Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0444
(486 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0951 - 21769342-21769752 81 5e-16
02_02_0470 - 10700092-10700505 80 8e-16
08_02_1080 - 24197514-24199415 35 0.030
02_04_0433 - 22891261-22891509,22892181-22892301,22892405-228924... 35 0.040
12_02_0674 - 21745321-21746223,21746229-21747608 31 0.49
04_04_0371 + 24771687-24772081,24772139-24772535,24773394-247734... 31 0.49
02_04_0140 - 20156655-20156834,20157139-20159345,20159970-20160042 30 1.1
10_07_0138 + 13325418-13325954 29 2.6
04_04_0211 - 23636377-23636532,23636624-23636805,23637853-236379... 29 2.6
09_01_0103 - 1628763-1628879,1641827-1642921,1645126-1645476,164... 28 3.5
05_04_0110 + 18058821-18058900,18059119-18059182,18059351-180594... 28 3.5
12_02_0502 - 19746100-19746185,19746745-19750474 28 4.6
02_05_0211 - 26800089-26800439,26800458-26800649,26800721-268007... 28 4.6
02_02_0047 + 6369566-6369661,6369857-6369916,6370320-6370385 28 4.6
10_05_0026 + 8262237-8262899,8263300-8263509,8263599-8265480,826... 27 6.0
08_02_0167 - 13564466-13566227,13566361-13566644,13566684-135675... 27 6.0
08_01_0441 + 3890231-3890845,3891253-3894220,3906625-3906713,390... 27 6.0
04_03_0925 - 20856628-20856690,20856786-20856845,20856924-208570... 27 6.0
04_03_0540 + 16929782-16929834,16929937-16930032,16930111-169301... 27 6.0
01_06_1350 + 36505926-36505978,36506081-36506176,36506255-365063... 27 6.0
10_02_0059 + 4785858-4786988 27 8.0
09_04_0061 - 14256767-14256845,14256862-14257224,14260846-14261555 27 8.0
09_02_0555 - 10588685-10592038 27 8.0
07_03_1512 + 27288779-27289222,27298101-27298399,27298499-272985... 27 8.0
03_02_1029 - 13488535-13493037 27 8.0
01_01_0469 - 3456067-3456123,3456414-3456565,3456649-3456779,345... 27 8.0
>10_08_0951 - 21769342-21769752
Length = 136
Score = 81.0 bits (191), Expect = 5e-16
Identities = 37/87 (42%), Positives = 58/87 (66%), Gaps = 2/87 (2%)
Frame = +1
Query: 190 PRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSAKDLKDPAKRKKLR 369
P+KV ++ K K+S++K F+K+VN+ HLMPTRYT+D ++ +A + KK+
Sbjct: 50 PKKVIRKDSAKKTAKKSRVKCFLKLVNFTHLMPTRYTLDVDLKEVAAGPDALATRDKKVA 109
Query: 370 F--NTRVRFEERYKSGKNKWFFQKLRF 444
+ + R E+R+K+GKN+WFF KLRF
Sbjct: 110 ACKSAKARLEDRFKTGKNRWFFTKLRF 136
Score = 78.6 bits (185), Expect = 2e-15
Identities = 32/71 (45%), Positives = 51/71 (71%)
Frame = +3
Query: 42 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPXESAQEDGKE 221
M K +KPGK V++L GR+AGRKA++V+ ++EGT D+PYGH VAG+ +YP + ++D +
Sbjct: 1 MVKFLKPGKAVILLQGRFAGRKAVIVRVFEEGTRDRPYGHCLVAGLAKYPKKVIRKDSAK 60
Query: 222 *NPQEVQDKAF 254
++ + K F
Sbjct: 61 KTAKKSRVKCF 71
>02_02_0470 - 10700092-10700505
Length = 137
Score = 80.2 bits (189), Expect = 8e-16
Identities = 33/71 (46%), Positives = 51/71 (71%)
Frame = +3
Query: 42 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPXESAQEDGKE 221
M K +KPGK V++L GRYAGRKA++V+ ++EGT D+PYGH VAG+ +YP + ++D +
Sbjct: 1 MVKFLKPGKAVILLQGRYAGRKAVIVRVFEEGTRDRPYGHCLVAGLAKYPKKVIRKDSAK 60
Query: 222 *NPQEVQDKAF 254
++ + K F
Sbjct: 61 KTAKKSRVKCF 71
Score = 79.8 bits (188), Expect = 1e-15
Identities = 39/88 (44%), Positives = 58/88 (65%), Gaps = 3/88 (3%)
