Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0439
         (743 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g40990.1 68418.m04983 GDSL-motif lipase/hydrolase family prot...    28   5.7  
At1g29470.1 68414.m03605 dehydration-responsive protein-related ...    27   9.9  

>At5g40990.1 68418.m04983 GDSL-motif lipase/hydrolase family protein
           similar to lipase [Arabidopsis thaliana] GI:1145627;
           contains Pfam profile PF00657: Lipase/Acylhydrolase with
           GDSL-like motif
          Length = 374

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +3

Query: 579 MSFSLLIVLTFVNITYNVKVGSINCNEQINI 671
           M  S L+ +TF+  T  + +GSINC +  N+
Sbjct: 1   MENSQLVSITFLAYTIIISIGSINCIDNNNL 31


>At1g29470.1 68414.m03605 dehydration-responsive protein-related
           similar to early-responsive to dehydration stress ERD3
           protein [Arabidopsis thaliana] GI:15320410; contains
           Pfam profile PF03141: Putative methyltransferase
          Length = 770

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -1

Query: 638 NFYIVRDVHERQHYEQTERH 579
           N+  +R +H  +HYE  ERH
Sbjct: 257 NWQAIRKLHSTKHYEHRERH 276


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,636,130
Number of Sequences: 28952
Number of extensions: 252774
Number of successful extensions: 418
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 413
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 418
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1643603136
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)