Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0435
(681 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_52425| Best HMM Match : Arm (HMM E-Value=9.7e-28) 215 3e-56
SB_20122| Best HMM Match : Arm (HMM E-Value=1.2e-24) 153 1e-37
SB_29650| Best HMM Match : Arm (HMM E-Value=7.30076e-43) 142 3e-34
SB_2550| Best HMM Match : No HMM Matches (HMM E-Value=.) 106 1e-23
SB_35833| Best HMM Match : No HMM Matches (HMM E-Value=.) 76 3e-14
SB_3360| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 4e-14
SB_22229| Best HMM Match : Arm (HMM E-Value=0) 49 3e-06
SB_19563| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 4e-05
SB_53106| Best HMM Match : PLAT (HMM E-Value=0) 36 0.030
SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.37
SB_16018| Best HMM Match : Antimicrobial18 (HMM E-Value=0.89) 31 0.86
SB_57766| Best HMM Match : MFS_1 (HMM E-Value=2.4e-14) 30 2.0
SB_27138| Best HMM Match : Ebp2 (HMM E-Value=1.8) 30 2.0
SB_17370| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_51335| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_46444| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_22495| Best HMM Match : DUF116 (HMM E-Value=8.1) 29 4.6
SB_52978| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_47670| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_38184| Best HMM Match : HisKA_2 (HMM E-Value=8.6) 29 4.6
SB_45305| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_5831| Best HMM Match : TolA (HMM E-Value=0.0037) 28 6.1
SB_46871| Best HMM Match : PAN (HMM E-Value=1) 28 6.1
SB_27445| Best HMM Match : DUF227 (HMM E-Value=9.9) 28 6.1
SB_15433| Best HMM Match : Arm (HMM E-Value=9.7) 28 6.1
SB_41168| Best HMM Match : Borrelia_orfA (HMM E-Value=0.77) 28 8.0
SB_21701| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
SB_17763| Best HMM Match : IBN_N (HMM E-Value=3.4e-20) 28 8.0
SB_5618| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
SB_33578| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00076) 28 8.0
SB_30637| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
SB_24364| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
SB_11650| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
>SB_52425| Best HMM Match : Arm (HMM E-Value=9.7e-28)
Length = 234
Score = 215 bits (525), Expect = 3e-56
Identities = 113/189 (59%), Positives = 134/189 (70%)
Frame = +3
Query: 114 KREETLQKRRNVPISYSTDEEEIDKNLATTDLDELVMNAANAENPEAQLAAVQQCRKLLS 293
KRE+ +QKRRNVP+ +E D+ DL+ +VM A + ++P QL AVQ RKLLS
Sbjct: 2 KREDCMQKRRNVPLELP---DEKDEKFQRRDLNAIVMEAGS-DDPSVQLGAVQAARKLLS 57
Query: 294 CDKNPPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVP 473
DKNPPID+LI N +LQFE AWALTNIASGTS QT VV+AGAVP
Sbjct: 58 KDKNPPIDDLI----------------NHSLQFEAAWALTNIASGTSEQTQAVVNAGAVP 101
Query: 474 VFLQLLMSPHENVCDQAVWALGNIIGDGPVLRDFVIELGVVKPLLSLIKSDIPIPFLRNV 653
FL+LL SP ++VC+QAVWALGNI+GDGPVLRDFVI GVVKPLL + +PI FLRNV
