Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0440
(718 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_33442| Best HMM Match : AAA (HMM E-Value=0) 277 7e-75
SB_33584| Best HMM Match : No HMM Matches (HMM E-Value=.) 122 4e-28
SB_35973| Best HMM Match : zf-CCHC (HMM E-Value=0.0026) 85 4e-17
SB_5903| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 3e-10
SB_9909| Best HMM Match : AAA (HMM E-Value=0) 55 5e-08
SB_3919| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 7e-04
SB_40956| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.025
SB_28977| Best HMM Match : AAA (HMM E-Value=0) 35 0.057
SB_14682| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.10
SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30) 31 0.93
SB_50520| Best HMM Match : zf-DNL (HMM E-Value=3.4) 31 0.93
SB_32179| Best HMM Match : DUF1409 (HMM E-Value=0.071) 31 0.93
SB_59534| Best HMM Match : AA_permease (HMM E-Value=3.1e-05) 31 1.2
SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0) 31 1.2
SB_45627| Best HMM Match : AAA (HMM E-Value=0) 30 1.6
SB_43457| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_55825| Best HMM Match : Arch_fla_DE (HMM E-Value=2.9) 29 2.8
SB_8000| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_31987| Best HMM Match : Troponin (HMM E-Value=7.1) 29 3.8
SB_7001| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_33753| Best HMM Match : bZIP_Maf (HMM E-Value=2.3) 29 5.0
SB_17390| Best HMM Match : Exo_endo_phos (HMM E-Value=3.1e-13) 29 5.0
SB_11522| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_30701| Best HMM Match : Lipase_GDSL (HMM E-Value=0.022) 29 5.0
SB_30175| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_29903| Best HMM Match : SAP (HMM E-Value=2.2e-11) 29 5.0
SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_14841| Best HMM Match : RVT_1 (HMM E-Value=0) 29 5.0
SB_26930| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_1251| Best HMM Match : Gemini_C4 (HMM E-Value=6.4) 28 6.6
SB_35866| Best HMM Match : TPR_MLP1_2 (HMM E-Value=0.34) 28 6.6
SB_39137| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7
SB_37200| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7
SB_19460| Best HMM Match : AAA (HMM E-Value=0) 28 8.7
SB_3407| Best HMM Match : TPX2 (HMM E-Value=2.9e-09) 28 8.7
SB_29470| Best HMM Match : Glyco_transf_10 (HMM E-Value=9.1e-39) 28 8.7
>SB_33442| Best HMM Match : AAA (HMM E-Value=0)
Length = 369
Score = 277 bits (679), Expect = 7e-75
Identities = 140/185 (75%), Positives = 156/185 (84%), Gaps = 2/185 (1%)
Frame = +1
Query: 169 MEEIGIILPEKDDQVTDSKGLA--FAGPQSFDELESEDLYTKYKKLQRMLEFLEVQEEYI 342
MEEIGII P++D + A + S + E +DLY YKKL++ LEFLEVQEEYI
Sbjct: 1 MEEIGIIQPQEDKSTSSRPTTAGTISSLCSPVDPEMDDLYITYKKLEKQLEFLEVQEEYI 60
Query: 343 KDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFLEAVDQNTGIVGSTTGSNYYVRILSTIDR 522
KDEQ+NLKKE LHAQEEVKRIQSVPLVIGQFLEAVDQNTGIV STTGSNYYVRILSTID+
