Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0444
(486 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P61353 Cluster: 60S ribosomal protein L27; n=97; Eukary... 119 3e-26
UniRef50_P91914 Cluster: 60S ribosomal protein L27; n=14; Eukary... 113 3e-24
UniRef50_Q4P3X4 Cluster: 60S ribosomal protein L27; n=8; Dikarya... 100 2e-20
UniRef50_P0C2H7 Cluster: 60S ribosomal protein L27-B; n=39; Euka... 99 3e-20
UniRef50_Q4WJD7 Cluster: 60S ribosomal protein L27e; n=6; Pezizo... 97 2e-19
UniRef50_Q16PM4 Cluster: 60S ribosomal protein L27; n=1; Aedes a... 91 2e-17
UniRef50_Q6R7S0 Cluster: 60S ribosomal protein L27; n=7; Fungi/M... 85 8e-16
UniRef50_Q01A00 Cluster: RL27_PEA 60S ribosomal protein L27 pir|... 82 6e-15
UniRef50_Q86LP6 Cluster: 60S ribosomal protein L27; n=4; Trypano... 82 7e-15
UniRef50_Q4Q504 Cluster: 60S ribosomal protein L27; n=6; Trypano... 82 7e-15
UniRef50_Q55BE6 Cluster: 60S ribosomal protein L27; n=1; Dictyos... 75 6e-13
UniRef50_A0BCG5 Cluster: Chromosome undetermined scaffold_10, wh... 70 2e-11
UniRef50_A0C4W1 Cluster: 60S ribosomal protein L27; n=1; Paramec... 69 6e-11
UniRef50_Q5CSF1 Cluster: 60S ribosomal protein L27; n=2; Cryptos... 68 1e-10
UniRef50_UPI00006CAB39 Cluster: hypothetical protein TTHERM_0078... 67 2e-10
UniRef50_Q4N659 Cluster: 60S ribosomal protein L27e, putative; n... 62 6e-09
UniRef50_Q7RNR5 Cluster: 60S ribosomal protein L27 homolog; n=4;... 62 9e-09
UniRef50_UPI000049913D Cluster: 60S ribosomal protein L27; n=2; ... 60 3e-08
UniRef50_A5I8K6 Cluster: Putative uncharacterized protein; n=1; ... 59 6e-08
UniRef50_A2DNC1 Cluster: 60S ribosomal protein L27; n=3; Trichom... 59 6e-08
UniRef50_Q7QVA1 Cluster: 60S ribosomal protein L27; n=1; Giardia... 55 7e-07
UniRef50_UPI0000F2B958 Cluster: PREDICTED: similar to ribosomal ... 51 1e-05
UniRef50_Q98SC5 Cluster: 60S ribosomal protein L27; n=1; Guillar... 46 5e-04
UniRef50_Q8SS64 Cluster: 60S RIBOSOMAL PROTEIN L27; n=1; Encepha... 38 0.091
UniRef50_Q1DRV0 Cluster: 60S ribosomal protein L6; n=15; Pezizom... 37 0.28
UniRef50_Q54D63 Cluster: 60S ribosomal protein L6; n=2; Eukaryot... 36 0.64
UniRef50_Q02326 Cluster: 60S ribosomal protein L6-A; n=16; Dikar... 36 0.64
UniRef50_Q0VRK4 Cluster: Putative uncharacterized protein; n=1; ... 34 1.5
UniRef50_Q3LW52 Cluster: Ribosomal protein L27; n=1; Bigelowiell... 34 1.5
UniRef50_Q5B7I5 Cluster: Putative uncharacterized protein; n=1; ... 34 2.0
UniRef50_Q1YQZ7 Cluster: Short chain dehydrogenase family protei... 33 3.4
UniRef50_UPI0000D9DE6C Cluster: PREDICTED: similar to 60S riboso... 33 4.5
UniRef50_Q7XY83 Cluster: 60S ribosomal protein L6; n=1; Griffith... 33 4.5
UniRef50_Q01IK4 Cluster: 60S ribosomal protein L6; n=17; Eukaryo... 33 4.5
UniRef50_A1Z9C2 Cluster: CG17050-PA; n=1; Drosophila melanogaste... 33 4.5
UniRef50_A0CYT3 Cluster: 60S ribosomal protein L6; n=5; Oligohym... 33 4.5
UniRef50_Q9MTH5 Cluster: Putative membrane protein ycf1; n=3; Oe... 33 4.5
UniRef50_Q9C9C6 Cluster: 60S ribosomal protein L6-2; n=11; Eukar... 33 4.5
UniRef50_Q8ZYB4 Cluster: 50S ribosomal protein L14e; n=14; Archa... 33 4.5
UniRef50_UPI0000ECCEB7 Cluster: UPI0000ECCEB7 related cluster; n... 32 6.0
UniRef50_Q1R0D3 Cluster: Short-chain dehydrogenase/reductase SDR... 32 6.0
UniRef50_Q4N3I8 Cluster: 60S ribosomal protein L6e, putative; n=... 32 6.0
UniRef50_Q8PSL5 Cluster: Putative uncharacterized protein; n=1; ... 32 6.0
UniRef50_UPI00006CB01E Cluster: Kinesin motor domain containing ... 32 7.9
UniRef50_A5V0E5 Cluster: Polar amino acid ABC transporter, inner... 32 7.9
UniRef50_Q4Q4D3 Cluster: 60S ribosomal protein L6, putative; n=1... 32 7.9
UniRef50_Q7SH22 Cluster: 60S ribosomal protein L6; n=2; Sordaria... 32 7.9
>UniRef50_P61353 Cluster: 60S ribosomal protein L27; n=97;
Eukaryota|Rep: 60S ribosomal protein L27 - Homo sapiens
(Human)
Length = 136
Score = 119 bits (287), Expect = 3e-26
Identities = 58/87 (66%), Positives = 67/87 (77%), Gaps = 2/87 (2%)
Frame = +1
Query: 190 PRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSA-KDL-KDPAKRKK 363
PRKV MGK KI KRSKIK FVKV NYNHLMPTRY+VD +K KD+ +DPA ++K
Sbjct: 50 PRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRK 109
Query: 364 LRFNTRVRFEERYKSGKNKWFFQKLRF 444
R +V+FEERYK+GKNKWFFQKLRF
Sbjct: 110 ARREAKVKFEERYKTGKNKWFFQKLRF 136
Score = 96.7 bits (230), Expect = 2e-19
Identities = 44/71 (61%), Positives = 55/71 (77%)
Frame = +3
