Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0441
         (724 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA methy...    25   1.8  
CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein...    25   3.1  
CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein ...    25   3.1  
AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram nega...    24   4.1  
AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram nega...    24   4.1  
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    23   7.2  

>AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA
           methylase protein.
          Length = 459

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +3

Query: 423 AIHFKKLKSVKLGIDDYQKFLDDLAKNKKVE 515
           A HF+  KS K+ ++ Y K      K  K+E
Sbjct: 101 ATHFEANKSFKITVETYNKHFSQREKVAKIE 131


>CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein
           protein.
          Length = 415

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = +1

Query: 4   SGSPGCRRQQAVLVQQRKVRRLNACPLPTRLH 99
           +G P  +R  +  +Q+ KV++L+    PT  H
Sbjct: 259 NGEPASQRPSSSQMQRPKVQQLDTAAAPTNHH 290


>CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein
           protein.
          Length = 615

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -3

Query: 80  GQAFKRRTFRCCTNTACCRLQPGDP 6
           G   K  +FR C  +A C L P +P
Sbjct: 487 GVPTKNASFRNCVTSAACVLGPANP 511


>AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 15/44 (34%), Positives = 20/44 (45%)
 Frame = -1

Query: 703 TKSFLPAIPFPFPVSSKRCLCEPVYLLVSVNRSTAAAAAGDFVT 572
           TK+ LP   F    S+   +  P  + VS+N    A   GDF T
Sbjct: 256 TKNALPEQEFSKSFSTFGFVWTPDNITVSINGEDLATIGGDFWT 299


>AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 15/44 (34%), Positives = 20/44 (45%)
 Frame = -1

Query: 703 TKSFLPAIPFPFPVSSKRCLCEPVYLLVSVNRSTAAAAAGDFVT 572
           TK+ LP   F    S+   +  P  + VS+N    A   GDF T
Sbjct: 256 TKNALPEQEFSKSFSTFGFVWTPDNITVSINGEDLATIGGDFWT 299


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 14/49 (28%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
 Frame = +2

Query: 320 RSQVRWKSHHALAKRQMDEASQSH-*WKENNNNGHGHSLQKTQIGKTRH 463
           R  +  K HH  +KR  D   Q+H  + E   NG         I +  H
Sbjct: 839 RRMISEKKHHKRSKRVKDGKQQNHVSFPEFVQNGSAKQFANDYINEVLH 887


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 755,422
Number of Sequences: 2352
Number of extensions: 15083
Number of successful extensions: 31
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73597131
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)