SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0435
         (681 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41992-1|AAA83354.2|  514|Caenorhabditis elegans Importin alpha ...   253   1e-67
AF040995-1|AAB97171.1|  514|Caenorhabditis elegans importin alph...   253   1e-67
AF005266-1|AAQ13407.1|  423|Caenorhabditis elegans importin alph...   200   6e-52
U80444-4|AAB37790.1|  531|Caenorhabditis elegans Importin alpha ...   141   4e-34
AF326936-1|AAG49386.1|  531|Caenorhabditis elegans importin beta...   141   4e-34
AF040996-1|AAB97172.1|  531|Caenorhabditis elegans importin alph...   141   4e-34
Z74043-9|CAA98540.1|  524|Caenorhabditis elegans Hypothetical pr...    50   1e-06
AF040997-1|AAB97173.1|  524|Caenorhabditis elegans importin alph...    50   1e-06
AF024493-2|AAB70323.1|  322|Caenorhabditis elegans Hypothetical ...    39   0.003
Z73908-4|CAA98127.2|  447|Caenorhabditis elegans Hypothetical pr...    37   0.015
AL110479-24|CAJ76966.1| 1084|Caenorhabditis elegans Hypothetical...    37   0.015
AL110479-23|CAB60320.2| 1254|Caenorhabditis elegans Hypothetical...    37   0.015
AF003136-1|AAK21379.3|  896|Caenorhabditis elegans Importin beta...    33   0.14 
Z83120-3|CAB05587.1|  419|Caenorhabditis elegans Hypothetical pr...    33   0.19 
Z83120-2|CAB05586.1|  883|Caenorhabditis elegans Hypothetical pr...    33   0.19 
AC024744-4|AAK72071.3| 1192|Caenorhabditis elegans Hypothetical ...    31   0.58 
AC024824-1|AAK85503.1|  679|Caenorhabditis elegans Hypothetical ...    31   0.76 
AF067608-11|AAC17656.2|  368|Caenorhabditis elegans Hypothetical...    31   1.0  
U64600-3|AAK39204.1|  656|Caenorhabditis elegans Temporarily ass...    29   3.1  
AF003389-4|AAN63407.1|  598|Caenorhabditis elegans Hypothetical ...    29   3.1  
AF003389-3|AAC71136.1| 1003|Caenorhabditis elegans Hypothetical ...    29   3.1  
AC006621-3|AAK68263.1|  368|Caenorhabditis elegans Hypothetical ...    29   3.1  
Z79755-7|CAB02103.1|  466|Caenorhabditis elegans Hypothetical pr...    29   4.1  
U68185-1|AAC47444.1| 1042|Caenorhabditis elegans ADM-1 prepropro...    29   4.1  
AL032626-12|CAA21545.1| 1042|Caenorhabditis elegans Hypothetical...    29   4.1  
L23645-8|AAK26133.1|  282|Caenorhabditis elegans Peroxisome asse...    28   5.4  
AL033509-1|CAA22059.1| 1494|Caenorhabditis elegans Hypothetical ...    28   5.4  
Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical pr...    28   7.1  
Z75547-11|CAA99905.4|  394|Caenorhabditis elegans Hypothetical p...    28   7.1  
AF047661-2|AAK71389.1|  886|Caenorhabditis elegans Hypothetical ...    27   9.4  
AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical ...    27   9.4  
AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical ...    27   9.4  
AC024761-2|AAF59463.1|  174|Caenorhabditis elegans Hypothetical ...    27   9.4  

>U41992-1|AAA83354.2|  514|Caenorhabditis elegans Importin alpha
           family protein 3 protein.
          Length = 514

 Score =  253 bits (619), Expect = 1e-67
 Identities = 128/223 (57%), Positives = 156/223 (69%), Gaps = 2/223 (0%)
 Frame = +3

Query: 18  SEKRMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDKNLA 197
           S  R   +KN  K+    + +RNE  V +RK+KREE + KRRN+      D E       
Sbjct: 2   SSNRQAYYKNNAKE-QIGKEKRNEEVVSIRKDKREEAISKRRNINTQIEDDSETSTTPPG 60

Query: 198 TTDLD--ELVMNAANAENPEAQLAAVQQCRKLLSCDKNPPIDELIAAGILPILVQCLSRA 371
             D +   L + AA + +P  QL AVQQ RK+LS D+NPPID+LI +GILP+LVQCLS  
Sbjct: 61  PFDANLLRLTVAAAQSSDPAEQLTAVQQARKMLSTDRNPPIDDLIGSGILPVLVQCLSST 120

Query: 372 DNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHENVCDQAVWALGNIIG 551
           D P LQFE AWALTNIASGTS QT  VV+AGAVP+FLQLL   + NVC+Q+VWALGNIIG
Sbjct: 121 D-PNLQFEAAWALTNIASGTSEQTQAVVNAGAVPLFLQLLSCGNLNVCEQSVWALGNIIG 179

Query: 552 DGPVLRDFVIELGVVKPLLSLIKSDIPIPFLRNVTWVIVNLCR 680
           DGP  RD+ +ELG+++PLL  I  +IPI FLRNVTWVIVNLCR
Sbjct: 180 DGPHFRDYCLELGILQPLLQFINPEIPIGFLRNVTWVIVNLCR 222



 Score = 45.6 bits (103), Expect = 3e-05
 Identities = 34/125 (27%), Positives = 55/125 (44%), Gaps = 1/125 (0%)
 Frame = +3

Query: 303 NPPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFL 482
           N  I  +I A ++  LV  L   D   +Q     A+ NI +GT  QT  V+ +G +    
Sbjct: 267 NEHIQMVIEAQVVTHLVPLLGHVD-VKVQTAALRAVGNIVTGTDEQTQLVLDSGVLRFMP 325

