Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0444
(486 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L19527-1|AAA19815.1| 136|Homo sapiens ribosomal protein L27 pro... 119 5e-27
L05094-1|AAC15857.1| 136|Homo sapiens ribosomal protein L27 pro... 119 5e-27
BC098560-1|AAH98560.1| 136|Homo sapiens ribosomal protein L27 p... 119 5e-27
BC021886-1|AAH21886.1| 140|Homo sapiens RPL27 protein protein. 119 5e-27
BC010026-1|AAH10026.1| 136|Homo sapiens ribosomal protein L27 p... 119 5e-27
BC007273-1|AAH07273.1| 136|Homo sapiens ribosomal protein L27 p... 119 5e-27
BC002588-1|AAH02588.1| 136|Homo sapiens ribosomal protein L27 p... 119 5e-27
BC001700-1|AAH01700.1| 136|Homo sapiens ribosomal protein L27 p... 119 5e-27
AB061851-1|BAB79492.1| 136|Homo sapiens ribosomal protein L27 p... 119 5e-27
U25752-1|AAA93226.1| 40|Homo sapiens ribosomal protein L27 pro... 60 3e-09
Y18265-1|CAB41400.1| 1324|Homo sapiens zinc finger protein SALL1... 30 5.0
Y18264-1|CAB41399.1| 1324|Homo sapiens zinc finger protein SALL1... 30 5.0
BC033805-1|AAH33805.1| 548|Homo sapiens solute carrier family 2... 29 6.6
AY050498-1|AAL12496.1| 548|Homo sapiens organic anion transport... 29 6.6
AL583834-7|CAI14466.1| 211|Homo sapiens solute carrier family 2... 29 6.6
AL583834-4|CAI14464.1| 546|Homo sapiens solute carrier family 2... 29 6.6
AL583834-3|CAI14463.1| 548|Homo sapiens solute carrier family 2... 29 6.6
AL583834-2|CAI14462.1| 539|Homo sapiens solute carrier family 2... 29 6.6
AF210455-1|AAG43523.1| 539|Homo sapiens organic anion transport... 29 6.6
AF097518-1|AAD37091.1| 548|Homo sapiens liver-specific transpor... 29 6.6
AB065857-1|BAC06075.1| 315|Homo sapiens seven transmembrane hel... 29 6.6
X69391-1|CAA49188.1| 288|Homo sapiens ribosomal protein L6 prot... 29 8.7
S71022-1|AAB30819.1| 207|Homo sapiens neoplasm-related C140 pro... 29 8.7
D17554-1|BAA04491.1| 288|Homo sapiens DNA-binding protein TAXRE... 29 8.7
BC104826-1|AAI04827.1| 288|Homo sapiens ribosomal protein L6 pr... 29 8.7
BC104824-1|AAI04825.1| 288|Homo sapiens ribosomal protein L6 pr... 29 8.7
BC071912-1|AAH71912.1| 288|Homo sapiens ribosomal protein L6 pr... 29 8.7
BC032299-1|AAH32299.1| 288|Homo sapiens ribosomal protein L6 pr... 29 8.7
BC031009-1|AAH31009.1| 288|Homo sapiens ribosomal protein L6 pr... 29 8.7
BC022444-1|AAH22444.1| 288|Homo sapiens ribosomal protein L6 pr... 29 8.7
BC020679-1|AAH20679.1| 288|Homo sapiens ribosomal protein L6 pr... 29 8.7
BC004138-1|AAH04138.1| 288|Homo sapiens ribosomal protein L6 pr... 29 8.7
AB042820-1|BAB17292.1| 288|Homo sapiens ribosomal protein L6 pr... 29 8.7
