Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0441
(724 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g16340.1 68416.m02066 ABC transporter family protein similar ... 34 0.083
At5g50260.1 68418.m06224 cysteine proteinase, putative similar t... 30 1.4
At1g45191.2 68414.m05184 glycosyl hydrolase family 1 protein Sin... 30 1.4
At4g22100.1 68417.m03195 glycosyl hydrolase family 1 protein con... 29 2.4
At4g10390.1 68417.m01705 protein kinase family protein contains ... 29 2.4
At2g22795.1 68415.m02704 expressed protein 29 3.1
At1g77410.1 68414.m09015 beta-galactosidase, putative / lactase,... 29 3.1
At1g65340.1 68414.m07409 cytochrome P450, putative similar to cy... 29 3.1
At5g36230.1 68418.m04371 eIF4-gamma/eIF5/eIF2-epsilon domain-con... 29 4.1
At4g16280.2 68417.m02470 flowering time control protein / FCA ga... 29 4.1
At4g16280.1 68417.m02469 flowering time control protein / FCA ga... 29 4.1
At3g11720.1 68416.m01437 expressed protein 29 4.1
At3g24650.1 68416.m03095 abscisic acid-insensitive protein 3 (AB... 28 5.5
At1g65220.1 68414.m07394 eIF4-gamma/eIF5/eIF2-epsilon domain-con... 28 5.5
At4g37460.1 68417.m05302 tetratricopeptide repeat (TPR)-containi... 28 7.2
At3g28720.1 68416.m03586 expressed protein 28 7.2
At5g59460.1 68418.m07452 scarecrow-like transcription factor 11 ... 27 9.5
At5g58410.1 68418.m07314 expressed protein contains similarity t... 27 9.5
At4g19490.2 68417.m02867 expressed protein 27 9.5
At4g19490.1 68417.m02866 expressed protein 27 9.5
At3g58260.1 68416.m06495 meprin and TRAF homology domain-contain... 27 9.5
At3g55220.1 68416.m06133 splicing factor, putative contains CPSF... 27 9.5
At3g55200.1 68416.m06131 splicing factor, putative contains CPSF... 27 9.5
At2g02170.1 68415.m00153 remorin family protein contains Pfam do... 27 9.5
At1g62220.1 68414.m07018 expressed protein 27 9.5
At1g60090.1 68414.m06770 glycosyl hydrolase family 1 protein con... 27 9.5
At1g47610.1 68414.m05288 transducin family protein / WD-40 repea... 27 9.5
>At3g16340.1 68416.m02066 ABC transporter family protein similar to
PDR5-like ABC transporter GI:1514643 from [Spirodela
polyrhiza]; contains Pfam profile: PF00005 ABC
transporter
Length = 1416
Score = 34.3 bits (75), Expect = 0.083
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +3
Query: 366 KWMKQAKVIDGKKITTTDTAIHFKKLKSVKLGIDDYQKFLDDLAKNKKVELDEIKKK 536
KW K+ ++ TT H + KLG+DD QKF+D + K + + ++ KK
Sbjct: 41 KWAALEKLPTFARLRTTIIHPHEDLVDVTKLGVDDRQKFIDSIFKVTEEDNEKFLKK 97
>At5g50260.1 68418.m06224 cysteine proteinase, putative similar to
cysteine endopeptidase precursor CysEP GI:2944446 from
[Ricinus communis]
Length = 361
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +2
Query: 314 IWRSQVRWKSHHALAKRQMDEASQSH*WKENNNNGH 421
+W RW+SHH +A+ ++A + + +K N + H
Sbjct: 34 LWELYERWRSHHTVARSLEEKAKRFNVFKHNVKHIH 69