Sbjct: 102 FFLKLLNSPRQHVCEQAVWALGNIVGDGPVLRDFVIGYGVVKPLLKFVNPGVPITFLRNV 161
Query: 654 TWVIVNLCR 680
TWV+VNLCR
Sbjct: 162 TWVLVNLCR 170
>SB_20122| Best HMM Match : Arm (HMM E-Value=1.2e-24)
Length = 163
Score = 153 bits (372), Expect = 1e-37
Identities = 79/139 (56%), Positives = 96/139 (69%)
Frame = +3
Query: 264 AVQQCRKLLSCDKNPPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQT 443
+VQ RK+LS +K+PPID++I NP LQFE AWALTNIASGTS QT
Sbjct: 13 SVQSVRKMLSKEKSPPIDDVI----------------NPLLQFEAAWALTNIASGTSEQT 56
Query: 444 NKVVHAGAVPVFLQLLMSPHENVCDQAVWALGNIIGDGPVLRDFVIELGVVKPLLSLIKS 623
V GAVP+F++LL S H+NV +QAVWALGNI GDGP++R+ VI G + PLL+LIK
Sbjct: 57 KAVQEGGAVPMFVKLLSSVHDNVAEQAVWALGNIAGDGPLMRNTVIACGALGPLLALIKP 116
Query: 624 DIPIPFLRNVTWVIVNLCR 680
I FLRNVTW + NLCR
Sbjct: 117 STSIQFLRNVTWTLSNLCR 135
>SB_29650| Best HMM Match : Arm (HMM E-Value=7.30076e-43)
Length = 215
Score = 142 bits (343), Expect = 3e-34
Identities = 66/102 (64%), Positives = 78/102 (76%)
Frame = +3
Query: 375 NPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHENVCDQAVWALGNIIGD 554
+P LQFE AWALTNIASGTS QT V GAVP+F++LL S H+NV +QAVWALGNI GD
Sbjct: 18 HPLLQFEAAWALTNIASGTSEQTKAVQEGGAVPMFVKLLSSVHDNVAEQAVWALGNIAGD 77
Query: 555 GPVLRDFVIELGVVKPLLSLIKSDIPIPFLRNVTWVIVNLCR 680
GP++R+ VI G + PLL+LIK I FLRNVTW + NLCR
Sbjct: 78 GPLMRNTVIACGALGPLLALIKPSTSIQFLRNVTWTLSNLCR 119
Score = 53.6 bits (123), Expect = 1e-07
Identities = 27/83 (32%), Positives = 44/83 (53%)
Frame = +3
Query: 297 DKNPPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPV 476
+KNPP D +LP + + + D L +T WAL+ + G + + V+ +G VP
Sbjct: 120 NKNPPPDVTAVQQVLPAIARLILSDDKEVLA-DTCWALSYLTDGVNERIQLVLDSGVVPK 178
Query: 477 FLQLLMSPHENVCDQAVWALGNI 545
++LL P NV +A WA+ N+
Sbjct: 179 LVELLGYPEVNVL-EAAWAISNV 200
Score = 35.5 bits (78), Expect = 0.040
Identities = 28/119 (23%), Positives = 50/119 (42%), Gaps = 1/119 (0%)
Frame = +3
Query: 321 LIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSP 500
+IA G L L+ + + + W L+N+ + + +P +L++S
Sbjct: 85 VIACGALGPLLALIKPSTSIQFLRNVTWTLSNLCRNKNPPPDVTAVQQVLPAIARLILSD 144
Query: 501 HENVCDQAVWALGNIIGDGPVLR-DFVIELGVVKPLLSLIKSDIPIPFLRNVTWVIVNL 674
+ V WAL + + DG R V++ GVV L+ L+ P + W I N+
Sbjct: 145 DKEVLADTCWAL-SYLTDGVNERIQLVLDSGVVPKLVELL--GYPEVNVLEAAWAISNV 200
Score = 32.7 bits (71), Expect = 0.28
Identities = 16/46 (34%), Positives = 28/46 (60%)
Frame = +3
Query: 303 NPPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQ 440
N I ++ +G++P LV+ L + L E AWA++N+ +GT+ Q
Sbjct: 164 NERIQLVLDSGVVPKLVELLGYPEVNVL--EAAWAISNVTAGTAQQ 207
>SB_2550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 929
Score = 106 bits (255), Expect = 1e-23
Identities = 74/203 (36%), Positives = 109/203 (53%), Gaps = 6/203 (2%)
Frame = +3
Query: 27 RMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDKNLATTD 206
R+ +KN DV EMRRRR E V+LRK KREE + KRRNV ++ ++ + L T+D
