSKSDTFHLTVEKGKTYRIRMVNAAMNLPLFFAIANHSLTVV-SADGHYIK 248
Query: 254 VVS---VAVSPDGETI 292
+ + +SP GET+
Sbjct: 249 PIKATYITISP-GETL 263
>At3g15610.1 68416.m01980 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to serine/threonine kinase receptor associated
protein GB:NP_035629 (SP:Q9Z1Z2) [Mus musculus];
UNR-interacting protein GB:NP_009109 [Homo sapiens]
Length = 341
Score = 29.1 bits (62), Expect = 2.6
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Frame = +2
Query: 395 FSPDGSQVATGGHTGKVTVYGIINGTVDKV-LDTRGKFIMSVAW-SPDGRYIASGAEGGS 568
FS D + TGG + V+ + +D I ++ W D ++S + G
Sbjct: 110 FSQDTKYLITGGFEKILRVFDLNRLDAPPTEIDKSPGSIRTLTWLHGDQTILSSCTDIGG 169
Query: 569 VYLFDVSQGKMLHTIE 616
V L+DV GK++ T+E
Sbjct: 170 VRLWDVRSGKIVQTLE 185
>At4g18905.1 68417.m02787 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 494
Score = 28.7 bits (61), Expect = 3.4
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +2
Query: 158 IVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPD 280
+ TG +D VK+W NN+ + T + + V S++ + D
Sbjct: 420 LATGSMDKSVKLWDLSNNEPSCIATHQPNAGAVFSISFAVD 460
>At4g18900.1 68417.m02786 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 461
Score = 28.7 bits (61), Expect = 3.4
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +2
Query: 158 IVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPD 280
+ TG D VK+W NN+ + T + + +A SPD
Sbjct: 385 LATGSKDRTVKLWDLSNNEPSCIATHNPNAGGLFFIAFSPD 425
>At2g21920.1 68415.m02604 hypothetical protein
Length = 278
Score = 28.7 bits (61), Expect = 3.4
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = +2
Query: 41 NTIHSILLKKENAHEDLIYGCAWANINHSTD 133
N +S++LK N D + W+ + HS D
Sbjct: 219 NDSYSVILKSRNTTNDFVLASGWSIMKHSLD 249
>At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 (4
significant) WD-40 repeats (PF0400); identical to WD-40
repeat protein MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 507
Score = 28.7 bits (61), Expect = 3.4
Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Frame = +2
Query: 122 HSTDSKGPSKDYIVTGGLDNLVKVWSYE----NNKLELLHTLEGHEMPVVSVAVSPDGET 289
H D + I+TG DN V+++ N ++ EGH+ V+ V SPD +
Sbjct: 341 HCVDWNPHDDNLILTGSADNTVRLFDRRKLTANGVGSPIYKFEGHKAAVLCVQWSPDKSS 400
Query: 290 I 292
+
Sbjct: 401 V 401
>At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4
protein (ZFWD4) contains 6 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd4 protein (GI:12057170)
[Arabidopsis thaliana]
Length = 419
Score = 28.3 bits (60), Expect = 4.5
Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +2
Query: 158 IVTGGLDNLVKVWSY-ENNKLELLHTLEGHEMPVVSVAVSPDGE 286
+++ LD +KVW+Y EN L+++ T + V +++ D E
Sbjct: 311 LISSSLDGTIKVWAYSENGILKVVQTRRQEQSSVHALSGMHDAE 354
>At2g19260.1 68415.m02248 ELM2 domain-containing protein / PHD
finger family protein contains Pfam profiles: PF01448
ELM2 domain, PF00628 PHD-finger
Length = 631
Score = 28.3 bits (60), Expect = 4.5
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -3
Query: 339 SKRSHMISEESRDVLAIVSPSGLTATDTTGISCPSRVC 226
S + S +SR+ S SG++ TDT G S P R C
Sbjct: 375 SSEVNSTSSKSREDDCYSSDSGVSETDTDGSSSPFRQC 412
