Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0439
(743 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_29285| Best HMM Match : DUF1201 (HMM E-Value=2.4) 33 0.24
SB_52745| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.56
SB_56430| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.99
SB_54757| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.99
SB_47635| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.99
SB_43613| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.99
SB_43412| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.99
SB_31108| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.99
SB_21994| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.99
SB_8174| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.99
SB_4560| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.99
SB_50524| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_54339| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_35386| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_52100| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_50444| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_2671| Best HMM Match : Amidohydro_2 (HMM E-Value=5.6) 30 2.3
SB_12111| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_8543| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_43390| Best HMM Match : fn3 (HMM E-Value=9.3e-30) 29 3.0
SB_26762| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_7839| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_50750| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_25872| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_9975| Best HMM Match : 7tm_2 (HMM E-Value=1.9e-38) 29 5.3
SB_99| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_24611| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_1239| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_50042| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_23012| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_14396| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_454| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_57778| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_40583| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_38078| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_7024| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_59124| Best HMM Match : Bac_luciferase (HMM E-Value=1.6) 28 9.2
SB_55801| Best HMM Match : EPTP (HMM E-Value=0.24) 28 9.2
SB_55208| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_50748| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_48029| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_38869| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_37889| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_24786| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_22515| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_21334| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_19004| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_17133| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_13835| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_8834| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_7598| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_3084| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
>SB_29285| Best HMM Match : DUF1201 (HMM E-Value=2.4)
Length = 332
Score = 33.1 bits (72), Expect = 0.24
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -3
Query: 102 MCNVTCTLFFCRNCLSIRLXETSCSPGDPLV 10
+ N+ T +F RN S + SCSPGDPLV
Sbjct: 5 VANIQATSYFLRN--SSNISSNSCSPGDPLV 33
>SB_52745| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 162
Score = 31.9 bits (69), Expect = 0.56
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = -3
Query: 159 LAEFPITLLA*SVNHV*ISMCNVTCTLFFCRNC-LSIRLXETSCSPGDPLV 10
+ F TL+ S N S C++ T C + LSI SCSPGDPLV
Sbjct: 1 MKHFTDTLI--SANITFNSACSLVYTFKICTSRQLSITSTSNSCSPGDPLV 49
>SB_56430| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 31.1 bits (67), Expect = 0.99