Sbjct: 689 RIKAYKNKSLDVSEMRRRREEEGVQLRKAKREEQMFKRRNVEVTRTSSTGSELEELLTSD 748
Query: 207 ------LDELVMNAANAENPEAQLAAVQQCRKLLSCDKNPPIDELIAAGILPILVQCLSR 368
L + ++ A +++ E QLAA Q+ RK+LS + NPPID++I G++P V+ L R
Sbjct: 749 YMAEGPLFQDMVQAIISDDVEMQLAATQRFRKILSKEPNPPIDDVIKCGVIPKFVEFLQR 808
Query: 369 ADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHENVCDQAVWALGNII 548
DN ALQ L S T+ V A LL P+E + QAV G +
Sbjct: 809 EDNSALQVSPCLPL---LSRLLFSTDAEVLADTCWALSYLLDGPNEKI--QAVIDSG-VC 862
Query: 549 GDGPVLRDFVIELGVVKPLLSLI 617
L ++++ G ++PL L+
Sbjct: 863 RRLVELLEYIVSQGAIRPLCDLL 885
>SB_35833| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1032
Score = 75.8 bits (178), Expect = 3e-14
Identities = 33/44 (75%), Positives = 36/44 (81%)
Frame = +3
Query: 549 GDGPVLRDFVIELGVVKPLLSLIKSDIPIPFLRNVTWVIVNLCR 680
GDGPVLRDFVI GVVKPLL + +PI FLRNVTWV+VNLCR
Sbjct: 790 GDGPVLRDFVIGYGVVKPLLKFVNPGVPITFLRNVTWVLVNLCR 833
Score = 48.8 bits (111), Expect = 4e-06
Identities = 35/123 (28%), Positives = 55/123 (44%)
Frame = +3
Query: 306 PPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQ 485
PPID + +LP L + D L A+ NI +GT QT V++ GA+ F
Sbjct: 839 PPIDTI--REVLPALALLIHHQD---LDTAALRAVGNIVTGTDEQTQVVLNHGALSHFTG 893
Query: 486 LLMSPHENVCDQAVWALGNIIGDGPVLRDFVIELGVVKPLLSLIKSDIPIPFLRNVTWVI 665
LL E + +AVW L NI VI+ G++ ++ +++ + W I
Sbjct: 894 LLTHHKEKIKKEAVWFLSNITAGNQSQVQEVIDAGLIPLIIQTLETG-EFQTQKEAAWAI 952
Query: 666 VNL 674
N+
Sbjct: 953 SNM 955
>SB_3360| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 205
Score = 75.4 bits (177), Expect = 4e-14
Identities = 56/198 (28%), Positives = 92/198 (46%)
Frame = +3
Query: 27 RMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDKNLATTD 206
R ++K G V R RR +LRK +RE L +R I ++ +E E +++
Sbjct: 3 RKDLYKQGGHSVQAQRSRRRGQEADLRKERRERLLSSKR---IRFAEEEAE-EEDFTVEQ 58
Query: 207 LDELVMNAANAENPEAQLAAVQQCRKLLSCDKNPPIDELIAAGILPILVQCLSRADNPAL 386
+ + A + L ++ RK + + L +V L+ N L
Sbjct: 59 VRDYAK--AIQKYDSNTLHCLRSLRKAFAQGSELISAFMGVENGLRSVVGYLT-GHNIDL 115
Query: 387 QFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHENVCDQAVWALGNIIGDGPVL 566
Q E AW +TN+++GT T +V+ A A P + L + ++ DQ WALGN+ GD
Sbjct: 116 QLEAAWCITNLSAGTHEDTLRVLKAAA-PYLITYLSGQNLSLQDQCAWALGNMSGDSVEC 174
Query: 567 RDFVIELGVVKPLLSLIK 620
RD + G+V P+ +L+K
Sbjct: 175 RDLLRAQGIVPPMANLLK 192
>SB_22229| Best HMM Match : Arm (HMM E-Value=0)
Length = 1050
Score = 49.2 bits (112), Expect = 3e-06
Identities = 32/99 (32%), Positives = 47/99 (47%)
Frame = +3
Query: 321 LIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSP 500
++ G L LV CL D P ++ AWAL IA + + VV AGAVP+ + + P
Sbjct: 119 VVDCGALDALVICLEEFD-PGVKEAAAWALGYIARHNAELSQAVVDAGAVPLLVLCIQEP 177
Query: 501 HENVCDQAVWALGNIIGDGPVLRDFVIELGVVKPLLSLI 617
+ A AL +I P L V++ G + L +I
Sbjct: 178 ELALKRIASSALSDICKHSPELAQTVVDAGAIAHLAQMI 216
Score = 41.9 bits (94), Expect = 5e-04
Identities = 33/122 (27%), Positives = 54/122 (44%)
Frame = +3