>At1g45191.2 68414.m05184 glycosyl hydrolase family 1 protein Since
this genomic sequence region is unfinished, the
annotated gene may be missing a stop codon or start
codon
Length = 487
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +3
Query: 393 DGKKITTTDTAIHFKKLKSVKLGIDDYQKFLDDL 494
DG+K + DT +H +K+ + + D Y K+ +D+
Sbjct: 56 DGRKPSVWDTFLHCRKMDNGDIACDGYHKYKEDV 89
>At4g22100.1 68417.m03195 glycosyl hydrolase family 1 protein
contains Pfam PF00232 : Glycosyl hydrolase family 1
domain; similar to hydroxyisourate hydrolase
(GI:19569603) [Glycine max]; furostanol glycoside
26-O-beta-glucosidase F26G,Costus speciosus,
PATCHX:S78099
Length = 507
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +3
Query: 393 DGKKITTTDTAIHFKKLKSVKLGIDDYQKFLDDLAKNKKVELDEIK 530
DG+K + DT +H + L + + D Y K+ +D+ + LD +
Sbjct: 49 DGRKPSVWDTFLHTRNLSNGDITSDGYHKYKEDVKLMVETGLDAFR 94
>At4g10390.1 68417.m01705 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 342
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +3
Query: 447 SVKLGIDDYQKFLDDLAKNKKVELDEIKKKLTTCGQPGITSHVTKSPAAAAAVDRL 614
SV + D ++FLD +++DE+K L+ I+S ++ P+AA D L
Sbjct: 272 SVDISEDKVRQFLDPRLLRDSLDIDEVKTMLSVAA-VCISSKLSLRPSAAQVADTL 326
>At2g22795.1 68415.m02704 expressed protein
Length = 734
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +3
Query: 153 TEAQNTDAAVEQVTQEVKDVKLENGNAPGASNGTSSKS 266
T+ Q+ ++ + QEVKDV+ + P + NG S++S
Sbjct: 693 TQEQSDSSSDTNLPQEVKDVRTDLETLPDSGNGGSNES 730
>At1g77410.1 68414.m09015 beta-galactosidase, putative / lactase,
putative similar to beta-galactosidase SP:P45582 from
[Asparagus officinalis]
Length = 815
Score = 29.1 bits (62), Expect = 3.1
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 112 HHTNTLNTYKEKCLLKHRIRMPLWSK 189
H N+L ++ CL K R +P+WSK
Sbjct: 769 HSPNSLAVVQKACLKKSRCSVPVWSK 794
>At1g65340.1 68414.m07409 cytochrome P450, putative similar to
cytochrome P450 GI:4688670 from [Catharanthus roseus]
Length = 503
Score = 29.1 bits (62), Expect = 3.1
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 5/43 (11%)
Frame = +3
Query: 519 DEIKKKLTTCGQPGITSHVTKSPAAAAAVDRLT-----DTSKY 632
D++ +K+ T + I SH T P+ A+D LT DT+KY
Sbjct: 250 DQLLEKIITAKREEINSHGTHHPSRGEAIDVLTYYMTMDTTKY 292
>At5g36230.1 68418.m04371 eIF4-gamma/eIF5/eIF2-epsilon
domain-containing protein low similarity to SP|Q13144
Translation initiation factor eIF-2B epsilon subunit
(eIF-2B GDP-GTP exchange factor) {Homo sapiens};
contains Pfam profile PF02020:
eIF4-gamma/eIF5/eIF2-epsilon
Length = 411
Score = 28.7 bits (61), Expect = 4.1
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 153 TEAQNTDAAVEQVTQEVKDVKL 218
TE N D +E V Q++KD KL
Sbjct: 265 TEESNVDEVIESVKQQIKDAKL 286
>At4g16280.2 68417.m02470 flowering time control protein / FCA gamma
(FCA) identical to SP|O04425 Flowering time control