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -3
Query: 69 RNCLSIRLXETSCSPGDPLV 10
R+ +SI L SCSPGDPLV
Sbjct: 26 RSTVSISLISNSCSPGDPLV 45
>SB_54757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 31.1 bits (67), Expect = 0.99
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -3
Query: 69 RNCLSIRLXETSCSPGDPLV 10
R+ +SI L SCSPGDPLV
Sbjct: 26 RSTVSISLISNSCSPGDPLV 45
>SB_47635| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 31.1 bits (67), Expect = 0.99
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -3
Query: 69 RNCLSIRLXETSCSPGDPLV 10
R+ +SI L SCSPGDPLV
Sbjct: 26 RSTVSISLISNSCSPGDPLV 45
>SB_43613| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 31.1 bits (67), Expect = 0.99
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -3
Query: 69 RNCLSIRLXETSCSPGDPLV 10
R+ +SI L SCSPGDPLV
Sbjct: 26 RSTVSISLISNSCSPGDPLV 45
>SB_43412| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 31.1 bits (67), Expect = 0.99
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -3
Query: 69 RNCLSIRLXETSCSPGDPLV 10
R+ +SI L SCSPGDPLV
Sbjct: 26 RSTVSISLISNSCSPGDPLV 45
>SB_31108| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 31.1 bits (67), Expect = 0.99
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -3
Query: 69 RNCLSIRLXETSCSPGDPLV 10
R+ +SI L SCSPGDPLV
Sbjct: 26 RSTVSISLISNSCSPGDPLV 45
>SB_21994| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 31.1 bits (67), Expect = 0.99
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -3
Query: 69 RNCLSIRLXETSCSPGDPLV 10
R+ +SI L SCSPGDPLV
Sbjct: 27 RSTVSISLISNSCSPGDPLV 46
>SB_8174| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 31.1 bits (67), Expect = 0.99
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -3
Query: 69 RNCLSIRLXETSCSPGDPLV 10
R+ +SI L SCSPGDPLV
Sbjct: 26 RSTVSISLISNSCSPGDPLV 45
>SB_4560| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 31.1 bits (67), Expect = 0.99
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -3
Query: 69 RNCLSIRLXETSCSPGDPLV 10
R+ +SI L SCSPGDPLV
Sbjct: 24 RSTVSISLISNSCSPGDPLV 43
>SB_50524| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 148
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -3
Query: 72 CRNCLSIRLXETSCSPGDPLV 10
C+ S+R SCSPGDPLV
Sbjct: 15 CKRAGSLRSRSNSCSPGDPLV 35
>SB_54339| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 153
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -3
Query: 96 NVTCTLFFCRNCLSIRLXETSCSPGDPLV 10
N+ C N L ++ SCSPGDPLV
Sbjct: 12 NIHCEKIQISNILIPKIASNSCSPGDPLV 40
>SB_35386| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 146
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -3
Query: 75 FCRNCLSIRLXETSCSPGDPLV 10
FCRN + + L + SPGDPLV
Sbjct: 12 FCRNFIDMALEASDYSPGDPLV 33
>SB_52100| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 150
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/23 (60%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Frame = -3
Query: 75 FCRNCLSI-RLXETSCSPGDPLV 10
F R C I R+ SCSPGDPLV
Sbjct: 15 FLRPCAVIMRITSNSCSPGDPLV 37
>SB_50444| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 143
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = -3
Query: 66 NCLSIRLXETSCSPGDPLV 10
N +SI SCSPGDPLV
Sbjct: 12 NIISIAFVSNSCSPGDPLV 30
>SB_2671| Best HMM Match : Amidohydro_2 (HMM E-Value=5.6)
Length = 270
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/27 (51%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = -3
Query: 87 CTLFFCRNCLSIRLXET-SCSPGDPLV 10
C + C SI L + SCSPGDPLV
Sbjct: 131 CFILHCNLLFSINLITSNSCSPGDPLV 157
>SB_12111| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 447
Score = 29.5 bits (63), Expect = 3.0
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -3
Query: 63 CLSIRLXETSCSPGDPLV 10
C I L SCSPGDPLV
Sbjct: 73 CKGILLTSNSCSPGDPLV 90
>SB_8543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 143
Score = 29.5 bits (63), Expect = 3.0
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -3
Query: 66 NCLSIRLXETSCSPGDPLV 10
N + I++ SCSPGDPLV
Sbjct: 12 NIILIKITSNSCSPGDPLV 30
>SB_43390| Best HMM Match : fn3 (HMM E-Value=9.3e-30)