Query: 42 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPXESAQEDGKE 221
MGK MKPGKVVLVL+GRY+GRKA++VKN D+GTSD+PY HA VAGIDRYP + GK+
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 222 *NPQEVQDKAF 254
+ + K+F
Sbjct: 61 KIAKRSKIKSF 71
>UniRef50_P91914 Cluster: 60S ribosomal protein L27; n=14;
Eukaryota|Rep: 60S ribosomal protein L27 -
Caenorhabditis elegans
Length = 136
Score = 113 bits (271), Expect = 3e-24
Identities = 51/87 (58%), Positives = 67/87 (77%), Gaps = 2/87 (2%)
Frame = +1
Query: 190 PRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEK--FSAKDLKDPAKRKK 363
P KV K MGK KI KR+K+KPF+KVV+Y HL+PTRY+VD +F+K + + LK P+K++K
Sbjct: 50 PLKVTKDMGKKKIEKRNKLKPFLKVVSYTHLLPTRYSVDVAFDKTNINKEALKAPSKKRK 109
Query: 364 LRFNTRVRFEERYKSGKNKWFFQKLRF 444
+ +FEERYK+GKNKWFF KLRF
Sbjct: 110 ALVEVKSKFEERYKTGKNKWFFTKLRF 136
Score = 91.9 bits (218), Expect = 7e-18
Identities = 41/60 (68%), Positives = 49/60 (81%)
Frame = +3
Query: 42 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPXESAQEDGKE 221
MGKIMKPGKVVLVL G+YAGRKA+VVK DEG SD+ Y HA +AGIDRYP + ++ GK+
Sbjct: 1 MGKIMKPGKVVLVLRGKYAGRKAVVVKQQDEGVSDRTYPHAIIAGIDRYPLKVTKDMGKK 60
>UniRef50_Q4P3X4 Cluster: 60S ribosomal protein L27; n=8;
Dikarya|Rep: 60S ribosomal protein L27 - Ustilago maydis
(Smut fungus)
Length = 190
Score = 100 bits (240), Expect = 2e-20
Identities = 47/87 (54%), Positives = 61/87 (70%), Gaps = 2/87 (2%)
Frame = +1
Query: 190 PRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEK--FSAKDLKDPAKRKK 363
P+KV KRMG KI KRSK+KPFVKV++YNHLMPTRY ++ K + K+P++R+
Sbjct: 104 PQKVTKRMGAKKIAKRSKVKPFVKVISYNHLMPTRYALELEGLKGAVTQDTFKEPSQRED 163
Query: 364 LRFNTRVRFEERYKSGKNKWFFQKLRF 444
+ + FEE+Y SGKNKWFF LRF
Sbjct: 164 AKKQIKQIFEEKYTSGKNKWFFTPLRF 190
Score = 39.1 bits (87), Expect = 0.052
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +3
Query: 69 VVLVLSGRYAGRK-AIVVKNYDEGTSDKPYGHAFVAGIDRYPXESAQEDG 215
V LV Y+ R +V+K +D+G+ DK + + AGI+RYP + + G
Sbjct: 63 VSLVALREYSRRNDVVVIKQFDDGSKDKSFPYIIAAGIERYPQKVTKRMG 112
>UniRef50_P0C2H7 Cluster: 60S ribosomal protein L27-B; n=39;
Eukaryota|Rep: 60S ribosomal protein L27-B -
Saccharomyces cerevisiae (Baker's yeast)
Length = 136
Score = 99 bits (238), Expect = 3e-20
Identities = 45/87 (51%), Positives = 63/87 (72%), Gaps = 2/87 (2%)
Frame = +1
Query: 190 PRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEK--FSAKDLKDPAKRKK 363
P KV K+ G K+ KR+KIKPF+KVVNYNHL+PTRYT+D K S + + P++R++
Sbjct: 50 PSKVTKKHGAKKVAKRTKIKPFIKVVNYNHLLPTRYTLDVEAFKSVVSTETFEQPSQREE 109
Query: 364 LRFNTRVRFEERYKSGKNKWFFQKLRF 444
+ + FEER+++GKN+WFF KLRF
Sbjct: 110 AKKVVKKAFEERHQAGKNQWFFSKLRF 136
Score = 74.9 bits (176), Expect = 9e-13
Identities = 32/71 (45%), Positives = 48/71 (67%)
Frame = +3
Query: 42 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPXESAQEDGKE 221
M K +K GKV +V+ GRYAG+K ++VK +DEG+ P+GHA VAGI+RYP + ++ G +
Sbjct: 1 MAKFLKAGKVAVVVRGRYAGKKVVIVKPHDEGSKSHPFGHALVAGIERYPSKVTKKHGAK 60
Query: 222 *NPQEVQDKAF 254
+ + K F
Sbjct: 61 KVAKRTKIKPF 71
>UniRef50_Q4WJD7 Cluster: 60S ribosomal protein L27e; n=6;
Pezizomycotina|Rep: 60S ribosomal protein L27e -
Aspergillus fumigatus (Sartorya fumigata)
Length = 186
Score = 97.1 bits (231), Expect = 2e-19
Identities = 44/87 (50%), Positives = 59/87 (67%), Gaps = 2/87 (2%)
Frame = +1
Query: 190 PRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEK--FSAKDLKDPAKRKK 363
P KV +RMGK + KRS+IKPF+K+VNYNHLMPTRYT++ K S + K+ + R+
Sbjct: 100 PLKVTRRMGKKMVEKRSRIKPFIKIVNYNHLMPTRYTLELEGLKGAISQETFKEVSTRED 159
Query: 364 LRFNTRVRFEERYKSGKNKWFFQKLRF 444
+ + E+RY SGKN+WFF LRF
Sbjct: 160 AKKTVKKALEDRYTSGKNRWFFTPLRF 186
Score = 60.5 bits (140), Expect = 2e-08
Identities = 25/58 (43%), Positives = 39/58 (67%)
Frame = +3
Query: 48 KIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPXESAQEDGKE 221
K MK G+V ++ GRYAG+K ++V+ D G+ P+ +A VAGI+RYP + + GK+
Sbjct: 53 KFMKVGRVAIITRGRYAGKKVVIVQPNDTGSKAHPFPYAIVAGIERYPLKVTRRMGKK 110
>UniRef50_Q16PM4 Cluster: 60S ribosomal protein L27; n=1; Aedes
aegypti|Rep: 60S ribosomal protein L27 - Aedes aegypti
(Yellowfever mosquito)
Length = 98
Score = 90.6 bits (215), Expect = 2e-17
Identities = 40/50 (80%), Positives = 45/50 (90%)
Frame = +3
Query: 42 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYP 191
MGKIMK GKVVLVL GRYAGRKAI++K +D+GTSDK +GHA VAGIDRYP
Sbjct: 1 MGKIMKTGKVVLVLGGRYAGRKAIILKTFDDGTSDKQFGHALVAGIDRYP 50
Score = 41.9 bits (94), Expect = 0.007
Identities = 16/24 (66%), Positives = 21/24 (87%)