Query: 315 DELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLM 494
+ ++ A ILP LV L+ N + A+ L +A ++ VV GA+ + L
Sbjct: 75 EAVVKADILPQLVYSLAE-QNRFYKKAAAFVLRAVAKHSAQHAQCVVDCGALDALVICLE 133
Query: 495 SPHENVCDQAVWALGNIIGDGPVLRDFVIELGVVKPLLSLIKSDIPIPFLRNVTWVIVNL 674
V + A WALG I L V++ G V PLL L + + R + + ++
Sbjct: 134 EFDPGVKEAAAWALGYIARHNAELSQAVVDAGAV-PLLVLCIQEPELALKRIASSALSDI 192
Query: 675 CR 680
C+
Sbjct: 193 CK 194
Score = 39.5 bits (88), Expect = 0.002
Identities = 26/100 (26%), Positives = 49/100 (49%)
Frame = +3
Query: 321 LIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSP 500
++ AG +P+LV C+ + AL+ + AL++I + VV AGA+ Q++++
Sbjct: 161 VVDAGAVPLLVLCIQEPEL-ALKRIASSALSDICKHSPELAQTVVDAGAIAHLAQMILNT 219
Query: 501 HENVCDQAVWALGNIIGDGPVLRDFVIELGVVKPLLSLIK 620
+ Q AL I L + V+E + +L+ +K
Sbjct: 220 DAKLKRQVFSALSQIAKHSVDLAEMVVEAEIFPAVLNCLK 259
>SB_19563| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 208
Score = 45.6 bits (103), Expect = 4e-05
Identities = 27/96 (28%), Positives = 52/96 (54%)
Frame = +3
Query: 336 ILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHENVC 515
+L ++ CL ++ + ++ E+ W L+N+ +G + VVHAG VPV +++L S ++
Sbjct: 20 LLHAVMACL-QSSHRHVRKESLWVLSNLTAGPAESCWAVVHAGLVPVTVKMLASEAFDIK 78
Query: 516 DQAVWALGNIIGDGPVLRDFVIELGVVKPLLSLIKS 623
+ L NI GP V++ ++ + L+KS
Sbjct: 79 KEVALTLCNISYHGPDCLKVVLDCRGMEGFVHLLKS 114
>SB_53106| Best HMM Match : PLAT (HMM E-Value=0)
Length = 1790
Score = 35.9 bits (79), Expect = 0.030
Identities = 17/40 (42%), Positives = 26/40 (65%)
Frame = +3
Query: 333 GILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKV 452
G +PI+V+CLS N ++F A L N++SGT + NK+
Sbjct: 1216 GGIPIVVRCLSH-QNDQVRFAAACVLRNLSSGTKSDQNKL 1254
>SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5222
Score = 32.3 bits (70), Expect = 0.37
Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 4/97 (4%)
Frame = +3
Query: 63 DEMRRRRNEVTVEL-RKNKREETLQKRRNVPISYSTDEEEIDK---NLATTDLDELVMNA 230
+++RRRR E L RK K E K R I D E + K + T + E +
Sbjct: 3892 EKLRRRREEKEAALLRKQKEEAAKSKIRLDDIESKADVETLIKRQEGVQDTIIQEEITGT 3951
Query: 231 ANAENPEAQLAAVQQCRKLLSCDKNPPIDELIAAGIL 341
A +E +A + + R+ + + +D+L+A+G L
Sbjct: 3952 ARSEG-QASNEEIGEYRRRMGDNFCSTVDDLVASGQL 3987
>SB_16018| Best HMM Match : Antimicrobial18 (HMM E-Value=0.89)
Length = 1494
Score = 31.1 bits (67), Expect = 0.86
Identities = 23/55 (41%), Positives = 34/55 (61%), Gaps = 4/55 (7%)
Frame = -3
Query: 322 SSSIGGFLSHESSFLHCCTAANCASGF----SALAAFITSSSRSVVARFLSISSS 170
SSS+ FLS SS T+++ S F S+L+ F+TSS S+++ F+S SSS
Sbjct: 331 SSSLSDFLSLSSSLSDFLTSSSLPSDFLTSSSSLSDFLTSS--SLLSDFISSSSS 383
>SB_57766| Best HMM Match : MFS_1 (HMM E-Value=2.4e-14)
Length = 499
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = -3
Query: 346 MGSIPAAMSSSIGGFLSHESSFLHCCTAANCASGFSALAAFITSSSRSVVARFLSIS 176
+GS+ A+S +G + + T CAS SA+ F+TS S+ +L+ S
Sbjct: 74 VGSLALALSIGLGPVFAKLINSFGARTVTICASVVSAVGLFVTSQVNSLPLMYLTYS 130
