Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0444
         (486 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712902-1|CAN84641.1|   95|Tribolium castaneum hypothetical pro...    59   2e-11
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    23   1.5  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   2.6  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    22   2.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   3.4  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           22   3.4  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   4.5  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   5.9  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   5.9  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   5.9  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   7.9  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   7.9  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    21   7.9  
AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of act...    21   7.9  
AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity mod...    21   7.9  

>AM712902-1|CAN84641.1|   95|Tribolium castaneum hypothetical
           protein protein.
          Length = 95

 Score = 58.8 bits (136), Expect = 2e-11
 Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
 Frame = +1

Query: 163 LSSLVSTGTPRKVHKRMG-KNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSAKDL 339
           + S +S G  R++    G + +  +R + +P V   +  H+ P       S      K  
Sbjct: 1   MKSSISAGQGRRIGIISGGRGQNTQRVQNQPLVIGCDEKHVSPHVIGGITSGGPIPTKSS 60

Query: 340 KDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKLRF 444
           K P KRK++RF TRV+ +E  KSG+NKWFFQK RF
Sbjct: 61  KYPIKRKRVRFQTRVKVQEGSKSGRNKWFFQKGRF 95


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 247 KPFVKVVNYNHLMPTRY 297
           K F  +VN  HL+ T+Y
Sbjct: 83  KNFTNIVNLTHLLETQY 99


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 7/18 (38%), Positives = 14/18 (77%)
 Frame = -3

Query: 274 YSLQPSRKALSWTSCGFY 221
           +SLQ + + L +++CGF+
Sbjct: 333 FSLQLAHQKLEFSACGFF 350


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 7/18 (38%), Positives = 14/18 (77%)
 Frame = -3

Query: 274 YSLQPSRKALSWTSCGFY 221
           +SLQ + + L +++CGF+
Sbjct: 158 FSLQLAHQKLEFSACGFF 175


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -1

Query: 102  DPRTGHLRPALLYPASL 52
            D +TGH+ P   YP  +
Sbjct: 2520 DKQTGHVAPLYYYPGDV 2536


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -1

Query: 84  LRPALLYPASLSYPSWRDIPLPSCRF 7
           L+P  L P  L  P+ +  P  SC++
Sbjct: 76  LQPQRLAPTHLQSPNTQTHPSASCKY 101


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -2

Query: 197 FRGVPVDTSDESMPVRLV 144
           +RGV +DT+    PV L+
Sbjct: 218 YRGVMIDTARNFFPVDLI 235


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 5/7 (71%), Positives = 7/7 (100%)
 Frame = +1

Query: 28  NIPPRWV 48
           N+PPRW+
Sbjct: 696 NVPPRWI 702


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = -3

Query: 241 WTSCGFYSFPSSCALSXGYLSIPATKACPYGLSEVP 134
           + +CG     ++ A+S GYL    +++    LS  P
Sbjct: 527 YIACGIMILVANVAISFGYLISCVSRSVSMALSIGP 562


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = -3

Query: 241 WTSCGFYSFPSSCALSXGYLSIPATKACPYGLSEVP 134
           + +CG     ++ A+S GYL    +++    LS  P
Sbjct: 527 YIACGIMILVANVAISFGYLISCVSRSVSMALSIGP 562


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +3

Query: 96  AGRKAIVVKNYDEGTSDKP 152
           AG+K   VK  DE   +KP
Sbjct: 73  AGKKPENVKKEDESDEEKP 91


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 13/47 (27%), Positives = 19/47 (40%)
 Frame = +1

Query: 184 GTPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKF 324
           GTP K       N + K   +   V V   NHL      + F+F+ +
Sbjct: 14  GTPPKFELPTTHNCLKKVLLLSQIVGVFPLNHLNEEPEKLHFTFKSW 60


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -3

Query: 271 SLQPSRKALSWTSCGFYSFPSSCALS 194
           +L+ S+  L  T+C F+S  ++  LS
Sbjct: 397 ALKLSQSELEITACKFFSIDNALLLS 422


>AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of
           activity of ets genes protein.
          Length = 108

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = -3

Query: 154 YGLSEVPSS*FL 119
           +GL EVPSS FL
Sbjct: 55  HGLPEVPSSRFL 66


>AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity
           modulator protein.
          Length = 108

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = -3

Query: 154 YGLSEVPSS*FL 119
           +GL EVPSS FL
Sbjct: 55  HGLPEVPSSRFL 66


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,784
Number of Sequences: 336
Number of extensions: 2485
Number of successful extensions: 18
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11315916
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)