protein FCA {Arabidopsis thaliana}; four alternative
splice variants, one splicing isoform contains a
non-consensus CA donor splice site, based on cDNA:
gi:2204090
Length = 747
Score = 28.7 bits (61), Expect = 4.1
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = +3
Query: 162 QNTDAAVEQVTQEVKDVKLENGNAPGASNGTSSKSE 269
Q++ A+ Q+ Q+V+ ++ N N P + NG + K +
Sbjct: 523 QSSQQAISQLQQQVQSMQQPNQNLPLSQNGRAGKQQ 558
>At4g16280.1 68417.m02469 flowering time control protein / FCA gamma
(FCA) identical to SP|O04425 Flowering time control
protein FCA {Arabidopsis thaliana}; four alternative
splice variants, one splicing isoform contains a
non-consensus CA donor splice site, based on cDNA:
gi:2204090
Length = 505
Score = 28.7 bits (61), Expect = 4.1
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = +3
Query: 162 QNTDAAVEQVTQEVKDVKLENGNAPGASNGTSSKSE 269
Q++ A+ Q+ Q+V+ ++ N N P + NG + K +
Sbjct: 281 QSSQQAISQLQQQVQSMQQPNQNLPLSQNGRAGKQQ 316
>At3g11720.1 68416.m01437 expressed protein
Length = 542
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 2/33 (6%)
Frame = +3
Query: 180 VEQVTQE--VKDVKLENGNAPGASNGTSSKSED 272
V ++ +E V D+K EN ++P +S+ +SS SED
Sbjct: 348 VPEIEEEECVDDLKEENKSSPSSSSSSSSSSED 380
>At3g24650.1 68416.m03095 abscisic acid-insensitive protein 3 (ABI3)
identical to abscisic acid-insensitive protein 3
GI:16146 SP:Q01593 from [Arabidopsis thaliana], (Plant
Cell 4 (10), 1251-1261 (1992))
Length = 720
Score = 28.3 bits (60), Expect = 5.5
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +2
Query: 362 RQMDEASQSH*WKENNNNGHGHSLQKTQIGKTRHRRLPEVS 484
RQ S H NNNN + + +TQIG+T P+++
Sbjct: 465 RQRRFLSHHHRHNNNNNNNNNNQQNQTQIGETCAAVAPQLN 505
>At1g65220.1 68414.m07394 eIF4-gamma/eIF5/eIF2-epsilon
domain-containing protein low similarity to SP|P47823
Translation initiation factor eIF-2B epsilon subunit
(eIF-2B GDP-GTP exchange factor) {Oryctolagus
cuniculus}; contains Pfam profile PF02020:
eIF4-gamma/eIF5/eIF2-epsilon
Length = 411
Score = 28.3 bits (60), Expect = 5.5
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = +3
Query: 120 KYIKHL*RKMSTEAQNTDAAVEQVTQEVKDVKL 218
K IK + TE N D E V Q+VKD KL
Sbjct: 254 KEIKAVLTSQVTEEINVDEVTEMVKQQVKDAKL 286
>At4g37460.1 68417.m05302 tetratricopeptide repeat (TPR)-containing
protein contains Pfam profile PF00515: TPR Domain
Length = 883
Score = 27.9 bits (59), Expect = 7.2
Identities = 20/78 (25%), Positives = 37/78 (47%)
Frame = +3
Query: 33 GSISAATKSASLKRLSATDSLA*YMISSHKYIKHL*RKMSTEAQNTDAAVEQVTQEVKDV 212
G SA ++A +K+L + L + + + I + + +TE+ A + K
Sbjct: 99 GYKSALQQTADVKQLLELEEL---LKDARREIDGILKSHATESPQETPAYHSEKSDEKSD 155
Query: 213 KLENGNAPGASNGTSSKS 266
KL+N + +SNG S +S
Sbjct: 156 KLDNHESGASSNGNSHES 173
>At3g28720.1 68416.m03586 expressed protein
Length = 687
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -2