>SB_27138| Best HMM Match : Ebp2 (HMM E-Value=1.8)
Length = 841
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +3
Query: 168 DEEEIDKNLATTDLDELVMNAANAENPEAQLAAVQQCRKLLSCDKNPPIDELI 326
++EE+ A L+E V+NAA N L+A++ C K + D P +++
Sbjct: 336 EDEELILQFAEYLLEERVLNAATVSN---HLSAIEYCLKYIHKDSAPVFPDVV 385
>SB_17370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1743
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/56 (30%), Positives = 23/56 (41%)
Frame = -2
Query: 206 VGGSEVLVDLLLIGRIANGHITPFLKCFLSFVFS*LDCDFIPSPAHFIDIFACILE 39
+GG+ V +D +IGRI FL CF + C P H C+ E
Sbjct: 1488 IGGTSVSLDHRMIGRITRKFFVDFL-CFRNTAILRSSCKLQYLPIHVSGFSRCLFE 1542
>SB_51335| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 576
Score = 29.5 bits (63), Expect = 2.6
Identities = 28/104 (26%), Positives = 48/104 (46%), Gaps = 3/104 (2%)
Frame = +3
Query: 21 EKRMHV-FKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEI--DKN 191
+KR V K K +E R E ++RK K+E+ +KR+ V +++ EEE+ K
Sbjct: 130 QKRKKVQSKTNNKSDNEEEDERQEK--KIRKQKQEK--RKRKTVKADFNSSEEEVSSQKT 185
Query: 192 LATTDLDELVMNAANAENPEAQLAAVQQCRKLLSCDKNPPIDEL 323
A++ D+ MN A + + + S D+ + EL
Sbjct: 186 KASSRKDQKKMNKQMANKGKGAKSKKKTIESNSSDDEEGQVAEL 229
>SB_46444| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 725
Score = 29.5 bits (63), Expect = 2.6
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Frame = +3
Query: 348 LVQCLSRADNPALQFETAWALTN-IASGTSAQTNKVVHAGAVPVFLQLLMSPHENVCDQA 524
L+ L ++ NP +Q AWA+ I + A G + + + LL S + V
Sbjct: 544 LLWSLLKSTNPRVQASAAWAICPCIENAKDAGEMVRSFVGGLELIVSLLKSNDQEVLASV 603
Query: 525 VWALGNIIGDGPVLRDFVIELGVVKPLLSLIKS 623
A+ NI D L + + GVV P+L+ + S
Sbjct: 604 CAAIANIAKDEENLA-VITDHGVV-PMLAKLAS 634
>SB_22495| Best HMM Match : DUF116 (HMM E-Value=8.1)
Length = 440
Score = 28.7 bits (61), Expect = 4.6
Identities = 17/56 (30%), Positives = 23/56 (41%)
Frame = -2
Query: 206 VGGSEVLVDLLLIGRIANGHITPFLKCFLSFVFS*LDCDFIPSPAHFIDIFACILE 39
+GG+ V +D +IGRI FL CF + C P H C+ E
Sbjct: 341 IGGTSVSLDHRMIGRITRKLFVDFL-CFRNTAILRSSCKLQYLPIHVSGFSRCLFE 395
>SB_52978| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 879
Score = 28.7 bits (61), Expect = 4.6
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Frame = +3
Query: 15 SSEKRMHVFKNAGKDVD-----EMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEE 179
SS+K ++ GKDVD E+RR+R E + +REE + RR + +EEE
Sbjct: 450 SSDKE--TVRSDGKDVDDSGSLELRRQREEARRLEEQRRREEEERTRREKEEAQRREEEE 507
>SB_47670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 566
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +3
Query: 36 VFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEE 179
V+K A + R+R+E T E++K + +KRR + S +EEE
Sbjct: 123 VYKLAVLSAGKKIRKRHEKTTEMQKQTKMVPRKKRRVLSSSEEEEEEE 170
>SB_38184| Best HMM Match : HisKA_2 (HMM E-Value=8.6)
Length = 528
Score = 28.7 bits (61), Expect = 4.6
Identities = 17/56 (30%), Positives = 23/56 (41%)
Frame = -2