Query: 483 QLLMSPHENVCDQAVWALGNIIGDGPVLRDFVIELGVVKPLLSLI-KSDIPIPFLRNVTW 659
            LL    E +  +AVW + NI          V + G++  ++ L+ + D P    +   W
Sbjct: 326 GLLAHYKEKINKEAVWFVSNITAGNQQQVQDVFDAGIMPMIIHLLDRGDFPTQ--KEAAW 383

Query: 660 VIVNL 674
            I N+
Sbjct: 384 AISNV 388



 Score = 31.5 bits (68), Expect = 0.58
 Identities = 24/101 (23%), Positives = 37/101 (36%)
 Frame = +3

Query: 315 DELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLM 494
           D  +  GIL  L+Q ++            W + N+        +  V    +P    L+ 
Sbjct: 186 DYCLELGILQPLLQFINPEIPIGFLRNVTWVIVNLCRCKDPAPSPAVVRTILPALSLLIH 245

Query: 495 SPHENVCDQAVWALGNIIGDGPVLRDFVIELGVVKPLLSLI 617
               N+    VWAL  +   G      VIE  VV  L+ L+
Sbjct: 246 HQDTNILIDTVWALSYLTDGGNEHIQMVIEAQVVTHLVPLL 286


>AF040995-1|AAB97171.1|  514|Caenorhabditis elegans importin alpha 3
           protein.
          Length = 514

 Score =  253 bits (619), Expect = 1e-67
 Identities = 128/223 (57%), Positives = 156/223 (69%), Gaps = 2/223 (0%)
 Frame = +3

Query: 18  SEKRMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDKNLA 197
           S  R   +KN  K+    + +RNE  V +RK+KREE + KRRN+      D E       
Sbjct: 2   SSNRQAYYKNNAKE-QIGKEKRNEEVVSIRKDKREEAISKRRNINTQIEDDSETSTTPPG 60

Query: 198 TTDLD--ELVMNAANAENPEAQLAAVQQCRKLLSCDKNPPIDELIAAGILPILVQCLSRA 371
             D +   L + AA + +P  QL AVQQ RK+LS D+NPPID+LI +GILP+LVQCLS  
Sbjct: 61  PFDANLLRLTVAAAQSSDPAEQLTAVQQARKMLSTDRNPPIDDLIGSGILPVLVQCLSST 120

Query: 372 DNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHENVCDQAVWALGNIIG 551
           D P LQFE AWALTNIASGTS QT  VV+AGAVP+FLQLL   + NVC+Q+VWALGNIIG
Sbjct: 121 D-PNLQFEAAWALTNIASGTSEQTQAVVNAGAVPLFLQLLSCGNLNVCEQSVWALGNIIG 179

Query: 552 DGPVLRDFVIELGVVKPLLSLIKSDIPIPFLRNVTWVIVNLCR 680
           DGP  RD+ +ELG+++PLL  I  +IPI FLRNVTWVIVNLCR
Sbjct: 180 DGPHFRDYCLELGILQPLLQFINPEIPIGFLRNVTWVIVNLCR 222



 Score = 45.6 bits (103), Expect = 3e-05
 Identities = 34/125 (27%), Positives = 55/125 (44%), Gaps = 1/125 (0%)
 Frame = +3

Query: 303 NPPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFL 482
           N  I  +I A ++  LV  L   D   +Q     A+ NI +GT  QT  V+ +G +    
Sbjct: 267 NEHIQMVIEAQVVTHLVPLLGHVD-VKVQTAALRAVGNIVTGTDEQTQLVLDSGVLRFMP 325

Query: 483 QLLMSPHENVCDQAVWALGNIIGDGPVLRDFVIELGVVKPLLSLI-KSDIPIPFLRNVTW 659
            LL    E +  +AVW + NI          V + G++  ++ L+ + D P    +   W
Sbjct: 326 GLLAHYKEKINKEAVWFVSNITAGNQQQVQDVFDAGIMPMIIHLLDRGDFPTQ--KEAAW 383

Query: 660 VIVNL 674
            I N+
Sbjct: 384 AISNV 388



 Score = 31.5 bits (68), Expect = 0.58
 Identities = 24/101 (23%), Positives = 37/101 (36%)
 Frame = +3

Query: 315 DELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLM 494
           D  +  GIL  L+Q ++            W + N+        +  V    +P    L+ 
Sbjct: 186 DYCLELGILQPLLQFINPEIPIGFLRNVTWVIVNLCRCKDPAPSPAVVRTILPALSLLIH 245

Query: 495 SPHENVCDQAVWALGNIIGDGPVLRDFVIELGVVKPLLSLI 617
               N+    VWAL  +   G      VIE  VV  L+ L+
Sbjct: 246 HQDTNILIDTVWALSYLTDGGNEHIQMVIEAQVVTHLVPLL 286


>AF005266-1|AAQ13407.1|  423|Caenorhabditis elegans importin alpha-3
           subunit protein.
          Length = 423

 Score =  200 bits (489), Expect = 6e-52
 Identities = 94/132 (71%), Positives = 110/132 (83%)
 Frame = +3

Query: 285 LLSCDKNPPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAG 464
           +LS D+NPPID+LI +GILP+LVQCLS  D P LQFE AWALTNIASGTS QT  VV+AG
Sbjct: 1   MLSTDRNPPIDDLIGSGILPVLVQCLSSTD-PNLQFEAAWALTNIASGTSEQTQAVVNAG 59