Length = 1043
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +2
Query: 80 NVQVTLHIEIQTWFTLHASKVIGNSAKDRYVS 175
NVQ + + FT HA+K+ N AK+RYV+
Sbjct: 898 NVQFNKIMNARRLFTSHAAKLSHNRAKNRYVN 929
>SB_26762| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 195
Score = 29.5 bits (63), Expect = 3.0
Identities = 22/43 (51%), Positives = 22/43 (51%)
Frame = -3
Query: 138 LLA*SVNHV*ISMCNVTCTLFFCRNCLSIRLXETSCSPGDPLV 10
LLA VNHV S C V F C L SCSPGDPLV
Sbjct: 48 LLALFVNHVGRS-CEVVYQHFPC-------LISNSCSPGDPLV 82
>SB_7839| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 134
Score = 28.7 bits (61), Expect = 5.3
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -3
Query: 69 RNCLSIRLXETSCSPGDPLV 10
R C+++ SCSPGDPLV
Sbjct: 2 RPCVTMPRASNSCSPGDPLV 21
>SB_50750| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 144
Score = 28.7 bits (61), Expect = 5.3
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = -3
Query: 66 NCLSIRLXETSCSPGDPLV 10
N LS SCSPGDPLV
Sbjct: 13 NSLSYSFRSNSCSPGDPLV 31
>SB_25872| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 145
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = -3
Query: 90 TCTLFFCRNCLSIRLXETSCSPGDPLV 10
TC L +N L + SCSPGDPLV
Sbjct: 8 TCALQ--QNRLDLTFTSNSCSPGDPLV 32
>SB_9975| Best HMM Match : 7tm_2 (HMM E-Value=1.9e-38)
Length = 1101
Score = 28.7 bits (61), Expect = 5.3
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -3
Query: 57 SIRLXETSCSPGDPLV 10
S++L SCSPGDPLV
Sbjct: 658 SLQLASNSCSPGDPLV 673
>SB_99| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 965
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 80 NVQVTLHIEIQTWFTLHASKVIGNSAKDRY 169
NVQ + ++ FT HA+K+ N AK+RY
Sbjct: 681 NVQFKKIMNVRRSFTSHAAKLTHNRAKNRY 710
>SB_24611| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 142
Score = 28.3 bits (60), Expect = 7.0
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -3
Query: 57 SIRLXETSCSPGDPLV 10
S R+ SCSPGDPLV
Sbjct: 14 SFRVTSNSCSPGDPLV 29
>SB_1239| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 128
Score = 28.3 bits (60), Expect = 7.0
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -3
Query: 54 IRLXETSCSPGDPLV 10
+RL SCSPGDPLV
Sbjct: 1 MRLSSNSCSPGDPLV 15
>SB_50042| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 144
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 3/28 (10%)
Frame = -3
Query: 84 TLFFCRNCLSIR---LXETSCSPGDPLV 10
T F C N L ++ + SCSPGDPLV
Sbjct: 4 TNFDCENQLFVQGNCMKSNSCSPGDPLV 31
>SB_23012| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 210
Score = 28.3 bits (60), Expect = 7.0
Identities = 12/20 (60%), Positives = 15/20 (75%), Gaps = 2/20 (10%)
Frame = -3
Query: 63 CLSI--RLXETSCSPGDPLV 10
CL++ R+ SCSPGDPLV
Sbjct: 78 CLTLTQRIVSNSCSPGDPLV 97
>SB_14396| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 143
Score = 28.3 bits (60), Expect = 7.0
Identities = 16/31 (51%), Positives = 18/31 (58%)
Frame = -3
Query: 102 MCNVTCTLFFCRNCLSIRLXETSCSPGDPLV 10
M + T TL LS R+ SCSPGDPLV
Sbjct: 1 MKHFTDTLISANIVLS-RVSSNSCSPGDPLV 30
>SB_454| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 134
Score = 28.3 bits (60), Expect = 7.0
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = -3
Query: 60 LSIRLXETSCSPGDPLV 10
L IR SCSPGDPLV
Sbjct: 5 LVIRYISNSCSPGDPLV 21
>SB_57778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 138
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -3
Query: 75 FCRNCLSIRLXETSCSPGDPLV 10
F +S + SCSPGDPLV
Sbjct: 4 FTDTLISANIASNSCSPGDPLV 25
>SB_40583| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 138
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -3
Query: 75 FCRNCLSIRLXETSCSPGDPLV 10
F +S + SCSPGDPLV
Sbjct: 4 FTDTLISANILSNSCSPGDPLV 25
>SB_38078| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -3
Query: 72 CRNCLSIRLXETSCSPGDPLV 10
C+ I SCSPGDPLV
Sbjct: 25 CKKSQDISKTSNSCSPGDPLV 45
>SB_7024| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -3
Query: 96 NVTCTLFFCRNCLSIRLXETSCSPGDPLV 10
N T + +N ++L SCSPGDPLV
Sbjct: 19 NTTFSTLKTKNA-PLKLSSNSCSPGDPLV 46
>SB_59124| Best HMM Match : Bac_luciferase (HMM E-Value=1.6)