>At1g12910.1 68414.m01499 flower pigmentation protein (AN11)
contains 3 WD-40 repeats (PF00400); identical to
GB:AAC18912 from [Arabidopsis thaliana] (Genes Dev. 11
(11), 1422-1434 (1997))
Length = 346
Score = 28.3 bits (60), Expect = 4.5
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +2
Query: 413 QVATGGHTGKVTVYGIINGTVDKVLDTRGKFIMSVAWSPDGRYIASGAEGGSVYLFDV 586
++ T T++ I VD L K + +AW G + AS + GSV +FD+
Sbjct: 150 RIGTSSTDTTCTIWDIEREAVDTQLIAHDKEVFDIAWGGVGVF-ASVSADGSVRVFDL 206
>At5g14530.1 68418.m01703 transducin family protein / WD-40 repeat
family protein similar to Will die slowly protein
(SP:Q9V3J8) [Drosophila melanogaster] ; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies, 1 weak)
Length = 330
Score = 27.9 bits (59), Expect = 6.0
Identities = 18/65 (27%), Positives = 28/65 (43%)
Frame = +2
Query: 389 IVFSPDGSQVATGGHTGKVTVYGIINGTVDKVLDTRGKFIMSVAWSPDGRYIASGAEGGS 568
+ SP +G V ++ + +L RG+ +VA+ G A EGG+
Sbjct: 120 LCMSPINDSFMSGSLDRSVRLWDLRVNACQGILHLRGR--PAVAYDQQGLVFAIAMEGGA 177
Query: 569 VYLFD 583
V LFD
Sbjct: 178 VKLFD 182
>At4g40050.1 68417.m05671 expressed protein
Length = 599
Score = 27.9 bits (59), Expect = 6.0
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -1
Query: 638 SGRPARGPLSCAASSLGSRRTSKPNRLQRRS 546
SG PAR ++ +S+GS RTSK L R S
Sbjct: 334 SGGPARENVAQPENSVGSSRTSKSKLLARAS 364
>At2g34260.1 68415.m04191 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 353
Score = 27.9 bits (59), Expect = 6.0
Identities = 18/90 (20%), Positives = 34/90 (37%)
Frame = +2
Query: 353 REIQTDSSDMWKIVFSPDGSQVATGGHTGKVTVYGIINGTVDKVLDTRGKFIMSVAWSPD 532
R+++ + F DG ++ T + + G L+ + ++ +
Sbjct: 45 RKVRAHKESCRAVRFIDDGQRIVTASADCSILATDVETGAQVAHLENAHEDAVNTLINVT 104
Query: 533 GRYIASGAEGGSVYLFDVSQGKMLHTIEAH 622
IASG + G V ++D Q H AH
Sbjct: 105 ETTIASGDDKGCVKIWDTRQRSCSHEFNAH 134
>At2g20330.1 68415.m02374 transducin family protein / WD-40 repeat
family protein similar to Transcriptional repressor
rco-1 (SP:P78706) [Neurospora crassa]; similar to
TUP1(GB:AF079369); contains 6 WD-40 repeats (PF00400)
Length = 648
Score = 27.9 bits (59), Expect = 6.0
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +2
Query: 506 IMSVAWSPDGRYIASGAEGGSVYLFDVSQG 595
+ + AW DG+ IA G GS+ ++ + G
Sbjct: 330 VTTCAWDRDGKRIAGGVGDGSIQIWSLKPG 359
>At1g48670.1 68414.m05447 auxin-responsive GH3 family protein
similar to auxin-responsive GH3 product [Glycine max]
GI:18591; contains Pfam profile PF03321: GH3
auxin-responsive promoter
Length = 525
Score = 27.9 bits (59), Expect = 6.0
Identities = 20/89 (22%), Positives = 40/89 (44%)
Frame = +2
Query: 11 AI*TYLKMPSNTIHSILLKKENAHEDLIYGCAWANINHSTDSKGPSKDYIVTGGLDNLVK 190
A+ T L+ P + + ++ ++E +H+ +W I K D I+TG + +
Sbjct: 203 AVSTILRGPDSILADVI-EQECSHK------SWEGIITRLWPKAKYIDCIITGQMSQYIP 255
Query: 191 VWSYENNKLELLHTLEGHEMPVVSVAVSP 277
+ + +NKL ++ T G + V P
Sbjct: 256 MLEFYSNKLPIVSTTYGSSESTFGMNVDP 284
>At1g27840.1 68414.m03412 transducin family protein / WD-40 repeat
family protein contains similarity to cockayne syndrome
complementation group A protein GB:U28413 GI:975301 from