Frame = +1
Query: 190 PRKVHKRMGKNKIHKRSKIKPFVK 261
PR+V +RM K ++HKRSKIKPF+K
Sbjct: 50 PRRVTRRMNKTRLHKRSKIKPFIK 73
>UniRef50_Q6R7S0 Cluster: 60S ribosomal protein L27; n=7;
Fungi/Metazoa group|Rep: 60S ribosomal protein L27 -
Pectinaria gouldii (Trumpet worm) (Ice-cream cone worm)
Length = 138
Score = 85.0 bits (201), Expect = 8e-16
Identities = 38/71 (53%), Positives = 51/71 (71%)
Frame = +3
Query: 42 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPXESAQEDGKE 221
MGK +KP +V LVL+GR+AG+K +V+K YD GTS++PY HAFV GIDRYP + GK+
Sbjct: 1 MGKFVKPDRVALVLNGRHAGKKVVVMKIYDSGTSERPYAHAFVVGIDRYPRKVTATMGKK 60
Query: 222 *NPQEVQDKAF 254
+ + KAF
Sbjct: 61 KFERRTRVKAF 71
Score = 77.0 bits (181), Expect = 2e-13
Identities = 39/89 (43%), Positives = 54/89 (60%), Gaps = 4/89 (4%)
Frame = +1
Query: 190 PRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVD-FSFEK---FSAKDLKDPAKR 357
PRKV MGK K +R+++K F K +NYNHLM TRY+V F +K F K+ + R
Sbjct: 50 PRKVTATMGKKKFERRTRVKAFAKFINYNHLMFTRYSVQLFPEDKAKTFGPDRWKNFSDR 109
Query: 358 KKLRFNTRVRFEERYKSGKNKWFFQKLRF 444
K+ + + ER+ + KN+WFF KLRF
Sbjct: 110 KEFKKELQTVMRERFLAAKNRWFFTKLRF 138
>UniRef50_Q01A00 Cluster: RL27_PEA 60S ribosomal protein L27
pir||T06451 ribosomal protein L27- garden pea; n=1;
Ostreococcus tauri|Rep: RL27_PEA 60S ribosomal protein
L27 pir||T06451 ribosomal protein L27- garden pea -
Ostreococcus tauri
Length = 184
Score = 82.2 bits (194), Expect = 6e-15
Identities = 38/84 (45%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Frame = +1
Query: 196 KVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSAKDLKDPAKRK-KLRF 372
+V K+M + K KRSK K F+K +NY+HLMPTRYT+D +F+ D+ D A +K +
Sbjct: 101 QVTKKMDEKKQAKRSKCKTFIKNINYSHLMPTRYTLDVNFKDVVTSDVLDNATKKVAAQK 160
Query: 373 NTRVRFEERYKSGKNKWFFQKLRF 444
+ EER+K+GK++WFF +L F
Sbjct: 161 EAKKLLEERFKTGKSRWFFTRLAF 184
Score = 68.5 bits (160), Expect = 7e-11
Identities = 28/45 (62%), Positives = 36/45 (80%)
Frame = +3
Query: 57 KPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYP 191
+PGKVV+VL+GRYAG+KA++VKN D+G S PYGHA V G+ P
Sbjct: 24 QPGKVVVVLAGRYAGKKAVIVKNVDDGNSAHPYGHALVCGLSTIP 68
>UniRef50_Q86LP6 Cluster: 60S ribosomal protein L27; n=4;
Trypanosomatidae|Rep: 60S ribosomal protein L27 -
Leishmania major
Length = 133
Score = 81.8 bits (193), Expect = 7e-15
Identities = 35/85 (41%), Positives = 55/85 (64%)
Frame = +1
Query: 190 PRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSAKDLKDPAKRKKLR 369
P+KV + M K I +RS++ F++VVN+ H +PTRY +D S E ++ D +K+ + +
Sbjct: 49 PKKVVRGMSKRTIQRRSRVGVFLRVVNHKHFLPTRYNMDLSRELRGRINVSDASKKARSK 108
Query: 370 FNTRVRFEERYKSGKNKWFFQKLRF 444
R F+ RY +G N+WFFQ+LRF
Sbjct: 109 QLVRKLFQARYNAGSNRWFFQRLRF 133
Score = 71.7 bits (168), Expect = 8e-12
Identities = 27/48 (56%), Positives = 40/48 (83%)
Frame = +3
Query: 48 KIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYP 191
K +KPGKVV+V SGRYAG+KA++V+N D + ++PYGH+ +AG+ +YP
Sbjct: 2 KFLKPGKVVIVTSGRYAGKKAVIVQNTDSKSKERPYGHSLIAGMKKYP 49
>UniRef50_Q4Q504 Cluster: 60S ribosomal protein L27; n=6;
Trypanosomatidae|Rep: 60S ribosomal protein L27 -
Leishmania major
Length = 134
Score = 81.8 bits (193), Expect = 7e-15
Identities = 44/119 (36%), Positives = 68/119 (57%)
Frame = +1
Query: 88 AGTRVARLS*SRITTKVPPTSRTGMLSSLVSTGTPRKVHKRMGKNKIHKRSKIKPFVKVV 267
AG + + S + TK P R +L+ + P+KV + M K I +RS++ F++VV
Sbjct: 19 AGHKAVIVQNSDVVTKERPYGRA-LLAGIKKY--PKKVVRGMSKQTIARRSQVGVFLRVV 75
Query: 268 NYNHLMPTRYTVDFSFEKFSAKDLKDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKLRF 444
N+ H +PTRY VD S E ++ D +KR + + R F+ RY +G + WFFQ+LRF
Sbjct: 76 NHKHFLPTRYNVDMSKELRGKINVSDASKRSRSKRLVRHVFQARYNAGSSMWFFQRLRF 134
Score = 70.1 bits (164), Expect = 2e-11
Identities = 30/60 (50%), Positives = 43/60 (71%)
Frame = +3
Query: 42 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPXESAQEDGKE 221
M K +KPGKVV+V +GRYAG KA++V+N D T ++PYG A +AGI +YP + + K+
Sbjct: 1 MTKFLKPGKVVIVTAGRYAGHKAVIVQNSDVVTKERPYGRALLAGIKKYPKKVVRGMSKQ 60
>UniRef50_Q55BE6 Cluster: 60S ribosomal protein L27; n=1;
Dictyostelium discoideum AX4|Rep: 60S ribosomal protein
L27 - Dictyostelium discoideum AX4
Length = 144
Score = 75.4 bits (177), Expect = 6e-13
Identities = 40/92 (43%), Positives = 54/92 (58%), Gaps = 7/92 (7%)
Frame = +1
Query: 190 PRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEK-FS------AKDLKDP 348
PR + + M + I KR+ I+ FVKVVNYNH+MPTRY + E F+ +
Sbjct: 53 PRSIVRSMSRKTILKRTAIRSFVKVVNYNHIMPTRYNFEGRDESAFTGLKNTVTVESSQV 112