Query: 206 VGGSEVLVDLLLIGRIANGHITPFLKCFLSFVFS*LDCDFIPSPAHFIDIFACILE 39
+GG+ V +D +IGRI FL CF + C P H C+ E
Sbjct: 394 IGGTSVSLDHRMIGRITRKLFVDFL-CFRNTAILRSSCKLQYLPIHVSGFSRCLFE 448
>SB_45305| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 593
Score = 28.3 bits (60), Expect = 6.1
Identities = 14/65 (21%), Positives = 30/65 (46%)
Frame = +3
Query: 33 HVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDKNLATTDLD 212
H A + +DE R+R+++ V ++ + EE L+ N ++ + E + + +
Sbjct: 238 HDKSQANRSIDEDRKRKSDELVSVKGDSEEEGLENVENTDVNGNEGPEAKKRKVIYQENS 297
Query: 213 ELVMN 227
L N
Sbjct: 298 GLAQN 302
>SB_5831| Best HMM Match : TolA (HMM E-Value=0.0037)
Length = 703
Score = 28.3 bits (60), Expect = 6.1
Identities = 21/81 (25%), Positives = 38/81 (46%)
Frame = +3
Query: 42 KNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDKNLATTDLDELV 221
+ A K +E R+R E +K K+EE L++++ + +E+E + L + +
Sbjct: 260 EEAEKKREEEERKRREEEEAAQKWKKEELLRQQQ---LEREKEEQERAERLQREREEAME 316
Query: 222 MNAANAENPEAQLAAVQQCRK 284
E EA+ AA + RK
Sbjct: 317 AEDLAEEAAEAEAAAAEAARK 337
>SB_46871| Best HMM Match : PAN (HMM E-Value=1)
Length = 525
Score = 28.3 bits (60), Expect = 6.1
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +3
Query: 90 VTVELRKNKREETLQKRRNVPISYSTDEEEIDKNLATTD 206
V ++ R N QK+ N+P S D E ID++L D
Sbjct: 380 VRLDSRTNSSSSKRQKKTNLPKSGENDVEIIDRSLVRDD 418
>SB_27445| Best HMM Match : DUF227 (HMM E-Value=9.9)
Length = 129
Score = 28.3 bits (60), Expect = 6.1
Identities = 17/56 (30%), Positives = 23/56 (41%)
Frame = -2
Query: 206 VGGSEVLVDLLLIGRIANGHITPFLKCFLSFVFS*LDCDFIPSPAHFIDIFACILE 39
+GG+ V +D +IGRI FL CF + C P H C+ E
Sbjct: 5 IGGTSVSLDHRMIGRITRKLFVDFL-CFCNTAILRSSCKLQYLPIHVSVFSRCLFE 59
>SB_15433| Best HMM Match : Arm (HMM E-Value=9.7)
Length = 237
Score = 28.3 bits (60), Expect = 6.1
Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Frame = +3
Query: 162 STDEEEIDKNLATTDLDELVMNAANAENPEAQ-LAAVQQCRKLLSCDKNPPID---ELIA 329
S +E E+ N A L L + A E L+ Q RKL+ C + I ++
Sbjct: 56 SVNELEVSYNAAGI-LCHLASDGPTAWTAETMSLSRGQAMRKLIDCVEKWDIGATRQMSY 114
Query: 330 AGILPILVQCLSRADNPALQFETAWALTNIAS 425
PIL + + + + PA+Q WAL N+ +
Sbjct: 115 RSFGPIL-RLIPKYETPAIQHWATWALANLCN 145
>SB_41168| Best HMM Match : Borrelia_orfA (HMM E-Value=0.77)
Length = 738
Score = 27.9 bits (59), Expect = 8.0
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +3
Query: 21 EKRMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRR 143
E+R ++ K D RRR+ E + R++++ Q+RR
Sbjct: 231 ERRRYILKQQRLDAIRKRRRQRERLLRRRRDRQRRLRQRRR 271
>SB_21701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1906
Score = 27.9 bits (59), Expect = 8.0
Identities = 19/68 (27%), Positives = 29/68 (42%)
Frame = +3
Query: 15 SSEKRMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDKNL 194
S K KD DEMRR ++T +LR+ + L + + S + +K
Sbjct: 1532 SMRKENEALATKCKDADEMRRNIIKLTTQLREADKAR-LNQGEIDDLKLSLSISQAEKQQ 1590
Query: 195 ATTDLDEL 218