>L19527-1|AAA19815.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 119 bits (287), Expect = 5e-27
Identities = 58/87 (66%), Positives = 67/87 (77%), Gaps = 2/87 (2%)
Frame = +1
Query: 190 PRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSA-KDL-KDPAKRKK 363
PRKV MGK KI KRSKIK FVKV NYNHLMPTRY+VD +K KD+ +DPA ++K
Sbjct: 50 PRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRK 109
Query: 364 LRFNTRVRFEERYKSGKNKWFFQKLRF 444
R +V+FEERYK+GKNKWFFQKLRF
Sbjct: 110 ARREAKVKFEERYKTGKNKWFFQKLRF 136
Score = 96.7 bits (230), Expect = 4e-20
Identities = 44/71 (61%), Positives = 55/71 (77%)
Frame = +3
Query: 42 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPXESAQEDGKE 221
MGK MKPGKVVLVL+GRY+GRKA++VKN D+GTSD+PY HA VAGIDRYP + GK+
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 222 *NPQEVQDKAF 254
+ + K+F
Sbjct: 61 KIAKRSKIKSF 71
>L05094-1|AAC15857.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 119 bits (287), Expect = 5e-27
Identities = 58/87 (66%), Positives = 67/87 (77%), Gaps = 2/87 (2%)
Frame = +1
Query: 190 PRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSA-KDL-KDPAKRKK 363
PRKV MGK KI KRSKIK FVKV NYNHLMPTRY+VD +K KD+ +DPA ++K
Sbjct: 50 PRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRK 109
Query: 364 LRFNTRVRFEERYKSGKNKWFFQKLRF 444
R +V+FEERYK+GKNKWFFQKLRF
Sbjct: 110 ARREAKVKFEERYKTGKNKWFFQKLRF 136
Score = 96.7 bits (230), Expect = 4e-20
Identities = 44/71 (61%), Positives = 55/71 (77%)
Frame = +3
Query: 42 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPXESAQEDGKE 221
MGK MKPGKVVLVL+GRY+GRKA++VKN D+GTSD+PY HA VAGIDRYP + GK+
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 222 *NPQEVQDKAF 254
+ + K+F
Sbjct: 61 KIAKRSKIKSF 71
>BC098560-1|AAH98560.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 119 bits (287), Expect = 5e-27
Identities = 58/87 (66%), Positives = 67/87 (77%), Gaps = 2/87 (2%)
Frame = +1
Query: 190 PRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSA-KDL-KDPAKRKK 363
PRKV MGK KI KRSKIK FVKV NYNHLMPTRY+VD +K KD+ +DPA ++K
Sbjct: 50 PRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRK 109
Query: 364 LRFNTRVRFEERYKSGKNKWFFQKLRF 444
R +V+FEERYK+GKNKWFFQKLRF
Sbjct: 110 ARREAKVKFEERYKTGKNKWFFQKLRF 136
Score = 96.7 bits (230), Expect = 4e-20
Identities = 44/71 (61%), Positives = 55/71 (77%)
Frame = +3
Query: 42 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPXESAQEDGKE 221
MGK MKPGKVVLVL+GRY+GRKA++VKN D+GTSD+PY HA VAGIDRYP + GK+
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 222 *NPQEVQDKAF 254
+ + K+F
Sbjct: 61 KIAKRSKIKSF 71
>BC021886-1|AAH21886.1| 140|Homo sapiens RPL27 protein protein.