Query: 349 AKRKKLRFNTRVRFEERYKSGKNKWFFQKLRF 444
AKR R + FE ++K+GK+KWFF KLRF
Sbjct: 113 AKRAHTRLAVKKIFEAKHKAGKSKWFFSKLRF 144
Score = 72.5 bits (170), Expect = 5e-12
Identities = 29/50 (58%), Positives = 42/50 (84%), Gaps = 2/50 (4%)
Frame = +3
Query: 48 KIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDK--PYGHAFVAGIDRYP 191
K +KPG++V++L+G+YAGRKA+V+K +D+ T+ K PYGH VAGID+YP
Sbjct: 4 KFIKPGRLVILLNGKYAGRKAVVIKTFDDATASKSRPYGHCLVAGIDKYP 53
>UniRef50_A0BCG5 Cluster: Chromosome undetermined scaffold_10, whole
genome shotgun sequence; n=8; Paramecium tetraurelia|Rep:
Chromosome undetermined scaffold_10, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 1051
Score = 70.1 bits (164), Expect = 2e-11
Identities = 41/103 (39%), Positives = 59/103 (57%), Gaps = 18/103 (17%)
Frame = +1
Query: 190 PRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFS--------FEKFSAKDLKD 345
PRKV KRMG+ +I KR+ +K F+K +N NH+MPTRY ++ S E+ +LK+
Sbjct: 949 PRKVTKRMGQKQIRKRTTLKVFIKQLNLNHIMPTRYRLEESTLKEVRDRIERVKESELKN 1008
Query: 346 PAKRKKLRFNTRVRFEERY----------KSGKNKWFFQKLRF 444
KRK+LR N R E+Y K ++++ F KLRF
Sbjct: 1009 VEKRKELRKNLRKYLAEKYRTLPAGSLADKKAQSRFLFSKLRF 1051
Score = 64.1 bits (149), Expect = 2e-09
Identities = 26/61 (42%), Positives = 44/61 (72%)
Frame = +3
Query: 39 KMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPXESAQEDGK 218
+MGK +KPG+++++L+GRYAG+KAI++K +E T D + + V GI RYP + + G+
Sbjct: 899 EMGKFLKPGRLIVLLAGRYAGKKAILIKANEETTKDCKFPNGLVVGIQRYPRKVTKRMGQ 958
Query: 219 E 221
+
Sbjct: 959 K 959
>UniRef50_A0C4W1 Cluster: 60S ribosomal protein L27; n=1; Paramecium
tetraurelia|Rep: 60S ribosomal protein L27 - Paramecium
tetraurelia
Length = 262
Score = 68.9 bits (161), Expect = 6e-11
Identities = 41/103 (39%), Positives = 58/103 (56%), Gaps = 18/103 (17%)
Frame = +1
Query: 190 PRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFS--------FEKFSAKDLKD 345
PRKV KRMG+ +I KR+ +K F+K +N NH+MPTRY ++ S E+ +LK+
Sbjct: 160 PRKVTKRMGQKQIRKRTTLKVFIKQLNLNHIMPTRYRLEESTLKEVRDRIERVKEAELKN 219
Query: 346 PAKRKKLRFNTRVRFEERY----------KSGKNKWFFQKLRF 444
KRK LR N R E+Y K ++++ F KLRF
Sbjct: 220 VEKRKDLRKNLRKYLAEKYRTLPAGSLADKKAQSRFLFSKLRF 262
Score = 32.7 bits (71), Expect = 4.5
Identities = 12/21 (57%), Positives = 19/21 (90%)
Frame = +3
Query: 39 KMGKIMKPGKVVLVLSGRYAG 101
+MGK +KPG++V++L+GR AG
Sbjct: 63 QMGKFLKPGRLVVLLAGRQAG 83
>UniRef50_Q5CSF1 Cluster: 60S ribosomal protein L27; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L27 -
Cryptosporidium parvum Iowa II
Length = 162
Score = 68.1 bits (159), Expect = 1e-10
Identities = 28/61 (45%), Positives = 44/61 (72%)
Frame = +3
Query: 39 KMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPXESAQEDGK 218
KM K+MK G+VV++L+GRYAG+KA+VV ++ GT D+P+ VAG+++ P + + K
Sbjct: 17 KMAKLMKQGRVVVLLNGRYAGKKAVVVNTFESGTKDRPFPFVLVAGVEKAPLKVHKRLSK 76
Query: 219 E 221
E
Sbjct: 77 E 77
Score = 60.9 bits (141), Expect = 1e-08
Identities = 39/96 (40%), Positives = 58/96 (60%), Gaps = 11/96 (11%)
Frame = +1
Query: 190 PRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTV-DFSFEK-FSAKDLKDPAKRKK 363
P KVHKR+ K K+ K+S IKPF+K +N NH+MPTRY V DF + D+++ +K+
Sbjct: 67 PLKVHKRLSKEKLKKKSTIKPFLKSINMNHVMPTRYVVSDFDIKPLLQGIDMQEADGKKQ 126
Query: 364 ------LRFNTR-VRFE-ERYKSGKNKWFFQK-LRF 444
L FN + + + E+ K+ K+ F +K LRF
Sbjct: 127 ALRALHLAFNDKLINIQSEKGKAPKDLIFLRKPLRF 162
>UniRef50_UPI00006CAB39 Cluster: hypothetical protein
TTHERM_00780960; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00780960 - Tetrahymena
thermophila SB210
Length = 128
Score = 67.3 bits (157), Expect = 2e-10
Identities = 27/71 (38%), Positives = 49/71 (69%)
Frame = +3
Query: 9 IGTRVREYPSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRY 188
I ++R + G+ +K G+VV++L GR+AG+KA++VK+ ++GT D+ +GH VAG++R
Sbjct: 5 INRKLRVIIASFGRGLKYGRVVILLQGRFAGKKAVIVKSSEDGTKDRKFGHVLVAGVERS 64
Query: 189 PXESAQEDGKE 221
P + + G +
Sbjct: 65 PKKVTKRMGSK 75
Score = 57.6 bits (133), Expect = 1e-07
Identities = 23/36 (63%), Positives = 29/36 (80%)
Frame = +1
Query: 187 TPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTR 294
+P+KV KRMG KI KR+ +KPF+K VN NH+MPTR
Sbjct: 64 SPKKVTKRMGSKKIQKRTSVKPFIKYVNLNHIMPTR 99
>UniRef50_Q4N659 Cluster: 60S ribosomal protein L27e, putative; n=3;
Piroplasmida|Rep: 60S ribosomal protein L27e, putative -
Theileria parva
Length = 148
Score = 62.1 bits (144), Expect = 6e-09
Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
Frame = +1