Sbjct: 61 KDEQKNLKKELLHAQEEVKRIQSVPLVIGQFLEAVDQNTGIVASTTGSNYYVRILSTIDK 120
Query: 523 ELLKPSASVALHKHSNALVDVLPPEADSSISMLQADEKPDVQYSDXGGMDTQKQEIREAV 702
ELLKPSASVALHKHSNALVD+LPPEADSSI+ML +EKP+V Y++ GGMD QKQEIREAV
Sbjct: 121 ELLKPSASVALHKHSNALVDILPPEADSSIAMLTNEEKPNVSYAEIGGMDIQKQEIREAV 180
Query: 703 ELPLT 717
ELPLT
Sbjct: 181 ELPLT 185
>SB_33584| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 455
Score = 122 bits (293), Expect = 4e-28
Identities = 58/146 (39%), Positives = 98/146 (67%), Gaps = 2/146 (1%)
Frame = +1
Query: 286 KYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQE--EVKRIQSVPLVIGQFLEAVDQNT 459
K KL R+ +FL ++EE+I++++R +E H +E +V ++ P+ +G E +D N
Sbjct: 256 KLLKLDRIKDFLLMEEEFIQNQERLKPQEEKHEEERSKVDDLRGTPMSVGNLEEIIDDNH 315
Query: 460 GIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQADEKP 639
IV ++ GS +YV ILS +D++LL+P +V L+ +A+V VL +AD +++++ ++ P
Sbjct: 316 AIVSTSVGSEHYVSILSFVDKDLLEPGCTVLLNHKVHAVVGVLSDDADPMVTVMKLEKAP 375
Query: 640 DVQYSDXGGMDTQKQEIREAVELPLT 717
Y+D GG+DTQ QEI+E+VELPLT
Sbjct: 376 QESYADIGGLDTQIQEIKESVELPLT 401
>SB_35973| Best HMM Match : zf-CCHC (HMM E-Value=0.0026)
Length = 779
Score = 85.4 bits (202), Expect = 4e-17
Identities = 44/149 (29%), Positives = 81/149 (54%)
Frame = +1
Query: 271 EDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFLEAVD 450
E +YKK L+ + + ++++ ++ KEY ++ ++K +QSV ++G+ L+ +
Sbjct: 8 EKALLEYKKKLLEHRELDARLKEMREQLKDFTKEYDKSENDLKALQSVGQIVGEVLKQLT 67
Query: 451 QNTGIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQAD 630
+ IV +T G Y V +D+ LK VAL + ++ LP E D + + +
Sbjct: 68 EEKFIVKATNGPRYVVGCRRQVDKAKLKQGTRVALDMTTLTIMRYLPREVDPLVYNMSHE 127
Query: 631 EKPDVQYSDXGGMDTQKQEIREAVELPLT 717
+ ++ YSD GG+ Q +E+RE +ELPLT
Sbjct: 128 DPGNISYSDVGGLSEQIRELREVIELPLT 156
>SB_5903| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 346
Score = 62.5 bits (145), Expect = 3e-10
Identities = 26/76 (34%), Positives = 47/76 (61%)
Frame = +1
Query: 463 IVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQADEKPD 642
++ ++T Y++ ++ ++ E L P V ++K S +++ LP E DS + ++ DE+P
Sbjct: 91 VIKTSTRQTYFLPVIGLVEPENLTPGDLVGVNKDSYLILEKLPAEYDSRVKAMEVDERPT 150
Query: 643 VQYSDXGGMDTQKQEI 690
QYSD GG+D Q QE+
Sbjct: 151 EQYSDIGGLDQQIQEM 166
>SB_9909| Best HMM Match : AAA (HMM E-Value=0)
Length = 400
Score = 55.2 bits (127), Expect = 5e-08
Identities = 23/43 (53%), Positives = 31/43 (72%)
Frame = +1
Query: 586 LPPEADSSISMLQADEKPDVQYSDXGGMDTQKQEIREAVELPL 714
LPP+ D +++M+Q +EKPDV YSD GG Q ++RE VE PL
Sbjct: 62 LPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIDKLREVVETPL 104
>SB_3919| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 442
Score = 41.5 bits (93), Expect = 7e-04
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Frame = +1
Query: 532 KPSASVALHKHSNALVDVLP----PEADSSISMLQADEKPDVQYSDXGGMDTQKQEIREA 699
K V +H +VD+ E D +S++ ++ PD Y GG+D Q +EI+E