Query: 465 AVPVFLQLLMSPHENVCDQAVWALGNIIGDGPVLRDFVIELGVVKPLLSLIKSDIPIPFL 644
           AVP+FLQLL   + NVC+Q+VWALGNIIGDGP  RD+ +ELG+++PLL  I  +IPI FL
Sbjct: 60  AVPLFLQLLSCGNLNVCEQSVWALGNIIGDGPHFRDYCLELGILQPLLQFINPEIPIGFL 119

Query: 645 RNVTWVIVNLCR 680
           RNVTWVIVNLCR
Sbjct: 120 RNVTWVIVNLCR 131



 Score = 45.6 bits (103), Expect = 3e-05
 Identities = 34/125 (27%), Positives = 55/125 (44%), Gaps = 1/125 (0%)
 Frame = +3

Query: 303 NPPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFL 482
           N  I  +I A ++  LV  L   D   +Q     A+ NI +GT  QT  V+ +G +    
Sbjct: 176 NEHIQMVIEAQVVTHLVPLLGHVD-VKVQTAALRAVGNIVTGTDEQTQLVLDSGVLRFMP 234

Query: 483 QLLMSPHENVCDQAVWALGNIIGDGPVLRDFVIELGVVKPLLSLI-KSDIPIPFLRNVTW 659
            LL    E +  +AVW + NI          V + G++  ++ L+ + D P    +   W
Sbjct: 235 GLLAHYKEKINKEAVWFVSNITAGNQQQVQDVFDAGIMPMIIHLLDRGDFPTQ--KEAAW 292

Query: 660 VIVNL 674
            I N+
Sbjct: 293 AISNV 297



 Score = 31.5 bits (68), Expect = 0.58
 Identities = 24/101 (23%), Positives = 37/101 (36%)
 Frame = +3

Query: 315 DELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLM 494
           D  +  GIL  L+Q ++            W + N+        +  V    +P    L+ 
Sbjct: 95  DYCLELGILQPLLQFINPEIPIGFLRNVTWVIVNLCRCKDPAPSPAVVRTILPALSLLIH 154

Query: 495 SPHENVCDQAVWALGNIIGDGPVLRDFVIELGVVKPLLSLI 617
               N+    VWAL  +   G      VIE  VV  L+ L+
Sbjct: 155 HQDTNILIDTVWALSYLTDGGNEHIQMVIEAQVVTHLVPLL 195


>U80444-4|AAB37790.1|  531|Caenorhabditis elegans Importin alpha
           family protein 2 protein.
          Length = 531

 Score =  141 bits (342), Expect = 4e-34
 Identities = 85/230 (36%), Positives = 126/230 (54%), Gaps = 12/230 (5%)
 Frame = +3

Query: 27  RMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNV--------PISYSTDEEEI 182
           R+  +KN  K  +E+RRRR E +VE+RK K  + + KRRN+          S   + E+I
Sbjct: 21  RLQQYKNLTKH-EELRRRRTECSVEIRKQKGADMMMKRRNIVDVDEGGNSESELEEPEKI 79

Query: 183 DKNLATTDLDELVMNAANAENP--EAQLAAVQQCRKLLSCDKNPPIDELIAAGILPILVQ 356
               ++T L    + A  + NP  +  +   +  RK LS  KNPPIDE+I  G+L  LVQ
Sbjct: 80  SHQQSSTRLSNDEIRAILSNNPSEDDMVRCFESLRKSLSKTKNPPIDEVIHCGLLQALVQ 139

Query: 357 CLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHENVCDQAVWAL 536
            LS  +N  +Q+E AWALTNI SG++ QT   V AG     + L +     + +QA+WA+
Sbjct: 140 ALS-VENERVQYEAAWALTNIVSGSTEQTIAAVEAGVTIPLIHLSVHQSAQISEQALWAV 198

Query: 537 GNIIGDGPVLRDFVIELGVVKPLLSLIK--SDIPIPFLRNVTWVIVNLCR 680
            NI GD   LRD+VI+   V+ L+ L++    +    +R + W   N+CR
Sbjct: 199 ANIAGDSSQLRDYVIKCHGVEALMHLMEKVDQLGDSHVRTIAWAFSNMCR 248



 Score = 44.8 bits (101), Expect = 6e-05
 Identities = 34/137 (24%), Positives = 62/137 (45%), Gaps = 2/137 (1%)
 Frame = +3

Query: 153 ISYSTD--EEEIDKNLATTDLDELVMNAANAENPEAQLAAVQQCRKLLSCDKNPPIDELI 326
           +SY TD  +E+I+    +  L  +V     AEN    +A   +    ++   +     +I
Sbjct: 285 VSYLTDGPDEQIELARESGVLPHVVAFFKEAEN---LVAPALRTLGNVATGNDSLTQAVI 341

Query: 327 AAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHE 506
             G L  ++  + +  + ++  E  W ++NI +GT  Q   V+ A  +PV + +L S   
Sbjct: 342 DLGSLDEILPLMEKTRSSSIVKECCWLVSNIIAGTQKQIQAVLDANLLPVLINVLKSGDH 401

Query: 507 NVCDQAVWALGNIIGDG 557
               +A WAL N+   G
Sbjct: 402 KCQFEASWALSNLAQGG 418



 Score = 41.1 bits (92), Expect = 7e-04
 Identities = 28/125 (22%), Positives = 52/125 (41%)
 Frame = +3

Query: 300 KNPPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVF 479
           KNP     +   +   LV+ +   D    Q +  WA++ +  G   Q      +G +P  
Sbjct: 250 KNPHAPLEVLRVLSKGLVKLVQHTDRQVRQ-DACWAVSYLTDGPDEQIELARESGVLPHV 308