Query: 190 PRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEK---FSAKDLKDPAKRK 360
P KV K+M KI KR K+K FVK VN NHLMPTRY V + + S + +++ + RK
Sbjct: 50 PMKVTKKMSSKKIEKRLKLKAFVKYVNVNHLMPTRYMVTTTLDPKSLVSDEQMENKSSRK 109
Query: 361 KLRFNTRVRFEERYKSGKN 417
+ R + + EE + + +N
Sbjct: 110 EARKSVKAVLEECFSNPEN 128
Score = 60.1 bits (139), Expect = 3e-08
Identities = 27/71 (38%), Positives = 48/71 (67%)
Frame = +3
Query: 42 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPXESAQEDGKE 221
MGK++KPG+VV++LSGR AG KA+VV+ + + +PY + VAG+++ P + ++ +
Sbjct: 1 MGKLLKPGRVVILLSGRRAGCKAVVVQTNESSSKKRPYLNCLVAGVEKAPMKVTKKMSSK 60
Query: 222 *NPQEVQDKAF 254
+ ++ KAF
Sbjct: 61 KIEKRLKLKAF 71
>UniRef50_Q7RNR5 Cluster: 60S ribosomal protein L27 homolog; n=4;
Plasmodium|Rep: 60S ribosomal protein L27 homolog -
Plasmodium yoelii yoelii
Length = 181
Score = 61.7 bits (143), Expect = 9e-09
Identities = 24/55 (43%), Positives = 41/55 (74%)
Frame = +3
Query: 54 MKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPXESAQEDGK 218
+KPGKVV++L+GR AG+KAI++ Y+ T ++PY + VAGI+++P + ++ K
Sbjct: 97 LKPGKVVIMLNGRRAGKKAIIINTYEGQTRERPYSYCLVAGIEKHPLKVTKKMSK 151
Score = 54.4 bits (125), Expect = 1e-06
Identities = 23/36 (63%), Positives = 28/36 (77%)
Frame = +1
Query: 190 PRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRY 297
P KV K+M K KI KRSK+K FVK +N NH++PTRY
Sbjct: 142 PLKVTKKMSKGKIIKRSKVKAFVKYINVNHILPTRY 177
>UniRef50_UPI000049913D Cluster: 60S ribosomal protein L27; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L27 - Entamoeba histolytica HM-1:IMSS
Length = 139
Score = 59.7 bits (138), Expect = 3e-08
Identities = 27/71 (38%), Positives = 43/71 (60%)
Frame = +3
Query: 42 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPXESAQEDGKE 221
M KI+ PG+VV++LSGR+AG+KA+V +GT D+ YG V G++R P + ++ +
Sbjct: 1 MSKILAPGRVVIILSGRFAGKKAVVSSVNLQGTKDRKYGFVTVVGVERAPLKITRKMSAK 60
Query: 222 *NPQEVQDKAF 254
K+F
Sbjct: 61 VQEMRTSVKSF 71
Score = 58.0 bits (134), Expect = 1e-07
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 7/92 (7%)
Frame = +1
Query: 190 PRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFS-AKDLK----DPAK 354
P K+ ++M R+ +K F KV+N NH+MPT+YTV + E+F+ K +K + K
Sbjct: 50 PLKITRKMSAKVQEMRTSVKSFCKVINVNHVMPTKYTV--NLEQFNLIKQVKINNFEAGK 107
Query: 355 RKKLRFNTRV--RFEERYKSGKNKWFFQKLRF 444
+ + +F E Y+ GK W F KLRF
Sbjct: 108 VYPISQKKAISSQFAEEYRKGKESWLFTKLRF 139
>UniRef50_A5I8K6 Cluster: Putative uncharacterized protein; n=1;
Tribolium castaneum|Rep: Putative uncharacterized
protein - Tribolium castaneum (Red flour beetle)
Length = 95
Score = 58.8 bits (136), Expect = 6e-08
Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
Frame = +1
Query: 163 LSSLVSTGTPRKVHKRMG-KNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSAKDL 339
+ S +S G R++ G + + +R + +P V + H+ P S K
Sbjct: 1 MKSSISAGQGRRIGIISGGRGQNTQRVQNQPLVIGCDEKHVSPHVIGGITSGGPIPTKSS 60
Query: 340 KDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKLRF 444
K P KRK++RF TRV+ +E KSG+NKWFFQK RF
Sbjct: 61 KYPIKRKRVRFQTRVKVQEGSKSGRNKWFFQKGRF 95
>UniRef50_A2DNC1 Cluster: 60S ribosomal protein L27; n=3;
Trichomonas vaginalis G3|Rep: 60S ribosomal protein L27
- Trichomonas vaginalis G3
Length = 139
Score = 58.8 bits (136), Expect = 6e-08
Identities = 35/92 (38%), Positives = 52/92 (56%), Gaps = 7/92 (7%)
Frame = +1
Query: 190 PRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTV---DFSFEKFSAKD----LKDP 348
P+KV K M + K++++K FVK VN+NH+M TR+ V DF F+K S + LKD
Sbjct: 49 PKKVTKDMPTEVLVKKTQVKLFVKAVNFNHVMLTRHNVKDEDF-FKKISVEKVVAALKDA 107
Query: 349 AKRKKLRFNTRVRFEERYKSGKNKWFFQKLRF 444
+K L ++Y + K WFF+ L+F
Sbjct: 108 PAKKALLTEYAAVLRQKYLNNKMAWFFKPLQF 139
Score = 57.2 bits (132), Expect = 2e-07
Identities = 25/68 (36%), Positives = 45/68 (66%)
Frame = +3
Query: 51 IMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPXESAQEDGKE*NP 230
+++ G+ V++L GR+AG+KA+V+ Y EGT D+ + +A V GI++YP + ++ E
Sbjct: 3 LLQAGRFVVMLQGRHAGKKAVVLAAYPEGTEDRKFPYAIVMGIEKYPKKVTKDMPTEVLV 62
Query: 231 QEVQDKAF 254
++ Q K F
Sbjct: 63 KKTQVKLF 70
>UniRef50_Q7QVA1 Cluster: 60S ribosomal protein L27; n=1; Giardia
lamblia ATCC 50803|Rep: 60S ribosomal protein L27 -
Giardia lamblia ATCC 50803
Length = 135
Score = 55.2 bits (127), Expect = 7e-07
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Frame = +1
Query: 190 PRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKF-SAKDLKDPAKRKKL 366
PR++ M + R +++ FVK +N NHLMPT ++ +++ F S + + D KR+++
