Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0443
         (364 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U97008-19|AAB52318.2|  375|Caenorhabditis elegans Serpin protein...    31   0.25 
U97008-18|AAB52317.2|  115|Caenorhabditis elegans Serpin protein...    31   0.25 
AY525082-1|AAS13530.1|  375|Caenorhabditis elegans serine or cys...    31   0.25 
U50301-7|AAB37055.1|  366|Caenorhabditis elegans Serpin protein ...    30   0.57 
U50301-6|AAT81198.1|  366|Caenorhabditis elegans Serpin protein ...    30   0.57 
AY525084-1|AAS13532.1|  366|Caenorhabditis elegans serine or cys...    30   0.57 
AY525083-1|AAS13531.1|  366|Caenorhabditis elegans serine or cys...    30   0.57 
Z81571-4|CAB04614.1|  268|Caenorhabditis elegans Hypothetical pr...    29   1.00 
Z81571-2|CAB04611.1|  202|Caenorhabditis elegans Hypothetical pr...    29   1.00 
U41026-4|AAA82351.2|  265|Caenorhabditis elegans Hypothetical pr...    29   1.00 
Z81528-6|CAB04285.1|  633|Caenorhabditis elegans Hypothetical pr...    28   2.3  
Z81595-2|CAB04749.1|  527|Caenorhabditis elegans Hypothetical pr...    27   3.0  
AY525079-1|AAS13528.1|  359|Caenorhabditis elegans serine or cys...    27   3.0  
AF026209-15|AAB71270.1|  359|Caenorhabditis elegans Serpin prote...    27   3.0  
U62639-1|AAD09364.1|  925|Caenorhabditis elegans lr protein.           27   4.0  
U62281-1|AAD09363.1|  925|Caenorhabditis elegans lipoprotein rec...    27   4.0  
AF185706-1|AAD56241.1|  925|Caenorhabditis elegans yolk receptor...    27   4.0  
AF036703-1|AAB88554.3|  925|Caenorhabditis elegans Receptor medi...    27   4.0  
AY525078-1|AAS13527.1|  366|Caenorhabditis elegans serine or cys...    26   7.0  
AF026209-12|AAB71272.1|  366|Caenorhabditis elegans Serpin prote...    26   7.0  
Z81492-4|CAB04031.1|  624|Caenorhabditis elegans Hypothetical pr...    26   9.3  
AY525080-1|AAS13529.1|  362|Caenorhabditis elegans serine or cys...    26   9.3  
AC087794-5|AAM48555.1|  362|Caenorhabditis elegans Serpin protei...    26   9.3  

>U97008-19|AAB52318.2|  375|Caenorhabditis elegans Serpin protein 6
           protein.
          Length = 375

 Score = 31.1 bits (67), Expect = 0.25
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +3

Query: 153 QPLVFKANHPFVFFLKGDGVTLFNGV 230
           +P+ F A+HPF+F L  D   LF G+
Sbjct: 348 EPIEFTADHPFLFILSKDNHPLFIGI 373


>U97008-18|AAB52317.2|  115|Caenorhabditis elegans Serpin protein 5
           protein.
          Length = 115

 Score = 31.1 bits (67), Expect = 0.25
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +3

Query: 153 QPLVFKANHPFVFFLKGDGVTLFNGV 230
           +P+ F A+HPF+F L  D   LF GV
Sbjct: 88  KPIEFTADHPFLFILSKDNHPLFIGV 113


>AY525082-1|AAS13530.1|  375|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 375

 Score = 31.1 bits (67), Expect = 0.25
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +3

Query: 153 QPLVFKANHPFVFFLKGDGVTLFNGV 230
           +P+ F A+HPF+F L  D   LF G+
Sbjct: 348 EPIEFTADHPFLFILSKDNHPLFIGI 373


>U50301-7|AAB37055.1|  366|Caenorhabditis elegans Serpin protein 7,
           isoform a protein.
          Length = 366

 Score = 29.9 bits (64), Expect = 0.57
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +3

Query: 153 QPLVFKANHPFVFFLKGDGVTLFNGVFH 236
           +P  F A+HPF F L  D   LF G+ H
Sbjct: 339 EPKDFTADHPFFFVLSKDNHPLFVGLHH 366