Query: 480 LQLLMSPHENVCDQAVWALGNIIGDGPVLRDFVIELGVVKPLLSLIKSDIPIPFLRNVTW 659
           +       EN+   A+  LGN+      L   VI+LG +  +L L++       ++   W
Sbjct: 309 VAFFKEA-ENLVAPALRTLGNVATGNDSLTQAVIDLGSLDEILPLMEKTRSSSIVKECCW 367

Query: 660 VIVNL 674
           ++ N+
Sbjct: 368 LVSNI 372


>AF326936-1|AAG49386.1|  531|Caenorhabditis elegans importin beta
           binding domain proteinprotein.
          Length = 531

 Score =  141 bits (342), Expect = 4e-34
 Identities = 85/230 (36%), Positives = 126/230 (54%), Gaps = 12/230 (5%)
 Frame = +3

Query: 27  RMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNV--------PISYSTDEEEI 182
           R+  +KN  K  +E+RRRR E +VE+RK K  + + KRRN+          S   + E+I
Sbjct: 21  RLQQYKNLTKH-EELRRRRTECSVEIRKQKGADMMMKRRNIVDVDEGGNSESELEEPEKI 79

Query: 183 DKNLATTDLDELVMNAANAENP--EAQLAAVQQCRKLLSCDKNPPIDELIAAGILPILVQ 356
               ++T L    + A  + NP  +  +   +  RK LS  KNPPIDE+I  G+L  LVQ
Sbjct: 80  SHQQSSTRLSNDEIRAILSNNPSEDDMVRCFESLRKSLSKTKNPPIDEVIHCGLLQALVQ 139

Query: 357 CLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHENVCDQAVWAL 536
            LS  +N  +Q+E AWALTNI SG++ QT   V AG     + L +     + +QA+WA+
Sbjct: 140 ALS-VENERVQYEAAWALTNIVSGSTEQTIAAVEAGVTIPLIHLSVHQSAQISEQALWAV 198

Query: 537 GNIIGDGPVLRDFVIELGVVKPLLSLIK--SDIPIPFLRNVTWVIVNLCR 680
            NI GD   LRD+VI+   V+ L+ L++    +    +R + W   N+CR
Sbjct: 199 ANIAGDSSQLRDYVIKCHGVEALMHLMEKVDQLGDSHVRTIAWAFSNMCR 248



 Score = 44.8 bits (101), Expect = 6e-05
 Identities = 34/137 (24%), Positives = 62/137 (45%), Gaps = 2/137 (1%)
 Frame = +3

Query: 153 ISYSTD--EEEIDKNLATTDLDELVMNAANAENPEAQLAAVQQCRKLLSCDKNPPIDELI 326
           +SY TD  +E+I+    +  L  +V     AEN    +A   +    ++   +     +I
Sbjct: 285 VSYLTDGPDEQIELARESGVLPHVVAFFKEAEN---LVAPALRTLGNVATGNDSLTQAVI 341

Query: 327 AAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHE 506
             G L  ++  + +  + ++  E  W ++NI +GT  Q   V+ A  +PV + +L S   
Sbjct: 342 DLGSLDEILPLMEKTRSSSIVKECCWLVSNIIAGTQKQIQAVLDANLLPVLINVLKSGDH 401

Query: 507 NVCDQAVWALGNIIGDG 557
               +A WAL N+   G
Sbjct: 402 KCQFEASWALSNLAQGG 418



 Score = 41.1 bits (92), Expect = 7e-04
 Identities = 28/125 (22%), Positives = 52/125 (41%)
 Frame = +3

Query: 300 KNPPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVF 479
           KNP     +   +   LV+ +   D    Q +  WA++ +  G   Q      +G +P  
Sbjct: 250 KNPHAPLEVLRVLSKGLVKLVQHTDRQVRQ-DACWAVSYLTDGPDEQIELARESGVLPHV 308

Query: 480 LQLLMSPHENVCDQAVWALGNIIGDGPVLRDFVIELGVVKPLLSLIKSDIPIPFLRNVTW 659
           +       EN+   A+  LGN+      L   VI+LG +  +L L++       ++   W
Sbjct: 309 VAFFKEA-ENLVAPALRTLGNVATGNDSLTQAVIDLGSLDEILPLMEKTRSSSIVKECCW 367

Query: 660 VIVNL 674
           ++ N+
Sbjct: 368 LVSNI 372


>AF040996-1|AAB97172.1|  531|Caenorhabditis elegans importin alpha 2
           protein.
          Length = 531

 Score =  141 bits (342), Expect = 4e-34
 Identities = 85/230 (36%), Positives = 126/230 (54%), Gaps = 12/230 (5%)
 Frame = +3

Query: 27  RMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNV--------PISYSTDEEEI 182
           R+  +KN  K  +E+RRRR E +VE+RK K  + + KRRN+          S   + E+I
Sbjct: 21  RLQQYKNLTKH-EELRRRRTECSVEIRKQKGADMMMKRRNIVDVDEGGNSESELEEPEKI 79

Query: 183 DKNLATTDLDELVMNAANAENP--EAQLAAVQQCRKLLSCDKNPPIDELIAAGILPILVQ 356
               ++T L    + A  + NP  +  +   +  RK LS  KNPPIDE+I  G+L  LVQ
Sbjct: 80  SHQQSSTRLSNDEIRAILSNNPSEDDMVRCFESLRKSLSKTKNPPIDEVIHCGLLQALVQ 139

Query: 357 CLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHENVCDQAVWAL 536
            LS  +N  +Q+E AWALTNI SG++ QT   V AG     + L +     + +QA+WA+
Sbjct: 140 ALS-VENERVQYEAAWALTNIVSGSTEQTIAAVEAGVTIPLIHLSVHQSAQISEQALWAV 198