Length = 140
Score = 119 bits (287), Expect = 5e-27
Identities = 58/87 (66%), Positives = 67/87 (77%), Gaps = 2/87 (2%)
Frame = +1
Query: 190 PRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSA-KDL-KDPAKRKK 363
PRKV MGK KI KRSKIK FVKV NYNHLMPTRY+VD +K KD+ +DPA ++K
Sbjct: 54 PRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRK 113
Query: 364 LRFNTRVRFEERYKSGKNKWFFQKLRF 444
R +V+FEERYK+GKNKWFFQKLRF
Sbjct: 114 ARREAKVKFEERYKTGKNKWFFQKLRF 140
Score = 75.8 bits (178), Expect = 8e-14
Identities = 34/60 (56%), Positives = 45/60 (75%)
Frame = +3
Query: 75 LVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPXESAQEDGKE*NPQEVQDKAF 254
LVL+GRY+GRKA++VKN D+GTSD+PY HA VAGIDRYP + GK+ + + K+F
Sbjct: 16 LVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSF 75
>BC010026-1|AAH10026.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 119 bits (287), Expect = 5e-27
Identities = 58/87 (66%), Positives = 67/87 (77%), Gaps = 2/87 (2%)
Frame = +1
Query: 190 PRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSA-KDL-KDPAKRKK 363
PRKV MGK KI KRSKIK FVKV NYNHLMPTRY+VD +K KD+ +DPA ++K
Sbjct: 50 PRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRK 109
Query: 364 LRFNTRVRFEERYKSGKNKWFFQKLRF 444
R +V+FEERYK+GKNKWFFQKLRF
Sbjct: 110 ARREAKVKFEERYKTGKNKWFFQKLRF 136
Score = 96.7 bits (230), Expect = 4e-20
Identities = 44/71 (61%), Positives = 55/71 (77%)
Frame = +3
Query: 42 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPXESAQEDGKE 221
MGK MKPGKVVLVL+GRY+GRKA++VKN D+GTSD+PY HA VAGIDRYP + GK+
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 222 *NPQEVQDKAF 254
+ + K+F
Sbjct: 61 KIAKRSKIKSF 71
>BC007273-1|AAH07273.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 119 bits (287), Expect = 5e-27
Identities = 58/87 (66%), Positives = 67/87 (77%), Gaps = 2/87 (2%)
Frame = +1
Query: 190 PRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSA-KDL-KDPAKRKK 363
PRKV MGK KI KRSKIK FVKV NYNHLMPTRY+VD +K KD+ +DPA ++K
Sbjct: 50 PRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRK 109
Query: 364 LRFNTRVRFEERYKSGKNKWFFQKLRF 444
R +V+FEERYK+GKNKWFFQKLRF
Sbjct: 110 ARREAKVKFEERYKTGKNKWFFQKLRF 136
Score = 96.7 bits (230), Expect = 4e-20
Identities = 44/71 (61%), Positives = 55/71 (77%)
Frame = +3
Query: 42 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPXESAQEDGKE 221
MGK MKPGKVVLVL+GRY+GRKA++VKN D+GTSD+PY HA VAGIDRYP + GK+
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 222 *NPQEVQDKAF 254
+ + K+F
Sbjct: 61 KIAKRSKIKSF 71
>BC002588-1|AAH02588.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 119 bits (287), Expect = 5e-27
Identities = 58/87 (66%), Positives = 67/87 (77%), Gaps = 2/87 (2%)
Frame = +1
Query: 190 PRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSA-KDL-KDPAKRKK 363
PRKV MGK KI KRSKIK FVKV NYNHLMPTRY+VD +K KD+ +DPA ++K
Sbjct: 50 PRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRK 109
Query: 364 LRFNTRVRFEERYKSGKNKWFFQKLRF 444
R +V+FEERYK+GKNKWFFQKLRF
Sbjct: 110 ARREAKVKFEERYKTGKNKWFFQKLRF 136
Score = 96.7 bits (230), Expect = 4e-20
Identities = 44/71 (61%), Positives = 55/71 (77%)
Frame = +3
Query: 42 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPXESAQEDGKE 221
MGK MKPGKVVLVL+GRY+GRKA++VKN D+GTSD+PY HA VAGIDRYP + GK+
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 222 *NPQEVQDKAF 254
+ + K+F
Sbjct: 61 KIAKRSKIKSF 71
>BC001700-1|AAH01700.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 119 bits (287), Expect = 5e-27
Identities = 58/87 (66%), Positives = 67/87 (77%), Gaps = 2/87 (2%)