>U50301-6|AAT81198.1|  366|Caenorhabditis elegans Serpin protein 7,
           isoform b protein.
          Length = 366

 Score = 29.9 bits (64), Expect = 0.57
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = +3

Query: 153 QPLVFKANHPFVFFLKGDGVTLFNGV 230
           +P+VF+A+HPF+F L      +F G+
Sbjct: 339 KPIVFQADHPFLFMLTQTNHPIFLGI 364


>AY525084-1|AAS13532.1|  366|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 366

 Score = 29.9 bits (64), Expect = 0.57
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = +3

Query: 153 QPLVFKANHPFVFFLKGDGVTLFNGV 230
           +P+VF+A+HPF+F L      +F G+
Sbjct: 339 KPIVFQADHPFLFMLTQTNHPIFLGI 364


>AY525083-1|AAS13531.1|  366|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 366

 Score = 29.9 bits (64), Expect = 0.57
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +3

Query: 153 QPLVFKANHPFVFFLKGDGVTLFNGVFH 236
           +P  F A+HPF F L  D   LF G+ H
Sbjct: 339 EPKDFTADHPFFFVLSKDNHPLFVGLHH 366


>Z81571-4|CAB04614.1|  268|Caenorhabditis elegans Hypothetical
           protein M01G12.5 protein.
          Length = 268

 Score = 29.1 bits (62), Expect = 1.00
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = +3

Query: 156 PLVFKANHPFVFFLKGDGVTLFNGVF 233
           P +F+ N PF+F +  +GV +  G+F
Sbjct: 240 PYIFRVNRPFIFCVVQNGVPVTMGIF 265


>Z81571-2|CAB04611.1|  202|Caenorhabditis elegans Hypothetical
           protein M01G12.2 protein.
          Length = 202

 Score = 29.1 bits (62), Expect = 1.00
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = +3

Query: 156 PLVFKANHPFVFFLKGDGVTLFNGVF 233
           P +F+ N PF+F +  +GV +  G+F
Sbjct: 174 PYIFRVNRPFIFCVVQNGVPVTMGIF 199


>U41026-4|AAA82351.2|  265|Caenorhabditis elegans Hypothetical
           protein C28G1.2 protein.
          Length = 265

 Score = 29.1 bits (62), Expect = 1.00
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = +3

Query: 156 PLVFKANHPFVFFLKGDGVTLFNGVF 233
           P  F+A+HPFVF +  +G  ++ GVF
Sbjct: 239 PYHFRADHPFVFAVLRNGHPVYFGVF 264


>Z81528-6|CAB04285.1|  633|Caenorhabditis elegans Hypothetical
           protein F35E2.7 protein.
          Length = 633

 Score = 27.9 bits (59), Expect = 2.3
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = -3

Query: 164 YKRLTYSCTHKYYGEGVSCSSFSAFLVDFNERFLNSLT 51
           YK+ TY    K Y E V+  +    LVD+   F N+ T
Sbjct: 557 YKQATYEMARKRYAELVTECNGRCALVDYKLEFYNNAT 594


>Z81595-2|CAB04749.1|  527|Caenorhabditis elegans Hypothetical
           protein T22H2.2 protein.
          Length = 527

 Score = 27.5 bits (58), Expect = 3.0
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = -3

Query: 164 YKRLTYSCTHKYYGEGVSCSSFSAFLVDFNERFLNSLT 51
           YK+ TY    K Y E V   +    LVD+   F N+ T
Sbjct: 451 YKQATYEMARKRYAELVKECNGRCALVDYKLEFYNNAT 488


>AY525079-1|AAS13528.1|  359|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 359

 Score = 27.5 bits (58), Expect = 3.0
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +3

Query: 153 QPLVFKANHPFVFFLKGDGVTLFNGV 230
           +P  F A+HPF+F +  +  TLF GV
Sbjct: 332 EPTQFVADHPFLFAVLFENHTLFLGV 357


>AF026209-15|AAB71270.1|  359|Caenorhabditis elegans Serpin protein
           2 protein.
          Length = 359