T +DEL
Sbjct: 1591 LQTRIDEL 1598
>SB_17763| Best HMM Match : IBN_N (HMM E-Value=3.4e-20)
Length = 681
Score = 27.9 bits (59), Expect = 8.0
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 1/87 (1%)
Frame = +3
Query: 417 IASGTSAQTNKVVHAGAVPVFLQLLMSPHENVCDQAVWALGNIIGDGPVLRDFVIELGVV 596
I G +T + A+PV Q + V D A W LG + P + + E +V
Sbjct: 316 ILEGPDPKTLQPFVENALPVIAQQMKDESVVVRDSAAWVLGRVCEIMPHIA--INEKYLV 373
Query: 597 KPLLSLIKSDIPIP-FLRNVTWVIVNL 674
+ +L++S I P NV W +L
Sbjct: 374 LVVTTLLESLIAEPRVASNVCWAFSSL 400
>SB_5618| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 801
Score = 27.9 bits (59), Expect = 8.0
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +3
Query: 135 KRRNVPISYSTDEEEIDKNLATTDLDELVMNAANAENPEAQLAAVQQCR 281
K N+P + +T +EE L T D E +N N+ + + L A+Q +
Sbjct: 19 KENNLPRTLATLQEETGITLNTVDSVESFVNEINSGHWDTVLTAIQSLK 67
>SB_33578| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00076)
Length = 888
Score = 27.9 bits (59), Expect = 8.0
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = -3
Query: 643 RNGIGMSDLIKLSSGLTTPSSITKSRRT 560
R +GMSD I SSG ++P SI + R++
Sbjct: 554 RMSLGMSDQIPNSSGSSSPPSIQRRRQS 581
>SB_30637| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1137
Score = 27.9 bits (59), Expect = 8.0
Identities = 18/72 (25%), Positives = 32/72 (44%)
Frame = +3
Query: 42 KNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDKNLATTDLDELV 221
K + DE+ R++ E E ++ + EE+ +K DEEE ++ D+
Sbjct: 1038 KKMKDEQDEIERKKAE-EEEKKRKEEEESKKKDEKEKEEEDEDEEEEEEKKEDAKTDDSE 1096
Query: 222 MNAANAENPEAQ 257
A E+ EA+
Sbjct: 1097 TKEAEPESKEAE 1108
>SB_24364| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 648
Score = 27.9 bits (59), Expect = 8.0
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +3
Query: 42 KNAGKDVDEMRRRRNEVTVELRKNKREETLQKRR 143
K+ +D DE++R+R V +R+ +R+ QKRR
Sbjct: 205 KDEKEDEDELKRKR--TGVRIRRRRRQRRKQKRR 236
>SB_11650| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 336
Score = 27.9 bits (59), Expect = 8.0
Identities = 29/118 (24%), Positives = 50/118 (42%), Gaps = 1/118 (0%)
Frame = +3
Query: 15 SSEKRMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDKNL 194
S ++ +++ N G+D R R + KNK + + I++S D+ D+
Sbjct: 84 SGKEHLNMATN-GRDRTGDRYHRTRSAINDSKNKIQPNNTSTNSTRITWSMDDPATDEVF 142
Query: 195 ATTDLDELVMNAANAENPEAQLA-AVQQCRKLLSCDKNPPIDELIAAGILPILVQCLS 365
D+DEL +A + L + C LL D+N I +A + P + C S
Sbjct: 143 RELDVDELRWPEEDARDSSQDLKNKTKVCSPLL--DENLGILPGVAP-LSPSMAACNS 197
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,932,823
Number of Sequences: 59808
Number of extensions: 479668
Number of successful extensions: 1624
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1310
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1539
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1757375282
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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