Frame = +1
Query: 190 PRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSA-KDL-KDPAKRKK 363
PRKV MGK KI KRSKIK FVKV NYNHLMPTRY+VD +K KD+ +DPA ++K
Sbjct: 50 PRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRK 109
Query: 364 LRFNTRVRFEERYKSGKNKWFFQKLRF 444
R +V+FEERYK+GKNKWFFQKLRF
Sbjct: 110 ARREAKVKFEERYKTGKNKWFFQKLRF 136
Score = 96.7 bits (230), Expect = 4e-20
Identities = 44/71 (61%), Positives = 55/71 (77%)
Frame = +3
Query: 42 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPXESAQEDGKE 221
MGK MKPGKVVLVL+GRY+GRKA++VKN D+GTSD+PY HA VAGIDRYP + GK+
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 222 *NPQEVQDKAF 254
+ + K+F
Sbjct: 61 KIAKRSKIKSF 71
>AB061851-1|BAB79492.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 119 bits (287), Expect = 5e-27
Identities = 58/87 (66%), Positives = 67/87 (77%), Gaps = 2/87 (2%)
Frame = +1
Query: 190 PRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSA-KDL-KDPAKRKK 363
PRKV MGK KI KRSKIK FVKV NYNHLMPTRY+VD +K KD+ +DPA ++K
Sbjct: 50 PRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRK 109
Query: 364 LRFNTRVRFEERYKSGKNKWFFQKLRF 444
R +V+FEERYK+GKNKWFFQKLRF
Sbjct: 110 ARREAKVKFEERYKTGKNKWFFQKLRF 136
Score = 96.7 bits (230), Expect = 4e-20
Identities = 44/71 (61%), Positives = 55/71 (77%)
Frame = +3
Query: 42 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPXESAQEDGKE 221
MGK MKPGKVVLVL+GRY+GRKA++VKN D+GTSD+PY HA VAGIDRYP + GK+
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 222 *NPQEVQDKAF 254
+ + K+F
Sbjct: 61 KIAKRSKIKSF 71
>U25752-1|AAA93226.1| 40|Homo sapiens ribosomal protein L27
protein.
Length = 40
Score = 60.5 bits (140), Expect = 3e-09
Identities = 26/39 (66%), Positives = 33/39 (84%), Gaps = 1/39 (2%)
Frame = +1
Query: 331 KDL-KDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKLRF 444
KD+ +DPA ++K R +V+FEERYK+GKNKWFFQKLRF
Sbjct: 2 KDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 40
>Y18265-1|CAB41400.1| 1324|Homo sapiens zinc finger protein SALL1
protein.
Length = 1324
Score = 29.9 bits (64), Expect = 5.0
Identities = 19/59 (32%), Positives = 26/59 (44%)
Frame = -3
Query: 181 SIPATKACPYGLSEVPSS*FLTTIALRPAYRPLKTSTTLPGFIILPILEGYSLTLVPIP 5
+IP + PYG+S P + + +P L TS LP LP L + T P P
Sbjct: 519 NIPTSTGIPYGMSIPPEKPVTSWLDTKPVLPTLTTSVGLPLPPSLPSLIPFIKTEEPAP 577
>Y18264-1|CAB41399.1| 1324|Homo sapiens zinc finger protein SALL1
protein.
Length = 1324
Score = 29.9 bits (64), Expect = 5.0
Identities = 19/59 (32%), Positives = 26/59 (44%)
Frame = -3
Query: 181 SIPATKACPYGLSEVPSS*FLTTIALRPAYRPLKTSTTLPGFIILPILEGYSLTLVPIP 5
+IP + PYG+S P + + +P L TS LP LP L + T P P
Sbjct: 519 NIPTSTGIPYGMSIPPEKPVTSWLDTKPVLPTLTTSVGLPLPPSLPSLIPFIKTEEPAP 577
>BC033805-1|AAH33805.1| 548|Homo sapiens solute carrier family 22
(organic anion transporter), member 7 protein.
Length = 548
Score = 29.5 bits (63), Expect = 6.6
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +3
Query: 3 AGIGTRVREYPSKMGKIMKPGKVVLVLSGRYAGRK 107
+G+G V + G + P K+++ LS RYAGR+
Sbjct: 369 SGLGLNVYQTQLLFGAVELPSKLLVYLSVRYAGRR 403
>AY050498-1|AAL12496.1| 548|Homo sapiens organic anion transporter
2 protein.
Length = 548
Score = 29.5 bits (63), Expect = 6.6
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +3
Query: 3 AGIGTRVREYPSKMGKIMKPGKVVLVLSGRYAGRK 107
+G+G V + G + P K+++ LS RYAGR+
Sbjct: 369 SGLGLNVYQTQLLFGAVELPSKLLVYLSVRYAGRR 403
>AL583834-7|CAI14466.1| 211|Homo sapiens solute carrier family 22
(organic anion transporter), member 7 protein.