Frame = +1
Query: 190 PRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSAKDLKDPAKR-KKL 366
P+KV ++ K K+S++K F+K+VN+ H+MPTRYT+D F+ ++ A R KK+
Sbjct: 50 PKKVIRKDSAKKTAKKSRVKCFLKLVNFTHIMPTRYTLDVDFKDVASGGPDALATRDKKV 109
Query: 367 RF--NTRVRFEERYKSGKNKWFFQKLRF 444
+ R EER+K+GKN+WFF KLRF
Sbjct: 110 AACKAAKARLEERFKTGKNRWFFTKLRF 137
>08_02_1080 - 24197514-24199415
Length = 633
Score = 35.1 bits (77), Expect = 0.030
Identities = 33/109 (30%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Frame = +1
Query: 118 SRITTKVPPTSRTGMLSSLVSTGTPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRY 297
S ITT P TS + S+ +S RK H + KNK+ SKI + NH +
Sbjct: 523 SPITTWTPSTSNLSISSNELSFSGRRKSHSGVAKNKV--TSKINS--NSYSGNHSAKEKL 578
Query: 298 TVDFSFEKFSAKDL-KDPAKRKKLRFNTRVRFEERYK-SGKNKWFFQKL 438
+ SF K S K +K + + F++R + +G+N W Q+L
Sbjct: 579 PHNSSFAKLSDLSANKWSPFLEKFQDLLQSMFQDRKQTAGRNPWLTQRL 627
>02_04_0433 -
22891261-22891509,22892181-22892301,22892405-22892496,
22892692-22892755,22892855-22892920,22893102-22893193,
22893991-22894050,22894181-22894270,22894484-22894613,
22895066-22895157,22895299-22895373,22895663-22895754,
22896496-22896586,22897541-22897574,22897745-22897791,
22899110-22899209,22899300-22899436,22900837-22901015,
22901146-22901188,22901264-22901297,22901839-22901948,
22902043-22902224,22903062-22903168,22903266-22903480
Length = 833
Score = 34.7 bits (76), Expect = 0.040
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +3
Query: 33 PSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 137
P+K+ + PG V+++L+GRY G++ + +K G
Sbjct: 68 PTKLRSTITPGTVLILLAGRYMGKRVVFLKQLKSG 102
>12_02_0674 - 21745321-21746223,21746229-21747608
Length = 760
Score = 31.1 bits (67), Expect = 0.49
Identities = 24/95 (25%), Positives = 33/95 (34%), Gaps = 2/95 (2%)
Frame = +1
Query: 118 SRITTKVPPTSRTGMLSSLVS--TGTPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPT 291
S T+K+P T RT +LSS S TP KI + P P+
Sbjct: 534 STATSKIPSTPRTSLLSSSTSKIPSTPSTCELSTATGKIPSTTCTSPLSTATGKTSSTPS 593
Query: 292 RYTVDFSFEKFSAKDLKDPAKRKKLRFNTRVRFEE 396
+ S K S+ P ++ T R E
Sbjct: 594 TSPLSTSTSKTSSTPSTSPLSSSTIKIPTTARTGE 628
>04_04_0371 +
24771687-24772081,24772139-24772535,24773394-24773435,
24773571-24774305,24775357-24775480,24775613-24776580,
24776917-24776925
Length = 889
Score = 31.1 bits (67), Expect = 0.49
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -1
Query: 102 DPRTGHLRPALLYPASLSYPSWRDIPLPS 16
DP TG L P + P L++PS +P PS
Sbjct: 614 DPATGSLVPVVSLPEKLTFPSCDGLPTPS 642
>02_04_0140 - 20156655-20156834,20157139-20159345,20159970-20160042
Length = 819
Score = 29.9 bits (64), Expect = 1.1
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -1
Query: 354 FCRVFQVFCAEFFKAEVNCITCWHQVIIVYNLHERLYL 241
F + F+ C ++ EV T W +I YNLH ++L
Sbjct: 378 FIKEFKA-CINDYEEEVEFFTAWEAMISKYNLHNNVWL 414
>10_07_0138 + 13325418-13325954
Length = 178
Score = 28.7 bits (61), Expect = 2.6
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +2
Query: 104 QGYRSQELRRRYLRQAVRACFRRWYRQVPXGKCTRGWERI 223
+G R R R R+ C RRW R +C+R W R+
Sbjct: 82 RGARRCSRRWRRSRRWRSRCSRRWRRSWRRRRCSRRWRRL 121
>04_04_0211 -
23636377-23636532,23636624-23636805,23637853-23637959,