Sbjct: 133 KKKVLVKVHPEGKFVVDIDKGIDMAEVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEV 192
Query: 700 VELPL 714
+ELP+
Sbjct: 193 IELPV 197
>SB_40956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1086
Score = 36.3 bits (80), Expect = 0.025
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +1
Query: 604 SSISMLQADEKPDVQYSDXGGMDTQKQEIREAVELPL 714
S + A + PD+ + D GG+D+ K+EI + ++LPL
Sbjct: 796 SHADAIGAPKIPDISWKDVGGLDSVKEEILDTIQLPL 832
>SB_28977| Best HMM Match : AAA (HMM E-Value=0)
Length = 442
Score = 35.1 bits (77), Expect = 0.057
Identities = 13/28 (46%), Positives = 23/28 (82%)
Frame = +1
Query: 631 EKPDVQYSDXGGMDTQKQEIREAVELPL 714
EKP+V++SD G+++ K+ ++EAV LP+
Sbjct: 90 EKPNVKWSDIAGLESAKEALKEAVILPI 117
>SB_14682| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 802
Score = 34.3 bits (75), Expect = 0.10
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 607 SISMLQADEKPDVQYSDXGGMDTQKQEIREAVELPLT 717
S+ ++ K V + GG+ TQ Q +RE +E+PLT
Sbjct: 241 SVIKKDSEAKKGVSFQSIGGLKTQIQAVREMIEMPLT 277
Score = 32.3 bits (70), Expect = 0.40
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +1
Query: 631 EKPDVQYSDXGGMDTQKQEIREAVELPL 714
E P V +SD GG + K++++EAVE PL
Sbjct: 530 EVPKVHWSDVGGNEMIKRKLKEAVEWPL 557
>SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30)
Length = 3071
Score = 31.1 bits (67), Expect = 0.93
Identities = 12/49 (24%), Positives = 30/49 (61%)
Frame = +1
Query: 265 ESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQS 411
E++ L + + R L +LE + E ++ E+ LKK++ ++++E +++
Sbjct: 1867 ENDRLQNEISAINRKLVYLETRNENLESEKDRLKKDFANSKKESAELRA 1915
>SB_50520| Best HMM Match : zf-DNL (HMM E-Value=3.4)
Length = 277
Score = 31.1 bits (67), Expect = 0.93
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Frame = +1
Query: 403 IQSVPLVIGQFLEAVDQNTGIVGSTTGSNYYVRILST-IDRELLKPS--ASVALHKHSN 570
+Q V+G + ++ Q T + +TTG + +RI S +D E + + ++LHKHSN
Sbjct: 61 LQITTAVLGVYSWSLLQFTLVTTATTGKDNKIRIASNKVDAEKVDKAIDRKISLHKHSN 119
>SB_32179| Best HMM Match : DUF1409 (HMM E-Value=0.071)
Length = 429
Score = 31.1 bits (67), Expect = 0.93
Identities = 15/45 (33%), Positives = 27/45 (60%)
Frame = +1
Query: 286 KYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPL 420
+Y+ Q ++F +V+EE K +Q N+K A+EE +R +S +
Sbjct: 148 EYENKQLRMDFEKVEEEVEKWKQNNMKLTATRAREEQQRAKSTAM 192
>SB_59534| Best HMM Match : AA_permease (HMM E-Value=3.1e-05)
Length = 889
Score = 30.7 bits (66), Expect = 1.2
Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 9/82 (10%)
Frame = +1
Query: 196 EKDDQVTDSKGLAFAGPQSFDELESEDLYTKYK--KLQRMLEFLEV-----QEEYIK--D 348
EK+ + KG A Q D + L + K + Q ML++LE E +K +
Sbjct: 262 EKERHIERLKGAAVLNIQIEDNKQQRLLEEEKKDQETQAMLQYLERLKDEDMEALVKKHE 321
Query: 349 EQRNLKKEYLHAQEEVKRIQSV 414
Q+NL KE A EE+KR V
Sbjct: 322 TQKNLMKEVAKANEEIKRQSEV 343
>SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0)
Length = 2858
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 268 SEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQS 411
