Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0444
         (486 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070827-1|AAL48449.1|  135|Drosophila melanogaster AT27980p pro...   140   7e-34
AE014297-3837|AAF56495.1|  135|Drosophila melanogaster CG4759-PA...   140   7e-34
AE013599-1694|AAF58382.1|  506|Drosophila melanogaster CG17050-P...    33   0.27 
AY070994-1|AAL48616.1|  262|Drosophila melanogaster RE08669p pro...    28   7.8  
AE014297-4764|AAF57167.1|  262|Drosophila melanogaster CG11522-P...    28   7.8  
AE014297-4763|AAF57166.1|  243|Drosophila melanogaster CG11522-P...    28   7.8  

>AY070827-1|AAL48449.1|  135|Drosophila melanogaster AT27980p
           protein.
          Length = 135

 Score =  140 bits (340), Expect = 7e-34
 Identities = 64/86 (74%), Positives = 71/86 (82%), Gaps = 1/86 (1%)
 Frame = +1

Query: 190 PRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTV-DFSFEKFSAKDLKDPAKRKKL 366
           PRKV K+MGKNK+ K+SK+KPF+K +NYNHLMPTRYT  D SFEK S KDLKDP KRK  
Sbjct: 50  PRKVTKKMGKNKLKKKSKVKPFLKSLNYNHLMPTRYTAHDISFEKLSPKDLKDPVKRKTH 109

Query: 367 RFNTRVRFEERYKSGKNKWFFQKLRF 444
           RF TRV+FE  YK GKNKWFFQKLRF
Sbjct: 110 RFQTRVKFESVYKEGKNKWFFQKLRF 135



 Score = 91.5 bits (217), Expect = 6e-19
 Identities = 40/59 (67%), Positives = 50/59 (84%)
 Frame = +3

Query: 42  MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPXESAQEDGK 218
           M KIMK GK+V+VLSGRYAGRKAI+VK +D+GT +KP+GHA VAGIDRYP +  ++ GK
Sbjct: 1   MRKIMKQGKIVIVLSGRYAGRKAIIVKTHDDGTPEKPFGHALVAGIDRYPRKVTKKMGK 59


>AE014297-3837|AAF56495.1|  135|Drosophila melanogaster CG4759-PA
           protein.
          Length = 135

 Score =  140 bits (340), Expect = 7e-34
 Identities = 64/86 (74%), Positives = 71/86 (82%), Gaps = 1/86 (1%)
 Frame = +1

Query: 190 PRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTV-DFSFEKFSAKDLKDPAKRKKL 366
           PRKV K+MGKNK+ K+SK+KPF+K +NYNHLMPTRYT  D SFEK S KDLKDP KRK  
Sbjct: 50  PRKVTKKMGKNKLKKKSKVKPFLKSLNYNHLMPTRYTAHDISFEKLSPKDLKDPVKRKTH 109

Query: 367 RFNTRVRFEERYKSGKNKWFFQKLRF 444
           RF TRV+FE  YK GKNKWFFQKLRF
Sbjct: 110 RFQTRVKFESVYKEGKNKWFFQKLRF 135



 Score = 91.5 bits (217), Expect = 6e-19
 Identities = 40/59 (67%), Positives = 50/59 (84%)
 Frame = +3

Query: 42  MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPXESAQEDGK 218
           M KIMK GK+V+VLSGRYAGRKAI+VK +D+GT +KP+GHA VAGIDRYP +  ++ GK
Sbjct: 1   MRKIMKQGKIVIVLSGRYAGRKAIIVKTHDDGTPEKPFGHALVAGIDRYPRKVTKKMGK 59


>AE013599-1694|AAF58382.1|  506|Drosophila melanogaster CG17050-PA
           protein.
          Length = 506

 Score = 32.7 bits (71), Expect = 0.27
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = +1

Query: 286 PTRYTVDFSFEKFSAKDLKDPAKRKKLRF 372
           P  Y  +F FE+F  KDL+  AK K L+F
Sbjct: 60  PKPYVKEFEFERFHLKDLRSDAKFKHLQF 88


>AY070994-1|AAL48616.1|  262|Drosophila melanogaster RE08669p
           protein.
          Length = 262

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 9/32 (28%), Positives = 22/32 (68%)
 Frame = +3

Query: 27  EYPSKMGKIMKPGKVVLVLSGRYAGRKAIVVK 122
           E+     + + PG V+++L+GR+ G++ +++K
Sbjct: 105 EHKRNTRRNLTPGTVLILLAGRHQGKRVVLLK 136


>AE014297-4764|AAF57167.1|  262|Drosophila melanogaster CG11522-PB,
           isoform B protein.
          Length = 262

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 9/32 (28%), Positives = 22/32 (68%)
 Frame = +3

Query: 27  EYPSKMGKIMKPGKVVLVLSGRYAGRKAIVVK 122
           E+     + + PG V+++L+GR+ G++ +++K
Sbjct: 105 EHKRNTRRNLTPGTVLILLAGRHQGKRVVLLK 136


>AE014297-4763|AAF57166.1|  243|Drosophila melanogaster CG11522-PA,
           isoform A protein.
          Length = 243

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 9/32 (28%), Positives = 22/32 (68%)
 Frame = +3

Query: 27  EYPSKMGKIMKPGKVVLVLSGRYAGRKAIVVK 122
           E+     + + PG V+++L+GR+ G++ +++K
Sbjct: 86  EHKRNTRRNLTPGTVLILLAGRHQGKRVVLLK 117


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,236,922
Number of Sequences: 53049
Number of extensions: 425927
Number of successful extensions: 1143
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1141
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1705394754
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)