[Homo sapiens]; confirmed by cDNA gi:1598289
Length = 450
Score = 27.9 bits (59), Expect = 6.0
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2
Query: 530 DGRYIASGAEGGSVYLFDVSQ 592
+GRY+ SGA GS +FDV +
Sbjct: 55 EGRYLLSGAADGSAAVFDVQR 75
>At1g19750.1 68414.m02469 transducin family protein / WD-40 repeat
family protein similar to Cockayne syndrome
complementaion group A proteins (GI:18077663)[Mus
musculus] and (SP:Q13216)[Homo sapiens]; confirmed by
full-length cDNA GI:15982896
Length = 450
Score = 27.9 bits (59), Expect = 6.0
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2
Query: 530 DGRYIASGAEGGSVYLFDVSQ 592
+GRY+ SGA GS +FDV +
Sbjct: 55 EGRYLLSGAADGSAAVFDVKR 75
>At4g30840.1 68417.m04375 WD-40 repeat protein family
Length = 361
Score = 27.5 bits (58), Expect = 7.9
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Frame = +2
Query: 404 DGSQVATGGHTGKVTVYGIING---TVDKVLDTRGKF-IMSVAWSPDGRYIASGAEGGSV 571
+G + T G G+V V I+NG KV D G +V W+ ++ +G G +
Sbjct: 144 EGGECVTVGEDGRVNVVKIVNGEGLRYRKVFDGNGLVAYRAVKWASPTEFV-TGGYGFGL 202
Query: 572 YLFD 583
L+D
Sbjct: 203 QLWD 206
>At4g21130.1 68417.m03055 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); some
similarity to a group of proteins with homology to
mammalian apoptosis regulators identified in zebrafish
(PUBMED:10917738)Apaf-1(gi:7677507)
Length = 537
Score = 27.5 bits (58), Expect = 7.9
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +2
Query: 509 MSVAWSPDGRYIASGAEGGSVYLFDV 586
+++A S DGRY+A+G V+L+D+
Sbjct: 210 LALAVSSDGRYLATGGVDCHVHLWDI 235
>At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP|O43684)[Homo sapiens]
Length = 340
Score = 27.5 bits (58), Expect = 7.9
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +2
Query: 164 TGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETIA 295
TGG D V +W N K L+ + + +++ S DG+ +A
Sbjct: 258 TGGCDGFVNIWDGNNKK--RLYQYSKYPTSISALSFSRDGQLLA 299
>At3g10530.1 68416.m01264 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400); BING4
(gi:3811380) {Mus musculus]; similar to hypothetical
protein GB:P40055 [Saccharomyces cerevisiae]
Length = 536
Score = 27.5 bits (58), Expect = 7.9
Identities = 21/99 (21%), Positives = 45/99 (45%), Gaps = 1/99 (1%)
Frame = +2
Query: 341 GQKIREIQTDSSDMWKIVFSPDGSQVATGGHTGKVTVYGIINGTVDKVLDTRGKFIMSVA 520
G + I+T + +P S V G G VT++ + + + SVA
Sbjct: 229 GGMVASIRTGKGRTDVMEVNPYNSVVGLGHSGGTVTMWKPTSQAPLVQMQCHPGPVSSVA 288
Query: 521 WSPDGRYIASGAEGGSVYLFDVSQGKMLHTIEA-HAQAV 634
+ P+G +A+ + + ++D+ + + + TI + HA+ +
Sbjct: 289 FHPNGHLMATSGKERKIKIWDLRKFEEVQTIHSFHAKTL 327
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,536,310
Number of Sequences: 28952
Number of extensions: 269468
Number of successful extensions: 1379
Number of sequences better than 10.0: 170
Number of HSP's better than 10.0 without gapping: 912
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1283
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1314848736
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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