Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0442
         (643 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox prote...    24   4.7  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    24   4.7  
AF020851-1|AAC31864.1|  214|Anopheles gambiae unknown protein.         24   4.7  
AF020850-1|AAC31863.1|  214|Anopheles gambiae unknown protein.         24   4.7  
AF020849-1|AAC31862.1|  214|Anopheles gambiae unknown protein.         24   4.7  

>AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox protein
           protein.
          Length = 338

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = +2

Query: 533 YAPYVATEPRANITE-YTVVKAAKGSS 610
           YAPY+A  P  ++T    V  AA G+S
Sbjct: 138 YAPYLAVRPVESLTSGSNVAAAAAGAS 164


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = -1

Query: 523  SRSRDG*GDNS*REGAASSRLGNRRAS 443
            SRSR G G  S     + SR G+R  S
Sbjct: 1067 SRSRSGSGSRSRSRSGSGSRAGSRAGS 1093


>AF020851-1|AAC31864.1|  214|Anopheles gambiae unknown protein.
          Length = 214

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 12/30 (40%), Positives = 13/30 (43%)
 Frame = -3

Query: 623 LTVLLKNPLQPSQLYTP*CLPEALSPHMEH 534
           L V LKN      LYT    P A + H  H
Sbjct: 1   LAVALKNTYSEPSLYTTVSEPSASTKHRHH 30


>AF020850-1|AAC31863.1|  214|Anopheles gambiae unknown protein.
          Length = 214

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 12/30 (40%), Positives = 13/30 (43%)
 Frame = -3

Query: 623 LTVLLKNPLQPSQLYTP*CLPEALSPHMEH 534
           L V LKN      LYT    P A + H  H
Sbjct: 1   LAVALKNTYSEPSLYTTVSEPSASTKHRHH 30


>AF020849-1|AAC31862.1|  214|Anopheles gambiae unknown protein.
          Length = 214

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 12/30 (40%), Positives = 13/30 (43%)
 Frame = -3

Query: 623 LTVLLKNPLQPSQLYTP*CLPEALSPHMEH 534
           L V LKN      LYT    P A + H  H
Sbjct: 1   LAVALKNTYSEPSLYTTVSEPSASTKHRHH 30


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 585,071
Number of Sequences: 2352
Number of extensions: 10395
Number of successful extensions: 57
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 57
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63141405
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)