Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0438
         (728 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL009193-3|CAA15694.2|  991|Drosophila melanogaster EG:103B4.4 p...    29   6.5  
AE014298-361|AAF45751.3|  448|Drosophila melanogaster CG33548-PB...    29   6.5  
AE014297-1902|AAX52952.1| 1357|Drosophila melanogaster CG33555-P...    29   6.5  

>AL009193-3|CAA15694.2|  991|Drosophila melanogaster EG:103B4.4
           protein.
          Length = 991

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +3

Query: 534 CKLNICSECRFNTSRIIECTL 596
           C L +CSECR +T   +EC L
Sbjct: 110 CGLPVCSECRDSTRHDLECKL 130


>AE014298-361|AAF45751.3|  448|Drosophila melanogaster CG33548-PB,
           isoform B protein.
          Length = 448

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +3

Query: 534 CKLNICSECRFNTSRIIECTL 596
           C L +CSECR +T   +EC L
Sbjct: 110 CGLPVCSECRDSTRHDLECKL 130


>AE014297-1902|AAX52952.1| 1357|Drosophila melanogaster CG33555-PA,
           isoform A protein.
          Length = 1357

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
 Frame = +3

Query: 480 ARGPRGLGPAVARGHRQR-CKLNICSECRFNTSRIIE--CTLC 599
           AR    LG    RG   R CKL +C  CR  TSR  +  C +C
Sbjct: 29  ARCTTELGRITNRGAPCRVCKLRVCKACREFTSRTTDWVCVVC 71


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,496,699
Number of Sequences: 53049
Number of extensions: 586776
Number of successful extensions: 1551
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1507
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1551
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3273062859
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)