Sbjct: 48 PRRITNSMSDEEAVCRGRVRSFVKCMNVNHLMPTSCRLENNYKDFISTQTVADVTKRREI 107
Query: 367 RFNTRVRFEERYKSGKNKWFFQKL 438
F+ R ++ WFF KL
Sbjct: 108 IETVNKDFQRRILEHRDTWFFTKL 131
Score = 37.9 bits (84), Expect = 0.12
Identities = 20/47 (42%), Positives = 30/47 (63%)
Frame = +3
Query: 51 IMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYP 191
I+KPG V +VL GR+AG+KA++V+ ++ +A VAGI P
Sbjct: 5 IIKPGLVCIVLQGRHAGKKAVIVEALPH---NERGSYAIVAGIAALP 48
>UniRef50_UPI0000F2B958 Cluster: PREDICTED: similar to ribosomal
protein L27; n=1; Monodelphis domestica|Rep: PREDICTED:
similar to ribosomal protein L27 - Monodelphis domestica
Length = 124
Score = 51.2 bits (117), Expect = 1e-05
Identities = 26/44 (59%), Positives = 30/44 (68%)
Frame = +1
Query: 190 PRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEK 321
PRK+ +GK KI KRSKIK FV V NYNHL RY+VD +K
Sbjct: 35 PRKLTAALGK-KISKRSKIKFFVAVYNYNHLKSIRYSVDIPLDK 77
Score = 42.7 bits (96), Expect = 0.004
Identities = 20/41 (48%), Positives = 26/41 (63%)
Frame = +3
Query: 99 GRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPXESAQEDGKE 221
G +I+ + D+GTSDK Y HA VAGID YP + GK+
Sbjct: 5 GSSSILFYDTDDGTSDKSYSHAQVAGIDLYPRKLTAALGKK 45
>UniRef50_Q98SC5 Cluster: 60S ribosomal protein L27; n=1; Guillardia
theta|Rep: 60S ribosomal protein L27 - Guillardia theta
(Cryptomonas phi)
Length = 144
Score = 46.0 bits (104), Expect = 5e-04
Identities = 26/96 (27%), Positives = 45/96 (46%), Gaps = 12/96 (12%)
Frame = +1
Query: 193 RKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVD-----------FSFEKFSAKDL 339
+K+ M K KI + K F+K +N H+ PTRY ++ + K K
Sbjct: 49 KKIKYNMSKRKIISNLRFKTFIKTINIKHVFPTRYVIETDDVFKTLIDAYYTNKLGNKLN 108
Query: 340 KDPAKRKKLRF-NTRVRFEERYKSGKNKWFFQKLRF 444
+ ++ K+ + ++R GKN WFF+K++F
Sbjct: 109 EHTNEKAKVNLVSINNYLQDRLLRGKNLWFFKKMKF 144
Score = 40.7 bits (91), Expect = 0.017
Identities = 18/28 (64%), Positives = 23/28 (82%)
Frame = +3
Query: 42 MGKIMKPGKVVLVLSGRYAGRKAIVVKN 125
M I K G+VV+VLSG+YAG+KA V+KN
Sbjct: 1 MVNIYKTGRVVIVLSGKYAGKKAFVLKN 28
>UniRef50_Q8SS64 Cluster: 60S RIBOSOMAL PROTEIN L27; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L27
- Encephalitozoon cuniculi
Length = 126
Score = 38.3 bits (85), Expect = 0.091
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Frame = +1
Query: 232 KRSKIKPFVKVVNYN--HLMPTRYTVDFSFEKFSAKDLKDPAKRKKLRFN-TRVRFEERY 402
KR K ++ + YN HL+ TRY D ++D A+ KK+ N T+ + +
Sbjct: 53 KRRNAKFYIILKKYNIAHLIATRYKADLGLATIDYSGIEDNAETKKVLTNKTKDAMMKAW 112
Query: 403 KSGKNKWFFQKLRF 444
K K K+ F L F
Sbjct: 113 KENKAKFLFSSLSF 126
Score = 33.5 bits (73), Expect = 2.6
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +3
Query: 60 PGKVVLVLSGRYAGRKAIVVKNYDE 134
P +V+V SG+ AG+KA+V+K DE
Sbjct: 5 PNMIVVVTSGKNAGKKAVVIKQIDE 29
>UniRef50_Q1DRV0 Cluster: 60S ribosomal protein L6; n=15;
Pezizomycotina|Rep: 60S ribosomal protein L6 -
Coccidioides immitis
Length = 206
Score = 36.7 bits (81), Expect = 0.28
Identities = 12/40 (30%), Positives = 29/40 (72%)
Frame = +3
Query: 18 RVREYPSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 137
R +P+K+ ++PG ++++L+GR+ G++ I++K+ +G
Sbjct: 46 RKTAHPTKLRPSLQPGTILILLAGRFRGKRVILLKHLGQG 85
>UniRef50_Q54D63 Cluster: 60S ribosomal protein L6; n=2;
Eukaryota|Rep: 60S ribosomal protein L6 - Dictyostelium
discoideum AX4
Length = 236
Score = 35.5 bits (78), Expect = 0.64
Identities = 12/30 (40%), Positives = 22/30 (73%)
Frame = +3
Query: 48 KIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 137
K + PG V+++L+GR+AG++ + +K D G
Sbjct: 89 KSITPGTVLIILAGRFAGKRVVALKQLDSG 118
>UniRef50_Q02326 Cluster: 60S ribosomal protein L6-A; n=16;
Dikarya|Rep: 60S ribosomal protein L6-A - Saccharomyces
cerevisiae (Baker's yeast)
Length = 176
Score = 35.5 bits (78), Expect = 0.64
Identities = 13/42 (30%), Positives = 27/42 (64%)
Frame = +3
Query: 15 TRVREYPSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGT 140
TR P K+ + PG V+++L+GR+ G++ + +K+ ++ T
Sbjct: 21 TRKAARPQKLRASLVPGTVLILLAGRFRGKRVVYLKHLEDNT 62
>UniRef50_Q0VRK4 Cluster: Putative uncharacterized protein; n=1;
Alcanivorax borkumensis SK2|Rep: Putative
uncharacterized protein - Alcanivorax borkumensis
(strain SK2 / ATCC 700651 / DSM 11573)
Length = 406
Score = 34.3 bits (75), Expect = 1.5
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +3
Query: 30 YPSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGID 182
Y + +I + V +V++ RY G+ + E D+P GHAF AG+D