+++L + ++ LE L+ Q IKDE NLK+ Q+E+ +++
Sbjct: 1347 TDNLQASKEYIEGQLESLKAQMSKIKDENENLKESDARRQQEILDLEN 1394
>SB_45627| Best HMM Match : AAA (HMM E-Value=0)
Length = 628
Score = 30.3 bits (65), Expect = 1.6
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +1
Query: 631 EKPDVQYSDXGGMDTQKQEIREAVELPL 714
E P+V + D GG++ K+E++E V+ P+
Sbjct: 303 EVPNVSWDDIGGLEGVKRELQELVQYPV 330
>SB_43457| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 464
Score = 29.9 bits (64), Expect = 2.2
Identities = 20/84 (23%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Frame = +1
Query: 154 LAIEIMEEIGIILPEKDDQVTDSKGLAFAGPQSFDELESEDLYTKYKKLQRMLEFLEVQE 333
L++ ++E+ L +++ ++ D AF QS+ E + K +K + + E +V++
Sbjct: 366 LSVNLLEQTNRQLHQRNQKLLDECASAF---QSYQEAFAAQRKQKLEKQEALAELEQVKQ 422
Query: 334 EY--IKDEQRNLKKEYLHAQEEVK 399
EY +K E +LK + ++ +K
Sbjct: 423 EYEAVKMEVSSLKSKNADSKTLIK 446
>SB_55825| Best HMM Match : Arch_fla_DE (HMM E-Value=2.9)
Length = 208
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/58 (24%), Positives = 32/58 (55%)
Frame = +1
Query: 298 LQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFLEAVDQNTGIVG 471
+Q + E ++ E+ + + + KE+ + V+ + V+GQ +++VD+ G+VG
Sbjct: 2 VQSIDEKVQDAEQKVTKGFQEVGKEFQVVGQHVQSVDEKVGVVGQHVQSVDEKVGVVG 59
>SB_8000| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 937
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/64 (26%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +1
Query: 292 KKLQRMLEFLEVQEEYIKDEQRNLKKEYLH--AQEEVKRIQSVPLVIGQFLEAVDQNTGI 465
KK+ +LE + + + I +E + +KK H + K++ + +E+V++N G+
Sbjct: 188 KKMAEILEEIGISPDRIHEESQQIKKPSFHDCTNKPAKKMTPRSVSSPSMMESVNEN-GL 246
Query: 466 VGST 477
GST
Sbjct: 247 PGST 250
>SB_31987| Best HMM Match : Troponin (HMM E-Value=7.1)
Length = 235
Score = 29.1 bits (62), Expect = 3.8
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +1
Query: 343 KDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFLEAVDQNTGIV 468
+DE+R+ KE + +V+R++S V FL QN GIV
Sbjct: 41 QDEERDSVKEKNRQRSDVERLRSTYHVSESFLAMDKQNEGIV 82
>SB_7001| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 139
Score = 29.1 bits (62), Expect = 3.8
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = -3
Query: 623 CNIEIELSASGGKTSTRALECLCRATEA--DGFNNSLSIV 510
CNI+IE GG TS+RA A + + NSL++V
Sbjct: 22 CNIQIEFLQPGGSTSSRASATAVELQFALYESYYNSLAVV 61
>SB_33753| Best HMM Match : bZIP_Maf (HMM E-Value=2.3)
Length = 223
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +1
Query: 256 DELESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEE 393
D LE +DLY ++ QR+ E + Y+++E R +K + +EE
Sbjct: 8 DVLELKDLYKSFQSAQRLKE----ENGYLREELRLIKSDMDQIREE 49
>SB_17390| Best HMM Match : Exo_endo_phos (HMM E-Value=3.1e-13)
Length = 851
Score = 28.7 bits (61), Expect = 5.0
Identities = 17/61 (27%), Positives = 33/61 (54%)
Frame = +1
Query: 256 DELESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQF 435