Length = 211
Score = 29.5 bits (63), Expect = 6.6
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +3
Query: 3 AGIGTRVREYPSKMGKIMKPGKVVLVLSGRYAGRK 107
+G+G V + G + P K+++ LS RYAGR+
Sbjct: 62 SGLGLNVYQTQLLFGAVELPSKLLVYLSVRYAGRR 96
>AL583834-4|CAI14464.1| 546|Homo sapiens solute carrier family 22
(organic anion transporter), member 7 protein.
Length = 546
Score = 29.5 bits (63), Expect = 6.6
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +3
Query: 3 AGIGTRVREYPSKMGKIMKPGKVVLVLSGRYAGRK 107
+G+G V + G + P K+++ LS RYAGR+
Sbjct: 367 SGLGLNVYQTQLLFGAVELPSKLLVYLSVRYAGRR 401
>AL583834-3|CAI14463.1| 548|Homo sapiens solute carrier family 22
(organic anion transporter), member 7 protein.
Length = 548
Score = 29.5 bits (63), Expect = 6.6
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +3
Query: 3 AGIGTRVREYPSKMGKIMKPGKVVLVLSGRYAGRK 107
+G+G V + G + P K+++ LS RYAGR+
Sbjct: 369 SGLGLNVYQTQLLFGAVELPSKLLVYLSVRYAGRR 403
>AL583834-2|CAI14462.1| 539|Homo sapiens solute carrier family 22
(organic anion transporter), member 7 protein.
Length = 539
Score = 29.5 bits (63), Expect = 6.6
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +3
Query: 3 AGIGTRVREYPSKMGKIMKPGKVVLVLSGRYAGRK 107
+G+G V + G + P K+++ LS RYAGR+
Sbjct: 367 SGLGLNVYQTQLLFGAVELPSKLLVYLSVRYAGRR 401
>AF210455-1|AAG43523.1| 539|Homo sapiens organic anion transporter
2 protein.
Length = 539
Score = 29.5 bits (63), Expect = 6.6
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +3
Query: 3 AGIGTRVREYPSKMGKIMKPGKVVLVLSGRYAGRK 107
+G+G V + G + P K+++ LS RYAGR+
Sbjct: 367 SGLGLNVYQTQLLFGAVELPSKLLVYLSVRYAGRR 401
>AF097518-1|AAD37091.1| 548|Homo sapiens liver-specific transporter
protein.
Length = 548
Score = 29.5 bits (63), Expect = 6.6
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +3
Query: 3 AGIGTRVREYPSKMGKIMKPGKVVLVLSGRYAGRK 107
+G+G V + G + P K+++ LS RYAGR+
Sbjct: 369 SGLGLNVYQTQLLFGAVELPSKLLVYLSVRYAGRR 403
>AB065857-1|BAC06075.1| 315|Homo sapiens seven transmembrane helix
receptor protein.
Length = 315
Score = 29.5 bits (63), Expect = 6.6
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -1
Query: 333 FCAEFFKAEVNCITCWHQVIIVYNLHERLYL 241
FCA + A V IT H + I + LHE +YL
Sbjct: 34 FCATYAVAVVGNITLLHVIRIDHTLHEPMYL 64
>X69391-1|CAA49188.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 29.1 bits (62), Expect = 8.7
Identities = 9/37 (24%), Positives = 23/37 (62%)
Frame = +3
Query: 27 EYPSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 137
++ K+ + PG ++++L+GR+ G++ + +K G
Sbjct: 135 QHVRKLRASITPGTILIILTGRHRGKRVVFLKQLASG 171
>S71022-1|AAB30819.1| 207|Homo sapiens neoplasm-related C140
product protein.
Length = 207
Score = 29.1 bits (62), Expect = 8.7
Identities = 9/37 (24%), Positives = 23/37 (62%)
Frame = +3
Query: 27 EYPSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 137
++ K+ + PG ++++L+GR+ G++ + +K G
Sbjct: 74 QHVRKLRASITPGTILIILTGRHRGKRVVFLKQLASG 110
>D17554-1|BAA04491.1| 288|Homo sapiens DNA-binding protein
TAXREB107 protein.