 Score = 27.5 bits (58), Expect = 3.0
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +3

Query: 153 QPLVFKANHPFVFFLKGDGVTLFNGV 230
           +P  F A+HPF+F +  +  TLF GV
Sbjct: 332 EPTQFVADHPFLFAVLFENHTLFLGV 357


>U62639-1|AAD09364.1|  925|Caenorhabditis elegans lr protein.
          Length = 925

 Score = 27.1 bits (57), Expect = 4.0
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +3

Query: 210 VTLFNGVFHPLDINYFN 260
           V + NGV HP D+ YFN
Sbjct: 596 VVISNGVHHPYDMAYFN 612


>U62281-1|AAD09363.1|  925|Caenorhabditis elegans lipoprotein
           receptor precursor protein.
          Length = 925

 Score = 27.1 bits (57), Expect = 4.0
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +3

Query: 210 VTLFNGVFHPLDINYFN 260
           V + NGV HP D+ YFN
Sbjct: 596 VVISNGVHHPYDMAYFN 612


>AF185706-1|AAD56241.1|  925|Caenorhabditis elegans yolk receptor
           RME-2 protein.
          Length = 925

 Score = 27.1 bits (57), Expect = 4.0
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +3

Query: 210 VTLFNGVFHPLDINYFN 260
           V + NGV HP D+ YFN
Sbjct: 596 VVISNGVHHPYDMAYFN 612


>AF036703-1|AAB88554.3|  925|Caenorhabditis elegans Receptor
           mediated endocytosis protein2 protein.
          Length = 925

 Score = 27.1 bits (57), Expect = 4.0
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +3

Query: 210 VTLFNGVFHPLDINYFN 260
           V + NGV HP D+ YFN
Sbjct: 596 VVISNGVHHPYDMAYFN 612


>AY525078-1|AAS13527.1|  366|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 366

 Score = 26.2 bits (55), Expect = 7.0
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +3

Query: 153 QPLVFKANHPFVFFLKGDGVTLFNGVF 233
           +PL  + +HPF+F +  D   LF G +
Sbjct: 339 EPLHIRVDHPFLFAIIKDNSPLFLGTY 365


>AF026209-12|AAB71272.1|  366|Caenorhabditis elegans Serpin protein
           1 protein.
          Length = 366

 Score = 26.2 bits (55), Expect = 7.0
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +3

Query: 153 QPLVFKANHPFVFFLKGDGVTLFNGVF 233
           +PL  + +HPF+F +  D   LF G +
Sbjct: 339 EPLHIRVDHPFLFAIIKDNSPLFLGTY 365


>Z81492-4|CAB04031.1|  624|Caenorhabditis elegans Hypothetical
           protein E03H4.7 protein.
          Length = 624

 Score = 25.8 bits (54), Expect = 9.3
 Identities = 13/34 (38%), Positives = 15/34 (44%)
 Frame = -3

Query: 152 TYSCTHKYYGEGVSCSSFSAFLVDFNERFLNSLT 51
           TY    K Y E V        L+DFN  F N+ T
Sbjct: 551 TYQLARKRYAELVKDFKGRCTLIDFNPEFYNNST 584


>AY525080-1|AAS13529.1|  362|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 362

 Score = 25.8 bits (54), Expect = 9.3
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +3

Query: 153 QPLVFKANHPFVFFLKGDGVTLFNGVFH 236
           QP+ F A+HPF F +      +F GVF+
Sbjct: 334 QPVNFIADHPFFFTITFLNHPIFVGVFN 361


>AC087794-5|AAM48555.1|  362|Caenorhabditis elegans Serpin protein 3
           protein.
          Length = 362

 Score = 25.8 bits (54), Expect = 9.3
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +3

Query: 153 QPLVFKANHPFVFFLKGDGVTLFNGVFH 236
           QP+ F A+HPF F +      +F GVF+
Sbjct: 334 QPVNFIADHPFFFTITFLNHPIFVGVFN 361


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,863,854
Number of Sequences: 27780
Number of extensions: 86215
Number of successful extensions: 318
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 316
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 318
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 503476126
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)