D LE +DLY ++ QR+ E + Y+++E R +K + +EE ++ V ++ +
Sbjct: 37 DVLELKDLYKSFQSAQRLKE----ENGYLREELRLIKSDMDKIREERDSLKLVVSMLSKD 92
Query: 436 L 438
L
Sbjct: 93 L 93
>SB_11522| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 277
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +1
Query: 637 PDVQYSDXGGMDTQKQEIREAVELPL 714
PDV++ D G+D K+ ++EAV P+
Sbjct: 52 PDVRWDDIIGLDAAKRLVKEAVVYPI 77
>SB_30701| Best HMM Match : Lipase_GDSL (HMM E-Value=0.022)
Length = 297
Score = 28.7 bits (61), Expect = 5.0
Identities = 17/61 (27%), Positives = 33/61 (54%)
Frame = +1
Query: 256 DELESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQF 435
D LE +DLY ++ QR+ E + Y+++E R +K + +EE ++ V ++ +
Sbjct: 8 DVLELKDLYKSFQSAQRLKE----ENGYLREELRLIKSDMDKIREERDSLKLVVSMLSKD 63
Query: 436 L 438
L
Sbjct: 64 L 64
>SB_30175| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 617
Score = 28.7 bits (61), Expect = 5.0
Identities = 19/71 (26%), Positives = 41/71 (57%)
Frame = +1
Query: 187 ILPEKDDQVTDSKGLAFAGPQSFDELESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLK 366
+L EK+D++ K + Q +EL+ +L K +++++ + L+ Q+E +K ++
Sbjct: 342 LLQEKEDEIKHRKLI-----QQQEELKQRELL-KQQEVKKQQKLLK-QQERLKQQEEIRH 394
Query: 367 KEYLHAQEEVK 399
++ L QEE+K
Sbjct: 395 RQLLKEQEELK 405
>SB_29903| Best HMM Match : SAP (HMM E-Value=2.2e-11)
Length = 510
Score = 28.7 bits (61), Expect = 5.0
Identities = 17/61 (27%), Positives = 33/61 (54%)
Frame = +1
Query: 256 DELESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQF 435
D LE +DLY ++ QR+ E + Y+++E R +K + +EE ++ V ++ +
Sbjct: 171 DVLELKDLYKSFQSAQRLKE----ENGYLREELRLIKSDMDKIREERDSLKLVVSMLSKD 226
Query: 436 L 438
L
Sbjct: 227 L 227
>SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3934
Score = 28.7 bits (61), Expect = 5.0
Identities = 18/77 (23%), Positives = 42/77 (54%)
Frame = +1
Query: 196 EKDDQVTDSKGLAFAGPQSFDELESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEY 375
+KDD++ + KG + E E +L ++L+ L+ +E + + ++E + +K+Y
Sbjct: 3394 QKDDELCEVKG-----DKVSLEKEQWELREAIEELRATLKGVEEERDRYENELDDSRKQY 3448
Query: 376 LHAQEEVKRIQSVPLVI 426
A++E+K ++ V+
Sbjct: 3449 PDAKDEIKHNMNISKVL 3465
>SB_14841| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 1821
Score = 28.7 bits (61), Expect = 5.0
Identities = 17/61 (27%), Positives = 33/61 (54%)
Frame = +1
Query: 256 DELESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQF 435
D LE +DLY ++ QR+ E + Y+++E R +K + +EE ++ V ++ +
Sbjct: 171 DVLELKDLYKSFQSAQRLKE----ENGYLREELRLIKSDMDKIREERDSLKLVVSMLSKD 226
Query: 436 L 438
L
Sbjct: 227 L 227
>SB_26930| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1533
Score = 28.3 bits (60), Expect = 6.6
Identities = 20/69 (28%), Positives = 29/69 (42%)
Frame = +1
Query: 322 EVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFLEAVDQNTGIVGSTTGSNYYVR 501
E+ E I D K+YL EE+ ++ LVIG + V +N T +
Sbjct: 684 EMLPEDITDGVSIQYKQYLKKDEELSSVEEPQLVIGGEEDRVSKNDNDANLATDAGVVHT 743