23637997-23638280
Length = 242
Score = 28.7 bits (61), Expect = 2.6
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = +3
Query: 42 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 137
M + PG V+++L+GR+ G++ + +K G
Sbjct: 94 MRSSITPGTVLILLAGRFMGKRVVFLKQLKSG 125
>09_01_0103 -
1628763-1628879,1641827-1642921,1645126-1645476,
1645567-1645734
Length = 576
Score = 28.3 bits (60), Expect = 3.5
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -2
Query: 368 RSFLRFAGSFRSFALNFSKLKSTV*RV 288
RSFL AG +R F NFSK+ ++ R+
Sbjct: 453 RSFLGLAGYYRRFIENFSKIAKSMTRL 479
>05_04_0110 +
18058821-18058900,18059119-18059182,18059351-18059437,
18059521-18059598,18060105-18060201,18060817-18060860,
18061071-18061257,18061324-18061406
Length = 239
Score = 28.3 bits (60), Expect = 3.5
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -3
Query: 301 LYNVLASSDYSLQPSRKALSWT 236
+YN L SSD S + SRK WT
Sbjct: 46 IYNALTSSDQSSKESRKMALWT 67
>12_02_0502 - 19746100-19746185,19746745-19750474
Length = 1271
Score = 27.9 bits (59), Expect = 4.6
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 290 HVIQLTSALKNSAQKT*KTLQNVRSCVSTREYVLK 394
H++ S L N + + + LQNVR+C E LK
Sbjct: 729 HMLSALSTLTNLKRLSLRNLQNVRNCKDAMEIKLK 763
>02_05_0211 -
26800089-26800439,26800458-26800649,26800721-26800792,
26800941-26801126
Length = 266
Score = 27.9 bits (59), Expect = 4.6
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -2
Query: 218 FPILLCTFRGVPVDTSDESMPVRLVG 141
FP+++C R + +D DE M V+ +G
Sbjct: 170 FPLIICNSRDLMIDRYDEMMQVKHLG 195
>02_02_0047 + 6369566-6369661,6369857-6369916,6370320-6370385
Length = 73
Score = 27.9 bits (59), Expect = 4.6
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +2
Query: 128 RRRYLRQAVRACFRRWYRQVPXGKCTRGWE 217
RRR L ++ CF+ WY + C+ G E
Sbjct: 30 RRRVLYYRMKPCFQIWYETIRIQLCSTGVE 59
>10_05_0026 + 8262237-8262899,8263300-8263509,8263599-8265480,
8265508-8265704,8275672-8275824
Length = 1034
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -2
Query: 368 RSFLRFAGSFRSFALNFSKLKSTV*RV 288
RSFL AG +R F NFSK+ + R+
Sbjct: 954 RSFLGLAGYYRRFIENFSKIDKPMTRL 980
>08_02_0167 -
13564466-13566227,13566361-13566644,13566684-13567540,
13567684-13567957,13567973-13568218
Length = 1140
Score = 27.5 bits (58), Expect = 6.0
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -2
Query: 368 RSFLRFAGSFRSFALNFSKL 309
RSFL AG +R F NFSK+
Sbjct: 505 RSFLGLAGYYRRFIKNFSKI 524
>08_01_0441 + 3890231-3890845,3891253-3894220,3906625-3906713,
3908317-3908337
Length = 1230
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -2
Query: 368 RSFLRFAGSFRSFALNFSKLKSTV*RV 288
RSFL AG +R F NFSK+ + R+
Sbjct: 985 RSFLGLAGYYRRFIENFSKIAKPMTRL 1011
>04_03_0925 -
20856628-20856690,20856786-20856845,20856924-20857001,
20857127-20857192,20857542-20858675,20858991-20860283
Length = 897
Score = 27.5 bits (58), Expect = 6.0
Identities = 9/30 (30%), Positives = 17/30 (56%)
Frame = -1
Query: 330 CAEFFKAEVNCITCWHQVIIVYNLHERLYL 241
C ++ E +T W +I +NLH+ ++L
Sbjct: 436 CINLYEEETEFLTSWDAMINKHNLHDNVWL 465
>04_03_0540 +
16929782-16929834,16929937-16930032,16930111-16930185,
16930819-16930893,16930987-16931209,16931303-16931546,