Length = 288
Score = 29.1 bits (62), Expect = 8.7
Identities = 9/37 (24%), Positives = 23/37 (62%)
Frame = +3
Query: 27 EYPSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 137
++ K+ + PG ++++L+GR+ G++ + +K G
Sbjct: 135 QHVRKLRASITPGTILIILTGRHRGKRVVFLKQLASG 171
>BC104826-1|AAI04827.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 29.1 bits (62), Expect = 8.7
Identities = 9/37 (24%), Positives = 23/37 (62%)
Frame = +3
Query: 27 EYPSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 137
++ K+ + PG ++++L+GR+ G++ + +K G
Sbjct: 135 QHVRKLRASITPGTILIILTGRHRGKRVVFLKQLASG 171
>BC104824-1|AAI04825.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 29.1 bits (62), Expect = 8.7
Identities = 9/37 (24%), Positives = 23/37 (62%)
Frame = +3
Query: 27 EYPSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 137
++ K+ + PG ++++L+GR+ G++ + +K G
Sbjct: 135 QHVRKLRASITPGTILIILTGRHRGKRVVFLKQLASG 171
>BC071912-1|AAH71912.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 29.1 bits (62), Expect = 8.7
Identities = 9/37 (24%), Positives = 23/37 (62%)
Frame = +3
Query: 27 EYPSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 137
++ K+ + PG ++++L+GR+ G++ + +K G
Sbjct: 135 QHVRKLRASITPGTILIILTGRHRGKRVVFLKQLASG 171
>BC032299-1|AAH32299.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 29.1 bits (62), Expect = 8.7
Identities = 9/37 (24%), Positives = 23/37 (62%)
Frame = +3
Query: 27 EYPSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 137
++ K+ + PG ++++L+GR+ G++ + +K G
Sbjct: 135 QHVRKLRASITPGTILIILTGRHRGKRVVFLKQLASG 171
>BC031009-1|AAH31009.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 29.1 bits (62), Expect = 8.7
Identities = 9/37 (24%), Positives = 23/37 (62%)
Frame = +3
Query: 27 EYPSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 137
++ K+ + PG ++++L+GR+ G++ + +K G
Sbjct: 135 QHVRKLRASITPGTILIILTGRHRGKRVVFLKQLASG 171
>BC022444-1|AAH22444.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 29.1 bits (62), Expect = 8.7
Identities = 9/37 (24%), Positives = 23/37 (62%)
Frame = +3
Query: 27 EYPSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 137
++ K+ + PG ++++L+GR+ G++ + +K G
Sbjct: 135 QHVRKLRASITPGTILIILTGRHRGKRVVFLKQLASG 171
>BC020679-1|AAH20679.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 29.1 bits (62), Expect = 8.7
Identities = 9/37 (24%), Positives = 23/37 (62%)
Frame = +3
Query: 27 EYPSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 137
++ K+ + PG ++++L+GR+ G++ + +K G
Sbjct: 135 QHVRKLRASITPGTILIILTGRHRGKRVVFLKQLASG 171
>BC004138-1|AAH04138.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 29.1 bits (62), Expect = 8.7
Identities = 9/37 (24%), Positives = 23/37 (62%)
Frame = +3
Query: 27 EYPSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 137
++ K+ + PG ++++L+GR+ G++ + +K G
Sbjct: 135 QHVRKLRASITPGTILIILTGRHRGKRVVFLKQLASG 171
>AB042820-1|BAB17292.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 29.1 bits (62), Expect = 8.7
Identities = 9/37 (24%), Positives = 23/37 (62%)
Frame = +3
Query: 27 EYPSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 137
++ K+ + PG ++++L+GR+ G++ + +K G
Sbjct: 135 QHVRKLRASITPGTILIILTGRHRGKRVVFLKQLASG 171
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,903,289
Number of Sequences: 237096
Number of extensions: 1447943
Number of successful extensions: 3179
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 3059
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3166
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4384610846
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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