Query: 502 ILSTIDREL 528
+DREL
Sbjct: 744 PNDGVDREL 752
>SB_1251| Best HMM Match : Gemini_C4 (HMM E-Value=6.4)
Length = 204
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +1
Query: 430 QFLEAVDQNTGIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDV 585
Q + VDQ GI+GS G+ R +L S LH H L+++
Sbjct: 70 QLVHKVDQRWGILGSRMGATLTRRAWLWCAGRVLPNEWSAVLHYHEAVLLEI 121
>SB_35866| Best HMM Match : TPR_MLP1_2 (HMM E-Value=0.34)
Length = 758
Score = 28.3 bits (60), Expect = 6.6
Identities = 26/104 (25%), Positives = 48/104 (46%), Gaps = 6/104 (5%)
Frame = +1
Query: 286 KYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFLEAVDQNT-- 459
K K++ R + LE + + E+RN++K+YL Q E + + S L + + NT
Sbjct: 621 KRKEIWREIRELETILKDVHKEKRNIEKKYLAFQHENREL-SRSLNSSRSPTGLSPNTSP 679
Query: 460 ----GIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALV 579
G++ + G +L ++ L+K S + K N+ V
Sbjct: 680 NRGIGMLVVSPGKTRTASLLERVNNLLMKTSMPNGVKKELNSPV 723
>SB_39137| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 333
Score = 27.9 bits (59), Expect = 8.7
Identities = 11/35 (31%), Positives = 24/35 (68%)
Frame = +1
Query: 205 DQVTDSKGLAFAGPQSFDELESEDLYTKYKKLQRM 309
++ T+ + LAF ++ DE ++++ T+ +KLQR+
Sbjct: 174 NETTEERKLAFENLKAKDEKSAKEIETQMRKLQRI 208
>SB_37200| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 908
Score = 27.9 bits (59), Expect = 8.7
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +1
Query: 646 QYSDXGGMDTQKQEIREAVELPL 714
++ D GG++ KQ +R+A+E PL
Sbjct: 482 RWDDVGGLEGVKQALRQAIEWPL 504
>SB_19460| Best HMM Match : AAA (HMM E-Value=0)
Length = 340
Score = 27.9 bits (59), Expect = 8.7
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +1
Query: 646 QYSDXGGMDTQKQEIREAVELPL 714
++ D GG++ KQ +R+A+E PL
Sbjct: 11 RWDDVGGLEGVKQALRQAIEWPL 33
>SB_3407| Best HMM Match : TPX2 (HMM E-Value=2.9e-09)
Length = 787
Score = 27.9 bits (59), Expect = 8.7
Identities = 20/57 (35%), Positives = 30/57 (52%)
Frame = +1
Query: 244 PQSFDELESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSV 414
P SF++ E L K KK+Q E LE +++ K E NL+ E + + K + SV
Sbjct: 602 PFSFEQRNKEALAKKEKKIQ---EMLEEEKKATKFEPFNLETENRGSVKAEKWLNSV 655
>SB_29470| Best HMM Match : Glyco_transf_10 (HMM E-Value=9.1e-39)
Length = 426
Score = 27.9 bits (59), Expect = 8.7
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = -3
Query: 458 VF*STASRNCPMTRGTDCMRFTSSCACKYSFFKFRCS 348
VF SR + GT C RFT C +KFR S
Sbjct: 260 VFGGCRSRFPKHSEGTSCRRFTKECDNLMRRYKFRLS 296
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,779,585
Number of Sequences: 59808
Number of extensions: 349141
Number of successful extensions: 1178
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1072
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1172
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1901817086
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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