16932111-16932568,16932647-16932928,16933032-16933733
Length = 735
Score = 27.5 bits (58), Expect = 6.0
Identities = 15/54 (27%), Positives = 24/54 (44%)
Frame = -1
Query: 357 TFCRVFQVFCAEFFKAEVNCITCWHQVIIVYNLHERLYLGPLVDFILSHPLVHF 196
TF + F + E + WH++I YNL + +YL + D V+F
Sbjct: 298 TFKKAFHKVLTQTLTEE-EFVAAWHKLIRDYNLEKSVYLRHIWDIRRKWAFVYF 350
>01_06_1350 +
36505926-36505978,36506081-36506176,36506255-36506329,
36506964-36507038,36507132-36507348,36507442-36507685,
36508250-36508707,36508786-36509067,36509171-36509872
Length = 733
Score = 27.5 bits (58), Expect = 6.0
Identities = 15/54 (27%), Positives = 24/54 (44%)
Frame = -1
Query: 357 TFCRVFQVFCAEFFKAEVNCITCWHQVIIVYNLHERLYLGPLVDFILSHPLVHF 196
TF + F + E + WH++I YNL + +YL + D V+F
Sbjct: 296 TFKKAFHKVLTQTLTEE-EFVAAWHKLIRDYNLEKSVYLRHIWDIRRKWAFVYF 348
>10_02_0059 + 4785858-4786988
Length = 376
Score = 27.1 bits (57), Expect = 8.0
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -2
Query: 368 RSFLRFAGSFRSFALNFSKL 309
RSFL AG +R F NFSK+
Sbjct: 224 RSFLGLAGYYRRFIENFSKI 243
>09_04_0061 - 14256767-14256845,14256862-14257224,14260846-14261555
Length = 383
Score = 27.1 bits (57), Expect = 8.0
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -2
Query: 368 RSFLRFAGSFRSFALNFSKL 309
RSFL AG +R F NFSK+
Sbjct: 281 RSFLGLAGYYRRFIENFSKI 300
>09_02_0555 - 10588685-10592038
Length = 1117
Score = 27.1 bits (57), Expect = 8.0
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -2
Query: 368 RSFLRFAGSFRSFALNFSKL 309
RSFL AG +R F NFSK+
Sbjct: 411 RSFLGLAGYYRRFIENFSKI 430
>07_03_1512 + 27288779-27289222,27298101-27298399,27298499-27298589,
27298701-27298766,27299151-27302660,27311604-27312224
Length = 1676
Score = 27.1 bits (57), Expect = 8.0
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -2
Query: 368 RSFLRFAGSFRSFALNFSKL 309
RSFL AG +R F NFSK+
Sbjct: 1071 RSFLGLAGYYRRFIENFSKI 1090
>03_02_1029 - 13488535-13493037
Length = 1500
Score = 27.1 bits (57), Expect = 8.0
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -2
Query: 368 RSFLRFAGSFRSFALNFSKL 309
RSFL AG +R F NFSK+
Sbjct: 794 RSFLGLAGYYRRFIENFSKI 813
>01_01_0469 -
3456067-3456123,3456414-3456565,3456649-3456779,
3456846-3458036,3458460-3458541,3458947-3458984,
3459091-3459250,3459356-3459557,3460245-3460329,
3460809-3460863,3461230-3461325,3461807-3461940,
3462031-3462043,3462315-3462419,3462935-3463121
Length = 895
Score = 27.1 bits (57), Expect = 8.0
Identities = 17/63 (26%), Positives = 24/63 (38%)
Frame = +1
Query: 193 RKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSAKDLKDPAKRKKLRF 372
R H R+ N + S+ ++ N PT F + KD P +R R
Sbjct: 292 RSKHGRLDDNLTDENSERLWKMEPFNSEDRFPTPIVEQFDTRDYGFKDRYSPEQRTSTRT 351
Query: 373 NTR 381
NTR
Sbjct: 352 NTR 354
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,952,540
Number of Sequences: 37544
Number of extensions: 264014
Number of successful extensions: 788
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 762
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 786
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 999806640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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