Query: 537 GNIIGDGPVLRDFVIELGVVKPLLSLIK--SDIPIPFLRNVTWVIVNLCR 680
            NI GD   LRD+VI+   V+ L+ L++    +    +R + W   N+CR
Sbjct: 199 ANIAGDSSQLRDYVIKCHGVEALMHLMEKVDQLGDSHVRTIAWAFSNMCR 248



 Score = 44.8 bits (101), Expect = 6e-05
 Identities = 34/137 (24%), Positives = 62/137 (45%), Gaps = 2/137 (1%)
 Frame = +3

Query: 153 ISYSTD--EEEIDKNLATTDLDELVMNAANAENPEAQLAAVQQCRKLLSCDKNPPIDELI 326
           +SY TD  +E+I+    +  L  +V     AEN    +A   +    ++   +     +I
Sbjct: 285 VSYLTDGPDEQIELARESGVLPHVVAFFKEAEN---LVAPALRTLGNVATGNDSLTQAVI 341

Query: 327 AAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHE 506
             G L  ++  + +  + ++  E  W ++NI +GT  Q   V+ A  +PV + +L S   
Sbjct: 342 DLGSLDEILPLMEKTRSSSIVKECCWLVSNIIAGTQKQIQAVLDANLLPVLINVLKSGDH 401

Query: 507 NVCDQAVWALGNIIGDG 557
               +A WAL N+   G
Sbjct: 402 KCQFEASWALSNLAQGG 418



 Score = 41.1 bits (92), Expect = 7e-04
 Identities = 28/125 (22%), Positives = 52/125 (41%)
 Frame = +3

Query: 300 KNPPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVF 479
           KNP     +   +   LV+ +   D    Q +  WA++ +  G   Q      +G +P  
Sbjct: 250 KNPHAPLEVLRVLSKGLVKLVQHTDRQVRQ-DACWAVSYLTDGPDEQIELARESGVLPHV 308

Query: 480 LQLLMSPHENVCDQAVWALGNIIGDGPVLRDFVIELGVVKPLLSLIKSDIPIPFLRNVTW 659
           +       EN+   A+  LGN+      L   VI+LG +  +L L++       ++   W
Sbjct: 309 VAFFKEA-ENLVAPALRTLGNVATGNDSLTQAVIDLGSLDEILPLMEKTRSSSIVKECCW 367

Query: 660 VIVNL 674
           ++ N+
Sbjct: 368 LVSNI 372


>Z74043-9|CAA98540.1|  524|Caenorhabditis elegans Hypothetical
           protein T19B10.7 protein.
          Length = 524

 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 22/60 (36%), Positives = 38/60 (63%)
 Frame = +3

Query: 15  SSEKRMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDKNL 194
           S E+R  ++K+  +D +EMRR+R E  V++RKN+R+E  ++ R + +  S   EE  + L
Sbjct: 8   SHEERSKMYKSNVRDQNEMRRKRREDEVQIRKNRRDEKFERNRQITVQRSLSHEETSELL 67


>AF040997-1|AAB97173.1|  524|Caenorhabditis elegans importin alpha 1
           protein.
          Length = 524

 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 22/60 (36%), Positives = 38/60 (63%)
 Frame = +3

Query: 15  SSEKRMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDKNL 194
           S E+R  ++K+  +D +EMRR+R E  V++RKN+R+E  ++ R + +  S   EE  + L
Sbjct: 8   SHEERSKMYKSNVRDQNEMRRKRREDEVQIRKNRRDEKFERNRQITVQRSLSHEETSELL 67


>AF024493-2|AAB70323.1|  322|Caenorhabditis elegans Hypothetical
           protein F23F1.5 protein.
          Length = 322

 Score = 39.1 bits (87), Expect = 0.003
 Identities = 20/63 (31%), Positives = 35/63 (55%)
 Frame = +3

Query: 27  RMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDKNLATTD 206
           R   +KN  K  ++  +RR E T+E +KN R +T  K RN+     T +E+ ++ + TT 
Sbjct: 28  RYSQYKNLTKAAEQQAKRREE-TLERQKNGRFDTFMKLRNLAFDDVTSDEDDEQKIETTT 86

Query: 207 LDE 215
            ++
Sbjct: 87  AEK 89


>Z73908-4|CAA98127.2|  447|Caenorhabditis elegans Hypothetical
           protein F53B2.5 protein.
          Length = 447

 Score = 36.7 bits (81), Expect = 0.015
 Identities = 14/56 (25%), Positives = 29/56 (51%)
 Frame = +3

Query: 387 QFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHENVCDQAVWALGNIIGD 554
           +    W +TN+   +   T+  V++  + + ++L+ S +  +  Q VWA+ NI  D
Sbjct: 58  EVNAVWIITNMCCISQEVTHLFVNSNCLDILIKLVRSQNARLSSQTVWAIANIAAD 113



 Score = 33.5 bits (73), Expect = 0.14
 Identities = 26/100 (26%), Positives = 46/100 (46%), Gaps = 9/100 (9%)
 Frame = +3

Query: 324 IAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPH 503
           + +  L IL++ L R+ N  L  +T WA+ NIA+  S+   K      + +  + L + +
Sbjct: 80  VNSNCLDILIK-LVRSQNARLSSQTVWAIANIAADCSSCKLKCRSPKLLKILARNLQTSY 138

Query: 504 E-NVCD--QAVWALGNIIGDG------PVLRDFVIELGVV 596
           + +  D  Q +W + NI   G      PV R  +  L  +
Sbjct: 139 KLDDADRRQLIWCVNNIFSGGRTTMPSPVARSLICALSAI 178



 Score = 31.9 bits (69), Expect = 0.44
 Identities = 16/57 (28%), Positives = 29/57 (50%)
 Frame = +3