Sbjct: 212 YAYAIARIAEESPVPIVVARRYIGKIKNSAEEVVEIMPDQPLGHAFRAGVD 262
>UniRef50_Q3LW52 Cluster: Ribosomal protein L27; n=1; Bigelowiella
natans|Rep: Ribosomal protein L27 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 131
Score = 34.3 bits (75), Expect = 1.5
Identities = 21/76 (27%), Positives = 37/76 (48%)
Frame = +3
Query: 63 GKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPXESAQEDGKE*NPQEVQ 242
GK++ L+G+YAG+ +VK+Y + + K + H V + + + + Q
Sbjct: 8 GKLIFSLAGKYAGKYGFIVKSYSKYKNFKNFNHFLVCFLTNTKFTN-KNSKSFISKMNDQ 66
Query: 243 DKAFREGCKL*SLDAN 290
K F+ KL L+AN
Sbjct: 67 PKIFKYKIKLKILNAN 82
>UniRef50_Q5B7I5 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized protein
- Emericella nidulans (Aspergillus nidulans)
Length = 1480
Score = 33.9 bits (74), Expect = 2.0
Identities = 20/63 (31%), Positives = 32/63 (50%)
Frame = +1
Query: 178 STGTPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSAKDLKDPAKR 357
S+ TP + +R+G + S IK ++ V +H++PTRY + A L A R
Sbjct: 920 SSDTPADILQRLGDVNVSTMSHIKQQLEQVMPHHMVPTRYQIWARMPTSLAGKLDRKALR 979
Query: 358 KKL 366
K+L
Sbjct: 980 KEL 982
>UniRef50_Q1YQZ7 Cluster: Short chain dehydrogenase family protein;
n=1; gamma proteobacterium HTCC2207|Rep: Short chain
dehydrogenase family protein - gamma proteobacterium
HTCC2207
Length = 282
Score = 33.1 bits (72), Expect = 3.4
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = -3
Query: 178 IPATKACPYGLSEVPSS*FLTTIALRPAYRPLKTSTTLPGFIILPILEG 32
IP+T A PY S+ + + YR ++ S PG I PIL G
Sbjct: 151 IPSTNAVPYSTSKFAVVGLSQALRIEAEYRGVRVSALCPGAIQTPILTG 199
>UniRef50_UPI0000D9DE6C Cluster: PREDICTED: similar to 60S ribosomal
protein L32; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 60S ribosomal protein L32 - Macaca mulatta
Length = 199
Score = 32.7 bits (71), Expect = 4.5
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +1
Query: 121 RITTKVPPTSRTGMLSSLVSTGTPRKVHKRMG-KNKIHKRSKIKPFVKVVNYNHLMPTRY 297
R T P +S+T M S L TG +V G N+IH+R K + + + Y ++
Sbjct: 74 RGTRHSPGSSQTDM-SKLSVTGRHLEVLTTRGIDNRIHRRFKSQFLMSNIGYGSNKKIKH 132
Query: 298 TVDFSFEKFSAKDLKD 345
T+ S +KF ++K+
Sbjct: 133 TLPSSLQKFLVHNIKE 148
>UniRef50_Q7XY83 Cluster: 60S ribosomal protein L6; n=1; Griffithsia
japonica|Rep: 60S ribosomal protein L6 - Griffithsia
japonica (Red alga)
Length = 216
Score = 32.7 bits (71), Expect = 4.5
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +3
Query: 33 PSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 137
P+K+ +K G +V++L+G + G + +V+K D G
Sbjct: 65 PTKLRPSIKSGTIVILLAGVFRGSRVVVLKQLDSG 99
>UniRef50_Q01IK4 Cluster: 60S ribosomal protein L6; n=17;
Eukaryota|Rep: 60S ribosomal protein L6 - Oryza sativa
(Rice)
Length = 222
Score = 32.7 bits (71), Expect = 4.5
Identities = 11/35 (31%), Positives = 23/35 (65%)
Frame = +3
Query: 33 PSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 137
P+K+ + PG V+++L+GR+ G++ + +K G
Sbjct: 71 PTKLRSSITPGTVLILLAGRFMGKRVVFLKQLKSG 105
>UniRef50_A1Z9C2 Cluster: CG17050-PA; n=1; Drosophila
melanogaster|Rep: CG17050-PA - Drosophila melanogaster
(Fruit fly)
Length = 506
Score = 32.7 bits (71), Expect = 4.5
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +1
Query: 286 PTRYTVDFSFEKFSAKDLKDPAKRKKLRF 372
P Y +F FE+F KDL+ AK K L+F
Sbjct: 60 PKPYVKEFEFERFHLKDLRSDAKFKHLQF 88
>UniRef50_A0CYT3 Cluster: 60S ribosomal protein L6; n=5;
Oligohymenophorea|Rep: 60S ribosomal protein L6 -
Paramecium tetraurelia
Length = 208
Score = 32.7 bits (71), Expect = 4.5
Identities = 13/35 (37%), Positives = 25/35 (71%)
Frame = +3
Query: 33 PSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 137
P+ + KI+ PG+V+++LSGR+ G++ + +K G
Sbjct: 52 PATLRKIV-PGQVLILLSGRFQGKRVVFLKQLKSG 85
>UniRef50_Q9MTH5 Cluster: Putative membrane protein ycf1; n=3;
Oenothera|Rep: Putative membrane protein ycf1 - Oenothera
hookeri (Hooker's evening primrose)
Length = 2434
Score = 32.7 bits (71), Expect = 4.5
Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +1
Query: 277 HLMPTRYTVDFS-FEKFSAKDLKDPAKRKKLRFNTRVRFEERYKSGKNKW 423
HL RY + + +F K+LKD + ++L F+++++ + SGKN+W
Sbjct: 1628 HLDKLRYVLQYDGTSRFLKKELKDYFEAQEL-FHSKLKHKNSLNSGKNQW 1676
>UniRef50_Q9C9C6 Cluster: 60S ribosomal protein L6-2; n=11;
Eukaryota|Rep: 60S ribosomal protein L6-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 233
Score = 32.7 bits (71), Expect = 4.5
Identities = 11/35 (31%), Positives = 23/35 (65%)
Frame = +3
Query: 33 PSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 137
P+K+ + PG V+++L+GR+ G++ + +K G