Query: 486 LETSGSRRCRVLPI*VF*SEWPCPLLLFSFHQ 391
+E G+ RVLP+ VF + PLLL +HQ
Sbjct: 424 VEEEGNEFARVLPVYVFDLDINTPLLLDRYHQ 455
>At5g59460.1 68418.m07452 scarecrow-like transcription factor 11
(SCL11) identical to cDNA scarecrow-like 11 (SCL11)
mRNA, partial cds gi:4580526
Length = 172
Score = 27.5 bits (58), Expect = 9.5
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +1
Query: 259 VKARITPYLSRKPSRRFPNLEIPSPMEKPSRSRKATNG*SKPKS 390
+K + + +S + +R PN + P +KPS S K NG KPKS
Sbjct: 116 LKRKQSEVVSEEQNR--PN-KSPRSFDKPSPSNKKGNGFKKPKS 156
>At5g58410.1 68418.m07314 expressed protein contains similarity to
hypothetical proteins
Length = 1873
Score = 27.5 bits (58), Expect = 9.5
Identities = 16/62 (25%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Frame = +3
Query: 351 LSQSDKWMKQAKVIDGKKITTTDTAIHFKKLKSVKLGIDDYQ-KFLDDLAKNKKVELDEI 527
LS++ W++ ++++DG K+ + ++ F K V + IDD + L + K K + +++
Sbjct: 588 LSKAFPWIRSSELLDGVKLLSVSVSV-FGPRKVVPVLIDDIETSTLLSVEKEKNMSPEKL 646
Query: 528 KK 533
K
Sbjct: 647 IK 648
>At4g19490.2 68417.m02867 expressed protein
Length = 1054
Score = 27.5 bits (58), Expect = 9.5
Identities = 14/51 (27%), Positives = 26/51 (50%)
Frame = +3
Query: 483 LDDLAKNKKVELDEIKKKLTTCGQPGITSHVTKSPAAAAAVDRLTDTSKYT 635
+D +A++ ++ DEI KL + + +H+ P +R DT+K T
Sbjct: 897 IDKVAQDFRIHRDEIYTKLVQIMRERLLAHLHGLPKVVEGWNRPPDTNKQT 947
>At4g19490.1 68417.m02866 expressed protein
Length = 1054
Score = 27.5 bits (58), Expect = 9.5
Identities = 14/51 (27%), Positives = 26/51 (50%)
Frame = +3
Query: 483 LDDLAKNKKVELDEIKKKLTTCGQPGITSHVTKSPAAAAAVDRLTDTSKYT 635
+D +A++ ++ DEI KL + + +H+ P +R DT+K T
Sbjct: 897 IDKVAQDFRIHRDEIYTKLVQIMRERLLAHLHGLPKVVEGWNRPPDTNKQT 947
>At3g58260.1 68416.m06495 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein similar to
ubiquitin-specific protease 12 [Arabidopsis thaliana]
GI:11993471; contains Pfam profile PF00917: MATH domain
Length = 321
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +3
Query: 441 LKSVKLGIDDYQKFLDDLAKNKKVELDEIK 530
+KSV +D +K LD+L + KK E D+I+
Sbjct: 226 MKSVGFKLDWLEKKLDELFEKKKEEADKIR 255
>At3g55220.1 68416.m06133 splicing factor, putative contains CPSF A
subunit region (PF03178); contains weak WD-40 repeat
(PF00400); similar to Splicing factor 3B subunit 3
(SF3b130)/spliceosomal protein/Splicing factor 3B subunit
3 (SAP 130)(KIAA0017)(SP:Q15393) Homo sapiens,
EMBL:HSAJ1443_1
Length = 1214
Score = 27.5 bits (58), Expect = 9.5
Identities = 25/101 (24%), Positives = 42/101 (41%), Gaps = 2/101 (1%)
Frame = +3
Query: 120 KYIKHL*RKMSTEAQNTDAAVEQVTQEVKDVK-LENGNAPGASNGTSSKSEDNALXXXXX 296
K++ H RK+ ++ A +E + E G NG + + E+ A
Sbjct: 782 KFVLHPKRKLLVIIESDQGAFTAEEREAARKECFEAGGVGENGNGNADQMENGA------ 835
Query: 297 XXXXXXXGDPKSDGK-AITLSQSDKWMKQAKVIDGKKITTT 416
DP SD + ++S+KW+ +V+D K TTT
Sbjct: 836 --DDEDKEDPLSDEQYGYPKAESEKWVSCIRVLDPKTATTT 874