Query: 414 NIASGTSAQTNKVVHAGAVPVFLQLLMSPHENVCDQAVWALGNIIGDGPVLRDFVIE 584
           NIA G   QT+ +V      V + + MS  E+   +A W + N++   P   D++++
Sbjct: 246 NIAVGNDVQTDLLVDNPKFRVVMNIAMSSPEHH-SEAAWIISNVVAGAPRHVDYIMD 301


>AL110479-24|CAJ76966.1| 1084|Caenorhabditis elegans Hypothetical
           protein Y105C5B.21b protein.
          Length = 1084

 Score = 36.7 bits (81), Expect = 0.015
 Identities = 41/149 (27%), Positives = 72/149 (48%), Gaps = 9/149 (6%)
 Frame = +3

Query: 207 LDELVMNAANAENPEAQLAAVQQCRKLLSCDKNPPIDELIAAGILPILVQCLSRADNPAL 386
           L E++   ++A+  + QL A    + L   D N   +E    G +P L+  L R+D P +
Sbjct: 523 LKEVIEYLSSADK-DKQLNASGYLQHLTYTD-NQIKEETREYGGIPKLIALL-RSDTPRI 579

Query: 387 QFETAWALTNIASGTSAQTNK--VVHAGAVPVFLQLLMSPHE-NVCDQAVWALGNIIGDG 557
           Q      L N++ G     NK  V+ A  V +  ++L + H+ +V ++A  AL N+    
Sbjct: 580 QKNACACLKNLSFGKENDANKLAVMEADGVRLIAEVLRTTHDASVKEEAAAALWNLSSAD 639

Query: 558 ---PVLRDFVIEL---GVVKPLLSLIKSD 626
              PV+ +   E+    V+ P+L++  SD
Sbjct: 640 MLKPVILESATEILSQQVIAPVLAVGTSD 668


>AL110479-23|CAB60320.2| 1254|Caenorhabditis elegans Hypothetical
            protein Y105C5B.21a protein.
          Length = 1254

 Score = 36.7 bits (81), Expect = 0.015
 Identities = 41/149 (27%), Positives = 72/149 (48%), Gaps = 9/149 (6%)
 Frame = +3

Query: 207  LDELVMNAANAENPEAQLAAVQQCRKLLSCDKNPPIDELIAAGILPILVQCLSRADNPAL 386
            L E++   ++A+  + QL A    + L   D N   +E    G +P L+  L R+D P +
Sbjct: 693  LKEVIEYLSSADK-DKQLNASGYLQHLTYTD-NQIKEETREYGGIPKLIALL-RSDTPRI 749

Query: 387  QFETAWALTNIASGTSAQTNK--VVHAGAVPVFLQLLMSPHE-NVCDQAVWALGNIIGDG 557
            Q      L N++ G     NK  V+ A  V +  ++L + H+ +V ++A  AL N+    
Sbjct: 750  QKNACACLKNLSFGKENDANKLAVMEADGVRLIAEVLRTTHDASVKEEAAAALWNLSSAD 809

Query: 558  ---PVLRDFVIEL---GVVKPLLSLIKSD 626
               PV+ +   E+    V+ P+L++  SD
Sbjct: 810  MLKPVILESATEILSQQVIAPVLAVGTSD 838


>AF003136-1|AAK21379.3|  896|Caenorhabditis elegans Importin beta
           family protein 1 protein.
          Length = 896

 Score = 33.5 bits (73), Expect = 0.14
 Identities = 28/104 (26%), Positives = 45/104 (43%), Gaps = 2/104 (1%)
 Frame = +3

Query: 375 NPALQFETA--WALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHENVCDQAVWALGNII 548
           NP  +++ A   A  +I  G   +    +   A+P  +  +   + NV D A W+LG +I
Sbjct: 383 NPDWKYKEAAIMAFGSILDGPDPKKLLPMAQEALPAIVAAMCDKNVNVRDTAAWSLGRVI 442

Query: 549 GDGPVLRDFVIELGVVKPLLSLIKSDIPIPFLRNVTWVIVNLCR 680
                L +    L  V P+LS      P     NV W +V+L +
Sbjct: 443 DTCSELANNAELLQSVLPVLSNGLHQEP-RVANNVCWALVSLVK 485


>Z83120-3|CAB05587.1|  419|Caenorhabditis elegans Hypothetical
           protein R06A4.4b protein.
          Length = 419

 Score = 33.1 bits (72), Expect = 0.19
 Identities = 17/51 (33%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
 Frame = +3

Query: 477 FLQLLMSPHE-NVCDQAVWALGNI-IGDGPVLRDFVIELGVVKPLLSLIKS 623
           FL   + P + +VC+ A+WALG + +  GP ++ F+    +++PL+ +I S
Sbjct: 240 FLAQNLDPSKISVCNNAIWALGELALKMGPAMKQFIGP--IIEPLIVVINS 288


>Z83120-2|CAB05586.1|  883|Caenorhabditis elegans Hypothetical
           protein R06A4.4a protein.
          Length = 883

 Score = 33.1 bits (72), Expect = 0.19
 Identities = 17/51 (33%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
 Frame = +3

Query: 477 FLQLLMSPHE-NVCDQAVWALGNI-IGDGPVLRDFVIELGVVKPLLSLIKS 623
           FL   + P + +VC+ A+WALG + +  GP ++ F+    +++PL+ +I S
Sbjct: 704 FLAQNLDPSKISVCNNAIWALGELALKMGPAMKQFIGP--IIEPLIVVINS 752


>AC024744-4|AAK72071.3| 1192|Caenorhabditis elegans Hypothetical
           protein Y108G3AL.7 protein.
          Length = 1192

