Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0438
         (728 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    27   0.21 
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    27   0.21 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   1.4  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    22   4.4  
AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    21   7.7  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    21   7.7  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 26.6 bits (56), Expect = 0.21
 Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 6/48 (12%)
 Frame = +1

Query: 208 VSVIIAWHRQVD*ETSRAPVY-TNKY-----IMCVHVFLIIVFYTSLD 333
           VS+++  H     +T R  V  TNKY     +  + VF+I+V+Y SLD
Sbjct: 296 VSLLLGPHPTYFGKTGRKTVLKTNKYCNFIILFYLSVFVILVYYASLD 343


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 26.6 bits (56), Expect = 0.21
 Identities = 14/48 (29%), Positives = 28/48 (58%)
 Frame = +2

Query: 206 ELVSLSRGTDKSTEKRLERQFIQINILCVFMYF*LSYFTRLSMRYDNV 349
           EL+  + G  ++  K+L+  F  I +L + +YF L  F+RL+   +++
Sbjct: 429 ELLVGNLGMRRNFRKKLDFIFTFITLLTIGLYFQLCEFSRLNFSVEHL 476


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = -1

Query: 110 YLYLYVQYELCSFEFVYNFVVFKMTCVTY 24
           ++   V + LC++ F Y F++  + CV Y
Sbjct: 89  FIIFTVHFLLCTYYFYYAFII--LLCVYY 115



 Score = 21.4 bits (43), Expect = 7.7
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -1

Query: 110 YLYLYVQYELCSFEFVYNFVVF 45
           Y Y      LC + F Y F++F
Sbjct: 102 YFYYAFIILLCVYYFYYAFIIF 123


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = -1

Query: 497 SPRPPRHRY*TISN 456
           SP PP H Y  ISN
Sbjct: 120 SPGPPSHPYTVISN 133


>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = +2

Query: 470 SNGGEGAAGTRACRRPWTSAEMQTKHL 550
           ++ GE     R C++ ++ +   TKHL
Sbjct: 71  THSGERPYRCRLCKKAFSDSSTLTKHL 97


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = +2

Query: 470 SNGGEGAAGTRACRRPWTSAEMQTKHL 550
           ++ GE     R C++ ++ +   TKHL
Sbjct: 327 THSGERPYRCRLCKKAFSDSSTLTKHL 353


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,217
Number of Sequences: 336
Number of extensions: 3329
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)