Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0438
         (728 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    25   0.97 
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             24   1.7  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    23   2.9  
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    22   5.2  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    22   6.8  

>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 24.6 bits (51), Expect = 0.97
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -2

Query: 178 HGSNDTVLQACVCVQAGRVHGNLIF 104
           H   D V+ AC  V +G  HGN I+
Sbjct: 526 HPPADLVVYACNVVGSGLSHGNWIY 550


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = -1

Query: 683  GGARGSTDRGACATGQRELLTEPTP 609
            GG  G    G     Q+ ++T+P+P
Sbjct: 967  GGGMGGCQPGGVVQSQQPIMTDPSP 991


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = -2

Query: 553 LQMFSLHLCRCPRATAGPSPRGP 485
           LQ  SL L   PR   GP  +GP
Sbjct: 43  LQCASLKLAFEPRRNPGPGSKGP 65


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 16  GFKYVTHVILKTTKL*TNSNEHN 84
           G+KY+T +I K  K+      HN
Sbjct: 311 GYKYITPLIQKHLKIHDTCGVHN 333


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -2

Query: 487 PLATVTKQYQTSLSFTQKHFLQH 419
           P+A V    Q+ L   Q+HF  H
Sbjct: 899 PVAVVKSSAQSLLQSNQQHFPHH 921


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,711
Number of Sequences: 438
Number of extensions: 3817
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22657590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)