 Score = 31.5 bits (68), Expect = 0.58
 Identities = 15/44 (34%), Positives = 28/44 (63%)
 Frame = +3

Query: 108 KNKREETLQKRRNVPISYSTDEEEIDKNLATTDLDELVMNAANA 239
           + +R  + +KR++   S  T +EE  ++LATTD +  V+N A++
Sbjct: 260 ERERARSRRKRKDEASSAVTSDEEDQEDLATTDSENPVINGASS 303


>AC024824-1|AAK85503.1|  679|Caenorhabditis elegans Hypothetical
           protein Y55B1BR.3 protein.
          Length = 679

 Score = 31.1 bits (67), Expect = 0.76
 Identities = 18/80 (22%), Positives = 43/80 (53%)
 Frame = +3

Query: 45  NAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDKNLATTDLDELVM 224
           ++  D  EM RRR +     +  K +++ +++R V  S S DE+E +K    +   +  +
Sbjct: 246 DSSDDDSEMERRRKKSKKSKKSKKFKKSEKRKRAVNDSSSDDEDEEEKPEKRSKKSKKAV 305

Query: 225 NAANAENPEAQLAAVQQCRK 284
             +++E+ E + ++ ++ +K
Sbjct: 306 IDSSSEDEEEEKSSKKRSKK 325


>AF067608-11|AAC17656.2|  368|Caenorhabditis elegans Hypothetical
           protein B0511.11 protein.
          Length = 368

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
 Frame = +3

Query: 114 KREETLQKRRNVPIS--YSTDEEEIDKNLATTDLDE 215
           K+E+   KR NVP++  YS     + KN +TT L E
Sbjct: 98  KKEDDKSKRENVPLTVVYSNPSISVSKNFSTTPLAE 133


>U64600-3|AAK39204.1|  656|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 312 protein.
          Length = 656

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 2/98 (2%)
 Frame = +3

Query: 54  KDVDEMRRRRNEVTVELRKN-KREETLQKRRNVPISYSTDEEEIDKNLATTDLDELVMNA 230
           K+ +EMR+R ++   E+R N +R + ++K           ++E+   L   + +   +  
Sbjct: 222 KEKEEMRQRMSDEMSEMRNNIERLQKMEKALERENERLNHQKELSDKLKVVNEENNDLRQ 281

Query: 231 ANAENPEAQLAAVQQCRKLLSCDKNPPIDELIA-AGIL 341
             AEN   +LA ++     + C+ +   DEL A  GIL
Sbjct: 282 NLAEN-HLELAMIKSELAQVRCEFDQKQDELSARRGIL 318


>AF003389-4|AAN63407.1|  598|Caenorhabditis elegans Hypothetical
           protein F23H11.4b protein.
          Length = 598

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
 Frame = +3

Query: 96  VELRKNKREETLQKR-RNVPISYSTDEEEIDKNLATTDLDELVMNAANAENPEAQLAAVQ 272
           V L  +K+E+ L  R RN+ +S+  DE+  + +  T D+  + +    A +    L  V 
Sbjct: 341 VSLTSSKKEKRLHCRLRNMQLSFHDDEDSTEPSNGTFDIKGIYLFRHMASDTPYILIHVG 400

Query: 273 QCRKLLS-CDKNPP 311
           + R ++S   ++PP
Sbjct: 401 EKRNVISFIPEDPP 414


>AF003389-3|AAC71136.1| 1003|Caenorhabditis elegans Hypothetical
           protein F23H11.4a protein.
          Length = 1003

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
 Frame = +3

Query: 96  VELRKNKREETLQKR-RNVPISYSTDEEEIDKNLATTDLDELVMNAANAENPEAQLAAVQ 272
           V L  +K+E+ L  R RN+ +S+  DE+  + +  T D+  + +    A +    L  V 
Sbjct: 341 VSLTSSKKEKRLHCRLRNMQLSFHDDEDSTEPSNGTFDIKGIYLFRHMASDTPYILIHVG 400

Query: 273 QCRKLLS-CDKNPP 311
           + R ++S   ++PP
Sbjct: 401 EKRNVISFIPEDPP 414


>AC006621-3|AAK68263.1|  368|Caenorhabditis elegans Hypothetical
           protein C52A10.3 protein.
          Length = 368

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = -2

Query: 326 YELINRRVFITREQFSALLHS 264
           YEL+ R +F+T EQ S +L+S
Sbjct: 199 YELVGREIFLTSEQLSKVLNS 219


>Z79755-7|CAB02103.1|  466|Caenorhabditis elegans Hypothetical
           protein F43G9.10 protein.
          Length = 466

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
 Frame = +3

Query: 42  KNAGKDVDEMRRRRNEVTVE--LRKNKREETLQKRRNV--PISYSTDEEEIDKNLATTDL 209
           +   +D D  RRRR E + E   R+++R E   +RR V  P      E+E  +N   ++ 
Sbjct: 69  RETDRDDDRRRRRRRESSDEEDRRRHRRHEDYGRRRQVEKPEVLGKVEDESSENEQESEE 128

Query: 210 DE 215
           DE
Sbjct: 129 DE 130


>U68185-1|AAC47444.1| 1042|Caenorhabditis elegans ADM-1
           preproprotein protein.
          Length = 1042

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 20/79 (25%), Positives = 31/79 (39%), Gaps = 2/79 (2%)
 Frame = -3

Query: 439 CADVPEAMFVKAQAVSNCNAGLSALERH*TRMGSIPAAMSSSIGGFLSHESSFLHCCTAA 260
           C  +  A        +NC +G   +      M S+ +A +          S   HC T A
Sbjct: 626 CKSIASAAVGLTSDGTNCASGRVCVAGSCVEMSSVSSATACPTNNLALLCSGHGHCTTTA 685