Length = 1953
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +2
Query: 476 NYRFAESPKKQVHEKYYL 529
N R A PKKQ H KYY+
Sbjct: 213 NLRLATQPKKQKHIKYYI 230
>SB_55801| Best HMM Match : EPTP (HMM E-Value=0.24)
Length = 426
Score = 27.9 bits (59), Expect = 9.2
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = -2
Query: 382 SLPVQWSATRGELHEAL*LFSYVSSAKSLVQARNILLFCLVR 257
SL +W+ R +H+ L + Y+SSA+++ + L L +
Sbjct: 273 SLAFRWTGDRFMMHQQLPIGGYISSAETMHMGNDTFLLFLAK 314
>SB_55208| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 138
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -3
Query: 75 FCRNCLSIRLXETSCSPGDPLV 10
F +S + SCSPGDPLV
Sbjct: 4 FTDTLISANIGSNSCSPGDPLV 25
>SB_50748| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 138
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -3
Query: 75 FCRNCLSIRLXETSCSPGDPLV 10
F +S + SCSPGDPLV
Sbjct: 4 FTDTLISANIISNSCSPGDPLV 25
>SB_48029| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 138
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -3
Query: 75 FCRNCLSIRLXETSCSPGDPLV 10
F +S + SCSPGDPLV
Sbjct: 4 FTDTLISANITSNSCSPGDPLV 25
>SB_38869| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 138
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -3
Query: 75 FCRNCLSIRLXETSCSPGDPLV 10
F +S + SCSPGDPLV
Sbjct: 4 FTDTLISANIPSNSCSPGDPLV 25
>SB_37889| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 110
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -3
Query: 75 FCRNCLSIRLXETSCSPGDPLV 10
F +S + SCSPGDPLV
Sbjct: 4 FTDTLISANIQSNSCSPGDPLV 25
>SB_24786| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 151
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -3
Query: 51 RLXETSCSPGDPLV 10
RL SCSPGDPLV
Sbjct: 25 RLVSNSCSPGDPLV 38
>SB_22515| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 138
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -3
Query: 75 FCRNCLSIRLXETSCSPGDPLV 10
F +S + SCSPGDPLV
Sbjct: 4 FTDTLISANIRSNSCSPGDPLV 25
>SB_21334| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 134
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = -3
Query: 72 CRNCLSIRLXETSCSPGDPLV 10
C LS+R SCSPGDPLV
Sbjct: 2 CHVSLSLRA-SNSCSPGDPLV 21
>SB_19004| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 138
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -3
Query: 75 FCRNCLSIRLXETSCSPGDPLV 10
F +S + SCSPGDPLV
Sbjct: 4 FTDTLISANIVSNSCSPGDPLV 25
>SB_17133| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 138
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -3
Query: 78 FFCRNCLSIRLXETSCSPGDPLV 10
F R+ ++ + SCSPGDPLV
Sbjct: 3 FLRRSLVTDEIRSNSCSPGDPLV 25
>SB_13835| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 149
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/41 (31%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +2
Query: 551 YTGYLNIKRDV-VQFAHSVDVREHHVQCKSWFDQL*RANKY 670
+ + N R++ Q + + DVREH V+ ++W ++L N Y
Sbjct: 101 FAKFANTVREIREQRSGTADVREHSVREQTWTNRLTNGNSY 141
>SB_8834| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 138
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -3
Query: 75 FCRNCLSIRLXETSCSPGDPLV 10
F +S + SCSPGDPLV
Sbjct: 4 FTDTLISANIGSNSCSPGDPLV 25
>SB_7598| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 138
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -3
Query: 75 FCRNCLSIRLXETSCSPGDPLV 10
F +S + SCSPGDPLV
Sbjct: 4 FTDTLISANIISNSCSPGDPLV 25
>SB_3084| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 138
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -3
Query: 75 FCRNCLSIRLXETSCSPGDPLV 10
F +S + SCSPGDPLV
Sbjct: 4 FTDTLISANIPSNSCSPGDPLV 25
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,783,423
Number of Sequences: 59808
Number of extensions: 373403
Number of successful extensions: 2091
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 2065
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2091
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2010148439
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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