Sbjct: 82 PAKLRASITPGTVLIILAGRFKGKRVVFLKQLASG 116
>UniRef50_Q8ZYB4 Cluster: 50S ribosomal protein L14e; n=14;
Archaea|Rep: 50S ribosomal protein L14e - Pyrobaculum
aerophilum
Length = 103
Score = 32.7 bits (71), Expect = 4.5
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +3
Query: 42 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDE 134
M K++ G+VV+ + GR AGRKA+VV DE
Sbjct: 1 MVKVIDIGRVVVKVLGREAGRKAVVVDIVDE 31
>UniRef50_UPI0000ECCEB7 Cluster: UPI0000ECCEB7 related cluster; n=1;
Gallus gallus|Rep: UPI0000ECCEB7 UniRef100 entry -
Gallus gallus
Length = 75
Score = 32.3 bits (70), Expect = 6.0
Identities = 18/63 (28%), Positives = 33/63 (52%)
Frame = +1
Query: 211 MGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSAKDLKDPAKRKKLRFNTRVRF 390
+GK K K+ K K + + HL+ ++ T + +K + LK K+K +F+ + +
Sbjct: 1 VGKKKKEKKKKKKENYRNILEAHLLKSKQTNKQTNKKHPSFTLKKKKKKKAFKFSGKFKS 60
Query: 391 EER 399
EER
Sbjct: 61 EER 63
>UniRef50_Q1R0D3 Cluster: Short-chain dehydrogenase/reductase SDR
precursor; n=10; cellular organisms|Rep: Short-chain
dehydrogenase/reductase SDR precursor - Chromohalobacter
salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB13768)
Length = 264
Score = 32.3 bits (70), Expect = 6.0
Identities = 19/60 (31%), Positives = 27/60 (45%)
Frame = -3
Query: 214 PSSCALSXGYLSIPATKACPYGLSEVPSS*FLTTIALRPAYRPLKTSTTLPGFIILPILE 35
P A+S P +A YG S+ S FL ++ L A + S PGF+ P+ E
Sbjct: 137 PQLAAVSSASAYFPLPRAEAYGASKAAISYFLASLRLDLAAEGIDVSLIHPGFVRTPLTE 196
>UniRef50_Q4N3I8 Cluster: 60S ribosomal protein L6e, putative; n=3;
Piroplasmida|Rep: 60S ribosomal protein L6e, putative -
Theileria parva
Length = 212
Score = 32.3 bits (70), Expect = 6.0
Identities = 14/40 (35%), Positives = 27/40 (67%), Gaps = 2/40 (5%)
Frame = +3
Query: 24 REYPS--KMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 137
R+Y S K+ + +KPG V+++L+G Y G++ +++K G
Sbjct: 32 RKYASVPKVRESLKPGAVLILLTGSYKGKRVVLLKVLKSG 71
>UniRef50_Q8PSL5 Cluster: Putative uncharacterized protein; n=1;
Methanosarcina mazei|Rep: Putative uncharacterized
protein - Methanosarcina mazei (Methanosarcina frisia)
Length = 1110
Score = 32.3 bits (70), Expect = 6.0
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +1
Query: 307 FSFEKFSAKDLKDPAKRKKLRFNTRVRFEERYKS 408
FSFE+F A +PA R +RF R R E +S
Sbjct: 459 FSFERFGATGTGEPALRGSVRFTLRFRMSEETES 492
>UniRef50_UPI00006CB01E Cluster: Kinesin motor domain containing
protein; n=1; Tetrahymena thermophila SB210|Rep: Kinesin
motor domain containing protein - Tetrahymena thermophila
SB210
Length = 974
Score = 31.9 bits (69), Expect = 7.9
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +1
Query: 217 KNKIHKRSKIKPFV--KVVNYNHLMPTRYTVDFSFEKFSAKDLKDPAKRKKL 366
K + +K + F+ K++ YN P YT +F +EK ++ KRK++
Sbjct: 867 KCQFYKNKEEPQFICNKILEYNEYSPHYYTCEFGYEKCDIQECSKLIKRKEI 918
>UniRef50_A5V0E5 Cluster: Polar amino acid ABC transporter, inner
membrane subunit; n=1; Roseiflexus sp. RS-1|Rep: Polar
amino acid ABC transporter, inner membrane subunit -
Roseiflexus sp. RS-1
Length = 403
Score = 31.9 bits (69), Expect = 7.9
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = -2
Query: 230 WILFFPILLCTFRGVPVDTSD-ESMPVRLVGGTFVVIL 120
WIL+FPIL GV D S +P L GG + +L
Sbjct: 167 WILYFPILFVLVSGVGADDSPIPPVPTNLWGGLLLTLL 204
>UniRef50_Q4Q4D3 Cluster: 60S ribosomal protein L6, putative; n=11;
Trypanosomatidae|Rep: 60S ribosomal protein L6, putative
- Leishmania major
Length = 195
Score = 31.9 bits (69), Expect = 7.9
Identities = 12/32 (37%), Positives = 23/32 (71%)
Frame = +3
Query: 27 EYPSKMGKIMKPGKVVLVLSGRYAGRKAIVVK 122
EY + + K PG + ++L+GR+ GR+A+++K
Sbjct: 25 EYTT-LRKSCAPGAIAIILAGRFRGRRAVILK 55
>UniRef50_Q7SH22 Cluster: 60S ribosomal protein L6; n=2;
Sordariaceae|Rep: 60S ribosomal protein L6 - Neurospora
crassa
Length = 207
Score = 31.9 bits (69), Expect = 7.9
Identities = 10/26 (38%), Positives = 21/26 (80%)
Frame = +3
Query: 60 PGKVVLVLSGRYAGRKAIVVKNYDEG 137
PG V+++L+GR+ G++ +++K D+G
Sbjct: 41 PGTVLILLAGRFRGKRVVLLKALDQG 66
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 482,967,911
Number of Sequences: 1657284
Number of extensions: 9587384
Number of successful extensions: 28598
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 27813
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28572
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 28130105105
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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