>At3g55200.1 68416.m06131 splicing factor, putative contains CPSF A
subunit region (PF03178); contains weak WD-40 repeat
(PF00400); similar to Splicing factor 3B subunit 3
(SF3b130)/spliceosomal protein/Splicing factor 3B subunit
3 (SAP 130)(KIAA0017)(SP:Q15393) Homo sapiens,
EMBL:HSAJ1443_1
Length = 1214
Score = 27.5 bits (58), Expect = 9.5
Identities = 25/101 (24%), Positives = 42/101 (41%), Gaps = 2/101 (1%)
Frame = +3
Query: 120 KYIKHL*RKMSTEAQNTDAAVEQVTQEVKDVK-LENGNAPGASNGTSSKSEDNALXXXXX 296
K++ H RK+ ++ A +E + E G NG + + E+ A
Sbjct: 782 KFVLHPKRKLLVIIESDQGAFTAEEREAARKECFEAGGVGENGNGNADQMENGA------ 835
Query: 297 XXXXXXXGDPKSDGK-AITLSQSDKWMKQAKVIDGKKITTT 416
DP SD + ++S+KW+ +V+D K TTT
Sbjct: 836 --DDEDKEDPLSDEQYGYPKAESEKWVSCIRVLDPKTATTT 874
>At2g02170.1 68415.m00153 remorin family protein contains Pfam
domain, PF03763: Remorin, C-terminal region
Length = 486
Score = 27.5 bits (58), Expect = 9.5
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 6/63 (9%)
Frame = +1
Query: 253 RPVKARITPYLSRKPSRRFPNLEIPSPMEKP------SRSRKATNG*SKPKSLMERK*QQ 414
R + +TP S++PSR + +P+ P S R+A+ K L E++ Q
Sbjct: 266 RDMGTEMTPIASQEPSRNGTPIRATTPIRSPISSEPSSPGRQASASPMSNKELSEKELQM 325
Query: 415 RTR 423
+TR
Sbjct: 326 KTR 328
>At1g62220.1 68414.m07018 expressed protein
Length = 153
Score = 27.5 bits (58), Expect = 9.5
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +3
Query: 573 VTKSPAAAAAVDRLTDTSKYTGSHRQRFDETGKGKGIAGRKD 698
VT+ AAA A ++ S+ GS ++ GKGK G+KD
Sbjct: 115 VTRKAAAARANGKVASASRVKGSSEKK---KGKGKKGKGKKD 153
>At1g60090.1 68414.m06770 glycosyl hydrolase family 1 protein
contains Pfam PF00232 : Glycosyl hydrolase family 1
domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase;
similar to hydroxyisourate hydrolase (GI:19569603)
[Glycine max]
Length = 512
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = +3
Query: 393 DGKKITTTDTAIHFKKLKSVKLGIDDYQKFLDDLAKNKKVELDEIK 530
DG+K + DT H + + + D Y K+ DD+ LD +
Sbjct: 51 DGRKPSLWDTLCHSRDQGNGDIACDGYHKYKDDVKLMVDTNLDAFR 96
>At1g47610.1 68414.m05288 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein (GI:2739374)
[Arabidopsis thaliana]
Length = 351
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/36 (30%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 278 LIFQGSLQGVFQIWRSQVRWK-SHHALAKRQMDEAS 382
L+F GS G ++W+ ++R K + H+L + + + S
Sbjct: 189 LVFTGSADGTVKVWKREIRGKRTAHSLFQTLLKQES 224
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,672,326
Number of Sequences: 28952
Number of extensions: 325256
Number of successful extensions: 1043
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1008
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1041
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1575119672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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