Query: 259 NCA--SGFSALAAFITSSS 209
            C   +G+S +A  I S+S
Sbjct: 686 RCVCFNGWSGVACDIRSNS 704


>AL032626-12|CAA21545.1| 1042|Caenorhabditis elegans Hypothetical
           protein Y37D8A.13 protein.
          Length = 1042

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 20/79 (25%), Positives = 31/79 (39%), Gaps = 2/79 (2%)
 Frame = -3

Query: 439 CADVPEAMFVKAQAVSNCNAGLSALERH*TRMGSIPAAMSSSIGGFLSHESSFLHCCTAA 260
           C  +  A        +NC +G   +      M S+ +A +          S   HC T A
Sbjct: 626 CKSIASAAVGLTSDGTNCASGRVCVAGSCVEMSSVSSATACPTNNLALLCSGHGHCTTTA 685

Query: 259 NCA--SGFSALAAFITSSS 209
            C   +G+S +A  I S+S
Sbjct: 686 RCVCFNGWSGVACDIRSNS 704


>L23645-8|AAK26133.1|  282|Caenorhabditis elegans Peroxisome
           assembly factor protein19 protein.
          Length = 282

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 21/80 (26%), Positives = 31/80 (38%)
 Frame = +3

Query: 42  KNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDKNLATTDLDELV 221
           + A KD  +M  +   +  E  K    +  +     P+    D E +    A   L E  
Sbjct: 56  QKAAKDFQKMLEQMVTLQEEAMKKAGADPSEGEGEQPLD-PNDPEALAMMDALKQLMECS 114

Query: 222 MNAANAENPEAQLAAVQQCR 281
            N ANA NPE  +A +   R
Sbjct: 115 SNVANASNPEEFMAGLDMLR 134


>AL033509-1|CAA22059.1| 1494|Caenorhabditis elegans Hypothetical
            protein Y113G7C.1 protein.
          Length = 1494

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = +3

Query: 63   DEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDK 188
            DE R ++++   E R+ K EE  +K +        D+E+IDK
Sbjct: 1057 DEERAKKDKRDAEERRKKDEERAKKDKEDAKKAKEDQEKIDK 1098


>Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical
           protein F36F2.3a protein.
          Length = 1128

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
 Frame = +3

Query: 54  KDVDEMRR---RRNEVTVELRKNKREETLQKRRNVPISYSTDEEEID 185
           +D D+ RR   RR++V  + R+ KREE    ++    + S DE+EID
Sbjct: 585 RDRDDARRKDRRRDDVRKKERREKREEEDDDQKTKD-AESKDEDEID 630


>Z75547-11|CAA99905.4|  394|Caenorhabditis elegans Hypothetical
           protein R11D1.10a protein.
          Length = 394

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 22/88 (25%), Positives = 38/88 (43%), Gaps = 6/88 (6%)
 Frame = +3

Query: 54  KDVDEMRRRRNEVTVELRKNKREETLQKRR-----NVPISYSTDEEEIDKNLATTDLDEL 218
           KD DE+  RR ++  + ++  RE+    R      N   S +T EE  + N    D ++ 
Sbjct: 218 KDWDELEARRRKIFEDEKEKNREDDASIRESMVSANTEFSEATKEEMNEINNILQDAEQR 277

Query: 219 VMNAANAENPE-AQLAAVQQCRKLLSCD 299
           V      E  + A+L  + +  +  S D
Sbjct: 278 VAETKKQEEHDAAELRTLMKSTRQKSLD 305


>AF047661-2|AAK71389.1|  886|Caenorhabditis elegans Hypothetical
           protein M70.3b protein.
          Length = 886

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = +3

Query: 321 LIAAGILPILVQCLSRADNPALQFETA 401
           LI  GIL I V C+S   +P+ Q ETA
Sbjct: 6   LIIIGILLISVFCISSGSSPSKQSETA 32


>AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical
           protein R148.3a protein.
          Length = 1115

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
 Frame = +3

Query: 33  HVFKNAGKDVDEMRRRRNEVTVELRK-NKREETLQKRRNVPISYSTDEEEI 182
           H  KNA  D+ E +RR  E+  E ++ + R   + K  N  +  S + +++
Sbjct: 822 HKLKNAESDLQEAKRRAEEIGAEKKELSDRLNEMLKNLNQSMQKSAENDKM 872


>AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical
           protein R148.3b protein.
          Length = 1130

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
 Frame = +3

Query: 33  HVFKNAGKDVDEMRRRRNEVTVELRK-NKREETLQKRRNVPISYSTDEEEI 182
           H  KNA  D+ E +RR  E+  E ++ + R   + K  N  +  S + +++
Sbjct: 834 HKLKNAESDLQEAKRRAEEIGAEKKELSDRLNEMLKNLNQSMQKSAENDKM 884


>AC024761-2|AAF59463.1|  174|Caenorhabditis elegans Hypothetical
           protein Y38C1AA.9 protein.
          Length = 174

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 16/74 (21%), Positives = 32/74 (43%)
 Frame = +3

Query: 57  DVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDKNLATTDLDELVMNAAN 236
           +VD++  +     VE+   + EE   K+R V  +   +E + + + A   L E       
Sbjct: 29  EVDDVGNKTISGEVEISDVEAEEKTDKKREVDANDIQEEVKAELDKAVESLKETAREREE 88

Query: 237 AENPEAQLAAVQQC 278
            EN     ++++ C
Sbjct: 89  EENSLLSRSSLESC 102


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,132,466
Number of Sequences: 27780
Number of extensions: 355715
Number of successful extensions: 1368
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1244
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1340
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -