BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= NRPG0435 (681 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U41992-1|AAA83354.2| 514|Caenorhabditis elegans Importin alpha ... 253 1e-67 AF040995-1|AAB97171.1| 514|Caenorhabditis elegans importin alph... 253 1e-67 AF005266-1|AAQ13407.1| 423|Caenorhabditis elegans importin alph... 200 6e-52 U80444-4|AAB37790.1| 531|Caenorhabditis elegans Importin alpha ... 141 4e-34 AF326936-1|AAG49386.1| 531|Caenorhabditis elegans importin beta... 141 4e-34 AF040996-1|AAB97172.1| 531|Caenorhabditis elegans importin alph... 141 4e-34 Z74043-9|CAA98540.1| 524|Caenorhabditis elegans Hypothetical pr... 50 1e-06 AF040997-1|AAB97173.1| 524|Caenorhabditis elegans importin alph... 50 1e-06 AF024493-2|AAB70323.1| 322|Caenorhabditis elegans Hypothetical ... 39 0.003 Z73908-4|CAA98127.2| 447|Caenorhabditis elegans Hypothetical pr... 37 0.015 AL110479-24|CAJ76966.1| 1084|Caenorhabditis elegans Hypothetical... 37 0.015 AL110479-23|CAB60320.2| 1254|Caenorhabditis elegans Hypothetical... 37 0.015 AF003136-1|AAK21379.3| 896|Caenorhabditis elegans Importin beta... 33 0.14 Z83120-3|CAB05587.1| 419|Caenorhabditis elegans Hypothetical pr... 33 0.19 Z83120-2|CAB05586.1| 883|Caenorhabditis elegans Hypothetical pr... 33 0.19 AC024744-4|AAK72071.3| 1192|Caenorhabditis elegans Hypothetical ... 31 0.58 AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical ... 31 0.76 AF067608-11|AAC17656.2| 368|Caenorhabditis elegans Hypothetical... 31 1.0 U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily ass... 29 3.1 AF003389-4|AAN63407.1| 598|Caenorhabditis elegans Hypothetical ... 29 3.1 AF003389-3|AAC71136.1| 1003|Caenorhabditis elegans Hypothetical ... 29 3.1 AC006621-3|AAK68263.1| 368|Caenorhabditis elegans Hypothetical ... 29 3.1 Z79755-7|CAB02103.1| 466|Caenorhabditis elegans Hypothetical pr... 29 4.1 U68185-1|AAC47444.1| 1042|Caenorhabditis elegans ADM-1 prepropro... 29 4.1 AL032626-12|CAA21545.1| 1042|Caenorhabditis elegans Hypothetical... 29 4.1 L23645-8|AAK26133.1| 282|Caenorhabditis elegans Peroxisome asse... 28 5.4 AL033509-1|CAA22059.1| 1494|Caenorhabditis elegans Hypothetical ... 28 5.4 Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical pr... 28 7.1 Z75547-11|CAA99905.4| 394|Caenorhabditis elegans Hypothetical p... 28 7.1 AF047661-2|AAK71389.1| 886|Caenorhabditis elegans Hypothetical ... 27 9.4 AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical ... 27 9.4 AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical ... 27 9.4 AC024761-2|AAF59463.1| 174|Caenorhabditis elegans Hypothetical ... 27 9.4 >U41992-1|AAA83354.2| 514|Caenorhabditis elegans Importin alpha family protein 3 protein. Length = 514 Score = 253 bits (619), Expect = 1e-67 Identities = 128/223 (57%), Positives = 156/223 (69%), Gaps = 2/223 (0%) Frame = +3 Query: 18 SEKRMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDKNLA 197 S R +KN K+ + +RNE V +RK+KREE + KRRN+ D E Sbjct: 2 SSNRQAYYKNNAKE-QIGKEKRNEEVVSIRKDKREEAISKRRNINTQIEDDSETSTTPPG 60 Query: 198 TTDLD--ELVMNAANAENPEAQLAAVQQCRKLLSCDKNPPIDELIAAGILPILVQCLSRA 371 D + L + AA + +P QL AVQQ RK+LS D+NPPID+LI +GILP+LVQCLS Sbjct: 61 PFDANLLRLTVAAAQSSDPAEQLTAVQQARKMLSTDRNPPIDDLIGSGILPVLVQCLSST 120 Query: 372 DNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHENVCDQAVWALGNIIG 551 D P LQFE AWALTNIASGTS QT VV+AGAVP+FLQLL + NVC+Q+VWALGNIIG Sbjct: 121 D-PNLQFEAAWALTNIASGTSEQTQAVVNAGAVPLFLQLLSCGNLNVCEQSVWALGNIIG 179 Query: 552 DGPVLRDFVIELGVVKPLLSLIKSDIPIPFLRNVTWVIVNLCR 680 DGP RD+ +ELG+++PLL I +IPI FLRNVTWVIVNLCR Sbjct: 180 DGPHFRDYCLELGILQPLLQFINPEIPIGFLRNVTWVIVNLCR 222 Score = 45.6 bits (103), Expect = 3e-05 Identities = 34/125 (27%), Positives = 55/125 (44%), Gaps = 1/125 (0%) Frame = +3 Query: 303 NPPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFL 482 N I +I A ++ LV L D +Q A+ NI +GT QT V+ +G + Sbjct: 267 NEHIQMVIEAQVVTHLVPLLGHVD-VKVQTAALRAVGNIVTGTDEQTQLVLDSGVLRFMP 325 Query: 483 QLLMSPHENVCDQAVWALGNIIGDGPVLRDFVIELGVVKPLLSLI-KSDIPIPFLRNVTW 659 LL E + +AVW + NI V + G++ ++ L+ + D P + W Sbjct: 326 GLLAHYKEKINKEAVWFVSNITAGNQQQVQDVFDAGIMPMIIHLLDRGDFPTQ--KEAAW 383 Query: 660 VIVNL 674 I N+ Sbjct: 384 AISNV 388 Score = 31.5 bits (68), Expect = 0.58 Identities = 24/101 (23%), Positives = 37/101 (36%) Frame = +3 Query: 315 DELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLM 494 D + GIL L+Q ++ W + N+ + V +P L+ Sbjct: 186 DYCLELGILQPLLQFINPEIPIGFLRNVTWVIVNLCRCKDPAPSPAVVRTILPALSLLIH 245 Query: 495 SPHENVCDQAVWALGNIIGDGPVLRDFVIELGVVKPLLSLI 617 N+ VWAL + G VIE VV L+ L+ Sbjct: 246 HQDTNILIDTVWALSYLTDGGNEHIQMVIEAQVVTHLVPLL 286 >AF040995-1|AAB97171.1| 514|Caenorhabditis elegans importin alpha 3 protein. Length = 514 Score = 253 bits (619), Expect = 1e-67 Identities = 128/223 (57%), Positives = 156/223 (69%), Gaps = 2/223 (0%) Frame = +3 Query: 18 SEKRMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDKNLA 197 S R +KN K+ + +RNE V +RK+KREE + KRRN+ D E Sbjct: 2 SSNRQAYYKNNAKE-QIGKEKRNEEVVSIRKDKREEAISKRRNINTQIEDDSETSTTPPG 60 Query: 198 TTDLD--ELVMNAANAENPEAQLAAVQQCRKLLSCDKNPPIDELIAAGILPILVQCLSRA 371 D + L + AA + +P QL AVQQ RK+LS D+NPPID+LI +GILP+LVQCLS Sbjct: 61 PFDANLLRLTVAAAQSSDPAEQLTAVQQARKMLSTDRNPPIDDLIGSGILPVLVQCLSST 120 Query: 372 DNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHENVCDQAVWALGNIIG 551 D P LQFE AWALTNIASGTS QT VV+AGAVP+FLQLL + NVC+Q+VWALGNIIG Sbjct: 121 D-PNLQFEAAWALTNIASGTSEQTQAVVNAGAVPLFLQLLSCGNLNVCEQSVWALGNIIG 179 Query: 552 DGPVLRDFVIELGVVKPLLSLIKSDIPIPFLRNVTWVIVNLCR 680 DGP RD+ +ELG+++PLL I +IPI FLRNVTWVIVNLCR Sbjct: 180 DGPHFRDYCLELGILQPLLQFINPEIPIGFLRNVTWVIVNLCR 222 Score = 45.6 bits (103), Expect = 3e-05 Identities = 34/125 (27%), Positives = 55/125 (44%), Gaps = 1/125 (0%) Frame = +3 Query: 303 NPPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFL 482 N I +I A ++ LV L D +Q A+ NI +GT QT V+ +G + Sbjct: 267 NEHIQMVIEAQVVTHLVPLLGHVD-VKVQTAALRAVGNIVTGTDEQTQLVLDSGVLRFMP 325 Query: 483 QLLMSPHENVCDQAVWALGNIIGDGPVLRDFVIELGVVKPLLSLI-KSDIPIPFLRNVTW 659 LL E + +AVW + NI V + G++ ++ L+ + D P + W Sbjct: 326 GLLAHYKEKINKEAVWFVSNITAGNQQQVQDVFDAGIMPMIIHLLDRGDFPTQ--KEAAW 383 Query: 660 VIVNL 674 I N+ Sbjct: 384 AISNV 388 Score = 31.5 bits (68), Expect = 0.58 Identities = 24/101 (23%), Positives = 37/101 (36%) Frame = +3 Query: 315 DELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLM 494 D + GIL L+Q ++ W + N+ + V +P L+ Sbjct: 186 DYCLELGILQPLLQFINPEIPIGFLRNVTWVIVNLCRCKDPAPSPAVVRTILPALSLLIH 245 Query: 495 SPHENVCDQAVWALGNIIGDGPVLRDFVIELGVVKPLLSLI 617 N+ VWAL + G VIE VV L+ L+ Sbjct: 246 HQDTNILIDTVWALSYLTDGGNEHIQMVIEAQVVTHLVPLL 286 >AF005266-1|AAQ13407.1| 423|Caenorhabditis elegans importin alpha-3 subunit protein. Length = 423 Score = 200 bits (489), Expect = 6e-52 Identities = 94/132 (71%), Positives = 110/132 (83%) Frame = +3 Query: 285 LLSCDKNPPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAG 464 +LS D+NPPID+LI +GILP+LVQCLS D P LQFE AWALTNIASGTS QT VV+AG Sbjct: 1 MLSTDRNPPIDDLIGSGILPVLVQCLSSTD-PNLQFEAAWALTNIASGTSEQTQAVVNAG 59 Query: 465 AVPVFLQLLMSPHENVCDQAVWALGNIIGDGPVLRDFVIELGVVKPLLSLIKSDIPIPFL 644 AVP+FLQLL + NVC+Q+VWALGNIIGDGP RD+ +ELG+++PLL I +IPI FL Sbjct: 60 AVPLFLQLLSCGNLNVCEQSVWALGNIIGDGPHFRDYCLELGILQPLLQFINPEIPIGFL 119 Query: 645 RNVTWVIVNLCR 680 RNVTWVIVNLCR Sbjct: 120 RNVTWVIVNLCR 131 Score = 45.6 bits (103), Expect = 3e-05 Identities = 34/125 (27%), Positives = 55/125 (44%), Gaps = 1/125 (0%) Frame = +3 Query: 303 NPPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFL 482 N I +I A ++ LV L D +Q A+ NI +GT QT V+ +G + Sbjct: 176 NEHIQMVIEAQVVTHLVPLLGHVD-VKVQTAALRAVGNIVTGTDEQTQLVLDSGVLRFMP 234 Query: 483 QLLMSPHENVCDQAVWALGNIIGDGPVLRDFVIELGVVKPLLSLI-KSDIPIPFLRNVTW 659 LL E + +AVW + NI V + G++ ++ L+ + D P + W Sbjct: 235 GLLAHYKEKINKEAVWFVSNITAGNQQQVQDVFDAGIMPMIIHLLDRGDFPTQ--KEAAW 292 Query: 660 VIVNL 674 I N+ Sbjct: 293 AISNV 297 Score = 31.5 bits (68), Expect = 0.58 Identities = 24/101 (23%), Positives = 37/101 (36%) Frame = +3 Query: 315 DELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLM 494 D + GIL L+Q ++ W + N+ + V +P L+ Sbjct: 95 DYCLELGILQPLLQFINPEIPIGFLRNVTWVIVNLCRCKDPAPSPAVVRTILPALSLLIH 154 Query: 495 SPHENVCDQAVWALGNIIGDGPVLRDFVIELGVVKPLLSLI 617 N+ VWAL + G VIE VV L+ L+ Sbjct: 155 HQDTNILIDTVWALSYLTDGGNEHIQMVIEAQVVTHLVPLL 195 >U80444-4|AAB37790.1| 531|Caenorhabditis elegans Importin alpha family protein 2 protein. Length = 531 Score = 141 bits (342), Expect = 4e-34 Identities = 85/230 (36%), Positives = 126/230 (54%), Gaps = 12/230 (5%) Frame = +3 Query: 27 RMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNV--------PISYSTDEEEI 182 R+ +KN K +E+RRRR E +VE+RK K + + KRRN+ S + E+I Sbjct: 21 RLQQYKNLTKH-EELRRRRTECSVEIRKQKGADMMMKRRNIVDVDEGGNSESELEEPEKI 79 Query: 183 DKNLATTDLDELVMNAANAENP--EAQLAAVQQCRKLLSCDKNPPIDELIAAGILPILVQ 356 ++T L + A + NP + + + RK LS KNPPIDE+I G+L LVQ Sbjct: 80 SHQQSSTRLSNDEIRAILSNNPSEDDMVRCFESLRKSLSKTKNPPIDEVIHCGLLQALVQ 139 Query: 357 CLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHENVCDQAVWAL 536 LS +N +Q+E AWALTNI SG++ QT V AG + L + + +QA+WA+ Sbjct: 140 ALS-VENERVQYEAAWALTNIVSGSTEQTIAAVEAGVTIPLIHLSVHQSAQISEQALWAV 198 Query: 537 GNIIGDGPVLRDFVIELGVVKPLLSLIK--SDIPIPFLRNVTWVIVNLCR 680 NI GD LRD+VI+ V+ L+ L++ + +R + W N+CR Sbjct: 199 ANIAGDSSQLRDYVIKCHGVEALMHLMEKVDQLGDSHVRTIAWAFSNMCR 248 Score = 44.8 bits (101), Expect = 6e-05 Identities = 34/137 (24%), Positives = 62/137 (45%), Gaps = 2/137 (1%) Frame = +3 Query: 153 ISYSTD--EEEIDKNLATTDLDELVMNAANAENPEAQLAAVQQCRKLLSCDKNPPIDELI 326 +SY TD +E+I+ + L +V AEN +A + ++ + +I Sbjct: 285 VSYLTDGPDEQIELARESGVLPHVVAFFKEAEN---LVAPALRTLGNVATGNDSLTQAVI 341 Query: 327 AAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHE 506 G L ++ + + + ++ E W ++NI +GT Q V+ A +PV + +L S Sbjct: 342 DLGSLDEILPLMEKTRSSSIVKECCWLVSNIIAGTQKQIQAVLDANLLPVLINVLKSGDH 401 Query: 507 NVCDQAVWALGNIIGDG 557 +A WAL N+ G Sbjct: 402 KCQFEASWALSNLAQGG 418 Score = 41.1 bits (92), Expect = 7e-04 Identities = 28/125 (22%), Positives = 52/125 (41%) Frame = +3 Query: 300 KNPPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVF 479 KNP + + LV+ + D Q + WA++ + G Q +G +P Sbjct: 250 KNPHAPLEVLRVLSKGLVKLVQHTDRQVRQ-DACWAVSYLTDGPDEQIELARESGVLPHV 308 Query: 480 LQLLMSPHENVCDQAVWALGNIIGDGPVLRDFVIELGVVKPLLSLIKSDIPIPFLRNVTW 659 + EN+ A+ LGN+ L VI+LG + +L L++ ++ W Sbjct: 309 VAFFKEA-ENLVAPALRTLGNVATGNDSLTQAVIDLGSLDEILPLMEKTRSSSIVKECCW 367 Query: 660 VIVNL 674 ++ N+ Sbjct: 368 LVSNI 372 >AF326936-1|AAG49386.1| 531|Caenorhabditis elegans importin beta binding domain proteinprotein. Length = 531 Score = 141 bits (342), Expect = 4e-34 Identities = 85/230 (36%), Positives = 126/230 (54%), Gaps = 12/230 (5%) Frame = +3 Query: 27 RMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNV--------PISYSTDEEEI 182 R+ +KN K +E+RRRR E +VE+RK K + + KRRN+ S + E+I Sbjct: 21 RLQQYKNLTKH-EELRRRRTECSVEIRKQKGADMMMKRRNIVDVDEGGNSESELEEPEKI 79 Query: 183 DKNLATTDLDELVMNAANAENP--EAQLAAVQQCRKLLSCDKNPPIDELIAAGILPILVQ 356 ++T L + A + NP + + + RK LS KNPPIDE+I G+L LVQ Sbjct: 80 SHQQSSTRLSNDEIRAILSNNPSEDDMVRCFESLRKSLSKTKNPPIDEVIHCGLLQALVQ 139 Query: 357 CLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHENVCDQAVWAL 536 LS +N +Q+E AWALTNI SG++ QT V AG + L + + +QA+WA+ Sbjct: 140 ALS-VENERVQYEAAWALTNIVSGSTEQTIAAVEAGVTIPLIHLSVHQSAQISEQALWAV 198 Query: 537 GNIIGDGPVLRDFVIELGVVKPLLSLIK--SDIPIPFLRNVTWVIVNLCR 680 NI GD LRD+VI+ V+ L+ L++ + +R + W N+CR Sbjct: 199 ANIAGDSSQLRDYVIKCHGVEALMHLMEKVDQLGDSHVRTIAWAFSNMCR 248 Score = 44.8 bits (101), Expect = 6e-05 Identities = 34/137 (24%), Positives = 62/137 (45%), Gaps = 2/137 (1%) Frame = +3 Query: 153 ISYSTD--EEEIDKNLATTDLDELVMNAANAENPEAQLAAVQQCRKLLSCDKNPPIDELI 326 +SY TD +E+I+ + L +V AEN +A + ++ + +I Sbjct: 285 VSYLTDGPDEQIELARESGVLPHVVAFFKEAEN---LVAPALRTLGNVATGNDSLTQAVI 341 Query: 327 AAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHE 506 G L ++ + + + ++ E W ++NI +GT Q V+ A +PV + +L S Sbjct: 342 DLGSLDEILPLMEKTRSSSIVKECCWLVSNIIAGTQKQIQAVLDANLLPVLINVLKSGDH 401 Query: 507 NVCDQAVWALGNIIGDG 557 +A WAL N+ G Sbjct: 402 KCQFEASWALSNLAQGG 418 Score = 41.1 bits (92), Expect = 7e-04 Identities = 28/125 (22%), Positives = 52/125 (41%) Frame = +3 Query: 300 KNPPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVF 479 KNP + + LV+ + D Q + WA++ + G Q +G +P Sbjct: 250 KNPHAPLEVLRVLSKGLVKLVQHTDRQVRQ-DACWAVSYLTDGPDEQIELARESGVLPHV 308 Query: 480 LQLLMSPHENVCDQAVWALGNIIGDGPVLRDFVIELGVVKPLLSLIKSDIPIPFLRNVTW 659 + EN+ A+ LGN+ L VI+LG + +L L++ ++ W Sbjct: 309 VAFFKEA-ENLVAPALRTLGNVATGNDSLTQAVIDLGSLDEILPLMEKTRSSSIVKECCW 367 Query: 660 VIVNL 674 ++ N+ Sbjct: 368 LVSNI 372 >AF040996-1|AAB97172.1| 531|Caenorhabditis elegans importin alpha 2 protein. Length = 531 Score = 141 bits (342), Expect = 4e-34 Identities = 85/230 (36%), Positives = 126/230 (54%), Gaps = 12/230 (5%) Frame = +3 Query: 27 RMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNV--------PISYSTDEEEI 182 R+ +KN K +E+RRRR E +VE+RK K + + KRRN+ S + E+I Sbjct: 21 RLQQYKNLTKH-EELRRRRTECSVEIRKQKGADMMMKRRNIVDVDEGGNSESELEEPEKI 79 Query: 183 DKNLATTDLDELVMNAANAENP--EAQLAAVQQCRKLLSCDKNPPIDELIAAGILPILVQ 356 ++T L + A + NP + + + RK LS KNPPIDE+I G+L LVQ Sbjct: 80 SHQQSSTRLSNDEIRAILSNNPSEDDMVRCFESLRKSLSKTKNPPIDEVIHCGLLQALVQ 139 Query: 357 CLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHENVCDQAVWAL 536 LS +N +Q+E AWALTNI SG++ QT V AG + L + + +QA+WA+ Sbjct: 140 ALS-VENERVQYEAAWALTNIVSGSTEQTIAAVEAGVTIPLIHLSVHQSAQISEQALWAV 198 Query: 537 GNIIGDGPVLRDFVIELGVVKPLLSLIK--SDIPIPFLRNVTWVIVNLCR 680 NI GD LRD+VI+ V+ L+ L++ + +R + W N+CR Sbjct: 199 ANIAGDSSQLRDYVIKCHGVEALMHLMEKVDQLGDSHVRTIAWAFSNMCR 248 Score = 44.8 bits (101), Expect = 6e-05 Identities = 34/137 (24%), Positives = 62/137 (45%), Gaps = 2/137 (1%) Frame = +3 Query: 153 ISYSTD--EEEIDKNLATTDLDELVMNAANAENPEAQLAAVQQCRKLLSCDKNPPIDELI 326 +SY TD +E+I+ + L +V AEN +A + ++ + +I Sbjct: 285 VSYLTDGPDEQIELARESGVLPHVVAFFKEAEN---LVAPALRTLGNVATGNDSLTQAVI 341 Query: 327 AAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHE 506 G L ++ + + + ++ E W ++NI +GT Q V+ A +PV + +L S Sbjct: 342 DLGSLDEILPLMEKTRSSSIVKECCWLVSNIIAGTQKQIQAVLDANLLPVLINVLKSGDH 401 Query: 507 NVCDQAVWALGNIIGDG 557 +A WAL N+ G Sbjct: 402 KCQFEASWALSNLAQGG 418 Score = 41.1 bits (92), Expect = 7e-04 Identities = 28/125 (22%), Positives = 52/125 (41%) Frame = +3 Query: 300 KNPPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVF 479 KNP + + LV+ + D Q + WA++ + G Q +G +P Sbjct: 250 KNPHAPLEVLRVLSKGLVKLVQHTDRQVRQ-DACWAVSYLTDGPDEQIELARESGVLPHV 308 Query: 480 LQLLMSPHENVCDQAVWALGNIIGDGPVLRDFVIELGVVKPLLSLIKSDIPIPFLRNVTW 659 + EN+ A+ LGN+ L VI+LG + +L L++ ++ W Sbjct: 309 VAFFKEA-ENLVAPALRTLGNVATGNDSLTQAVIDLGSLDEILPLMEKTRSSSIVKECCW 367 Query: 660 VIVNL 674 ++ N+ Sbjct: 368 LVSNI 372 >Z74043-9|CAA98540.1| 524|Caenorhabditis elegans Hypothetical protein T19B10.7 protein. Length = 524 Score = 50.4 bits (115), Expect = 1e-06 Identities = 22/60 (36%), Positives = 38/60 (63%) Frame = +3 Query: 15 SSEKRMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDKNL 194 S E+R ++K+ +D +EMRR+R E V++RKN+R+E ++ R + + S EE + L Sbjct: 8 SHEERSKMYKSNVRDQNEMRRKRREDEVQIRKNRRDEKFERNRQITVQRSLSHEETSELL 67 >AF040997-1|AAB97173.1| 524|Caenorhabditis elegans importin alpha 1 protein. Length = 524 Score = 50.4 bits (115), Expect = 1e-06 Identities = 22/60 (36%), Positives = 38/60 (63%) Frame = +3 Query: 15 SSEKRMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDKNL 194 S E+R ++K+ +D +EMRR+R E V++RKN+R+E ++ R + + S EE + L Sbjct: 8 SHEERSKMYKSNVRDQNEMRRKRREDEVQIRKNRRDEKFERNRQITVQRSLSHEETSELL 67 >AF024493-2|AAB70323.1| 322|Caenorhabditis elegans Hypothetical protein F23F1.5 protein. Length = 322 Score = 39.1 bits (87), Expect = 0.003 Identities = 20/63 (31%), Positives = 35/63 (55%) Frame = +3 Query: 27 RMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDKNLATTD 206 R +KN K ++ +RR E T+E +KN R +T K RN+ T +E+ ++ + TT Sbjct: 28 RYSQYKNLTKAAEQQAKRREE-TLERQKNGRFDTFMKLRNLAFDDVTSDEDDEQKIETTT 86 Query: 207 LDE 215 ++ Sbjct: 87 AEK 89 >Z73908-4|CAA98127.2| 447|Caenorhabditis elegans Hypothetical protein F53B2.5 protein. Length = 447 Score = 36.7 bits (81), Expect = 0.015 Identities = 14/56 (25%), Positives = 29/56 (51%) Frame = +3 Query: 387 QFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHENVCDQAVWALGNIIGD 554 + W +TN+ + T+ V++ + + ++L+ S + + Q VWA+ NI D Sbjct: 58 EVNAVWIITNMCCISQEVTHLFVNSNCLDILIKLVRSQNARLSSQTVWAIANIAAD 113 Score = 33.5 bits (73), Expect = 0.14 Identities = 26/100 (26%), Positives = 46/100 (46%), Gaps = 9/100 (9%) Frame = +3 Query: 324 IAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPH 503 + + L IL++ L R+ N L +T WA+ NIA+ S+ K + + + L + + Sbjct: 80 VNSNCLDILIK-LVRSQNARLSSQTVWAIANIAADCSSCKLKCRSPKLLKILARNLQTSY 138 Query: 504 E-NVCD--QAVWALGNIIGDG------PVLRDFVIELGVV 596 + + D Q +W + NI G PV R + L + Sbjct: 139 KLDDADRRQLIWCVNNIFSGGRTTMPSPVARSLICALSAI 178 Score = 31.9 bits (69), Expect = 0.44 Identities = 16/57 (28%), Positives = 29/57 (50%) Frame = +3 Query: 414 NIASGTSAQTNKVVHAGAVPVFLQLLMSPHENVCDQAVWALGNIIGDGPVLRDFVIE 584 NIA G QT+ +V V + + MS E+ +A W + N++ P D++++ Sbjct: 246 NIAVGNDVQTDLLVDNPKFRVVMNIAMSSPEHH-SEAAWIISNVVAGAPRHVDYIMD 301 >AL110479-24|CAJ76966.1| 1084|Caenorhabditis elegans Hypothetical protein Y105C5B.21b protein. Length = 1084 Score = 36.7 bits (81), Expect = 0.015 Identities = 41/149 (27%), Positives = 72/149 (48%), Gaps = 9/149 (6%) Frame = +3 Query: 207 LDELVMNAANAENPEAQLAAVQQCRKLLSCDKNPPIDELIAAGILPILVQCLSRADNPAL 386 L E++ ++A+ + QL A + L D N +E G +P L+ L R+D P + Sbjct: 523 LKEVIEYLSSADK-DKQLNASGYLQHLTYTD-NQIKEETREYGGIPKLIALL-RSDTPRI 579 Query: 387 QFETAWALTNIASGTSAQTNK--VVHAGAVPVFLQLLMSPHE-NVCDQAVWALGNIIGDG 557 Q L N++ G NK V+ A V + ++L + H+ +V ++A AL N+ Sbjct: 580 QKNACACLKNLSFGKENDANKLAVMEADGVRLIAEVLRTTHDASVKEEAAAALWNLSSAD 639 Query: 558 ---PVLRDFVIEL---GVVKPLLSLIKSD 626 PV+ + E+ V+ P+L++ SD Sbjct: 640 MLKPVILESATEILSQQVIAPVLAVGTSD 668 >AL110479-23|CAB60320.2| 1254|Caenorhabditis elegans Hypothetical protein Y105C5B.21a protein. Length = 1254 Score = 36.7 bits (81), Expect = 0.015 Identities = 41/149 (27%), Positives = 72/149 (48%), Gaps = 9/149 (6%) Frame = +3 Query: 207 LDELVMNAANAENPEAQLAAVQQCRKLLSCDKNPPIDELIAAGILPILVQCLSRADNPAL 386 L E++ ++A+ + QL A + L D N +E G +P L+ L R+D P + Sbjct: 693 LKEVIEYLSSADK-DKQLNASGYLQHLTYTD-NQIKEETREYGGIPKLIALL-RSDTPRI 749 Query: 387 QFETAWALTNIASGTSAQTNK--VVHAGAVPVFLQLLMSPHE-NVCDQAVWALGNIIGDG 557 Q L N++ G NK V+ A V + ++L + H+ +V ++A AL N+ Sbjct: 750 QKNACACLKNLSFGKENDANKLAVMEADGVRLIAEVLRTTHDASVKEEAAAALWNLSSAD 809 Query: 558 ---PVLRDFVIEL---GVVKPLLSLIKSD 626 PV+ + E+ V+ P+L++ SD Sbjct: 810 MLKPVILESATEILSQQVIAPVLAVGTSD 838 >AF003136-1|AAK21379.3| 896|Caenorhabditis elegans Importin beta family protein 1 protein. Length = 896 Score = 33.5 bits (73), Expect = 0.14 Identities = 28/104 (26%), Positives = 45/104 (43%), Gaps = 2/104 (1%) Frame = +3 Query: 375 NPALQFETA--WALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHENVCDQAVWALGNII 548 NP +++ A A +I G + + A+P + + + NV D A W+LG +I Sbjct: 383 NPDWKYKEAAIMAFGSILDGPDPKKLLPMAQEALPAIVAAMCDKNVNVRDTAAWSLGRVI 442 Query: 549 GDGPVLRDFVIELGVVKPLLSLIKSDIPIPFLRNVTWVIVNLCR 680 L + L V P+LS P NV W +V+L + Sbjct: 443 DTCSELANNAELLQSVLPVLSNGLHQEP-RVANNVCWALVSLVK 485 >Z83120-3|CAB05587.1| 419|Caenorhabditis elegans Hypothetical protein R06A4.4b protein. Length = 419 Score = 33.1 bits (72), Expect = 0.19 Identities = 17/51 (33%), Positives = 32/51 (62%), Gaps = 2/51 (3%) Frame = +3 Query: 477 FLQLLMSPHE-NVCDQAVWALGNI-IGDGPVLRDFVIELGVVKPLLSLIKS 623 FL + P + +VC+ A+WALG + + GP ++ F+ +++PL+ +I S Sbjct: 240 FLAQNLDPSKISVCNNAIWALGELALKMGPAMKQFIGP--IIEPLIVVINS 288 >Z83120-2|CAB05586.1| 883|Caenorhabditis elegans Hypothetical protein R06A4.4a protein. Length = 883 Score = 33.1 bits (72), Expect = 0.19 Identities = 17/51 (33%), Positives = 32/51 (62%), Gaps = 2/51 (3%) Frame = +3 Query: 477 FLQLLMSPHE-NVCDQAVWALGNI-IGDGPVLRDFVIELGVVKPLLSLIKS 623 FL + P + +VC+ A+WALG + + GP ++ F+ +++PL+ +I S Sbjct: 704 FLAQNLDPSKISVCNNAIWALGELALKMGPAMKQFIGP--IIEPLIVVINS 752 >AC024744-4|AAK72071.3| 1192|Caenorhabditis elegans Hypothetical protein Y108G3AL.7 protein. Length = 1192 Score = 31.5 bits (68), Expect = 0.58 Identities = 15/44 (34%), Positives = 28/44 (63%) Frame = +3 Query: 108 KNKREETLQKRRNVPISYSTDEEEIDKNLATTDLDELVMNAANA 239 + +R + +KR++ S T +EE ++LATTD + V+N A++ Sbjct: 260 ERERARSRRKRKDEASSAVTSDEEDQEDLATTDSENPVINGASS 303 >AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical protein Y55B1BR.3 protein. Length = 679 Score = 31.1 bits (67), Expect = 0.76 Identities = 18/80 (22%), Positives = 43/80 (53%) Frame = +3 Query: 45 NAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDKNLATTDLDELVM 224 ++ D EM RRR + + K +++ +++R V S S DE+E +K + + + Sbjct: 246 DSSDDDSEMERRRKKSKKSKKSKKFKKSEKRKRAVNDSSSDDEDEEEKPEKRSKKSKKAV 305 Query: 225 NAANAENPEAQLAAVQQCRK 284 +++E+ E + ++ ++ +K Sbjct: 306 IDSSSEDEEEEKSSKKRSKK 325 >AF067608-11|AAC17656.2| 368|Caenorhabditis elegans Hypothetical protein B0511.11 protein. Length = 368 Score = 30.7 bits (66), Expect = 1.0 Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 2/36 (5%) Frame = +3 Query: 114 KREETLQKRRNVPIS--YSTDEEEIDKNLATTDLDE 215 K+E+ KR NVP++ YS + KN +TT L E Sbjct: 98 KKEDDKSKRENVPLTVVYSNPSISVSKNFSTTPLAE 133 >U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily assigned gene nameprotein 312 protein. Length = 656 Score = 29.1 bits (62), Expect = 3.1 Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 2/98 (2%) Frame = +3 Query: 54 KDVDEMRRRRNEVTVELRKN-KREETLQKRRNVPISYSTDEEEIDKNLATTDLDELVMNA 230 K+ +EMR+R ++ E+R N +R + ++K ++E+ L + + + Sbjct: 222 KEKEEMRQRMSDEMSEMRNNIERLQKMEKALERENERLNHQKELSDKLKVVNEENNDLRQ 281 Query: 231 ANAENPEAQLAAVQQCRKLLSCDKNPPIDELIA-AGIL 341 AEN +LA ++ + C+ + DEL A GIL Sbjct: 282 NLAEN-HLELAMIKSELAQVRCEFDQKQDELSARRGIL 318 >AF003389-4|AAN63407.1| 598|Caenorhabditis elegans Hypothetical protein F23H11.4b protein. Length = 598 Score = 29.1 bits (62), Expect = 3.1 Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 2/74 (2%) Frame = +3 Query: 96 VELRKNKREETLQKR-RNVPISYSTDEEEIDKNLATTDLDELVMNAANAENPEAQLAAVQ 272 V L +K+E+ L R RN+ +S+ DE+ + + T D+ + + A + L V Sbjct: 341 VSLTSSKKEKRLHCRLRNMQLSFHDDEDSTEPSNGTFDIKGIYLFRHMASDTPYILIHVG 400 Query: 273 QCRKLLS-CDKNPP 311 + R ++S ++PP Sbjct: 401 EKRNVISFIPEDPP 414 >AF003389-3|AAC71136.1| 1003|Caenorhabditis elegans Hypothetical protein F23H11.4a protein. Length = 1003 Score = 29.1 bits (62), Expect = 3.1 Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 2/74 (2%) Frame = +3 Query: 96 VELRKNKREETLQKR-RNVPISYSTDEEEIDKNLATTDLDELVMNAANAENPEAQLAAVQ 272 V L +K+E+ L R RN+ +S+ DE+ + + T D+ + + A + L V Sbjct: 341 VSLTSSKKEKRLHCRLRNMQLSFHDDEDSTEPSNGTFDIKGIYLFRHMASDTPYILIHVG 400 Query: 273 QCRKLLS-CDKNPP 311 + R ++S ++PP Sbjct: 401 EKRNVISFIPEDPP 414 >AC006621-3|AAK68263.1| 368|Caenorhabditis elegans Hypothetical protein C52A10.3 protein. Length = 368 Score = 29.1 bits (62), Expect = 3.1 Identities = 11/21 (52%), Positives = 16/21 (76%) Frame = -2 Query: 326 YELINRRVFITREQFSALLHS 264 YEL+ R +F+T EQ S +L+S Sbjct: 199 YELVGREIFLTSEQLSKVLNS 219 >Z79755-7|CAB02103.1| 466|Caenorhabditis elegans Hypothetical protein F43G9.10 protein. Length = 466 Score = 28.7 bits (61), Expect = 4.1 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 4/62 (6%) Frame = +3 Query: 42 KNAGKDVDEMRRRRNEVTVE--LRKNKREETLQKRRNV--PISYSTDEEEIDKNLATTDL 209 + +D D RRRR E + E R+++R E +RR V P E+E +N ++ Sbjct: 69 RETDRDDDRRRRRRRESSDEEDRRRHRRHEDYGRRRQVEKPEVLGKVEDESSENEQESEE 128 Query: 210 DE 215 DE Sbjct: 129 DE 130 >U68185-1|AAC47444.1| 1042|Caenorhabditis elegans ADM-1 preproprotein protein. Length = 1042 Score = 28.7 bits (61), Expect = 4.1 Identities = 20/79 (25%), Positives = 31/79 (39%), Gaps = 2/79 (2%) Frame = -3 Query: 439 CADVPEAMFVKAQAVSNCNAGLSALERH*TRMGSIPAAMSSSIGGFLSHESSFLHCCTAA 260 C + A +NC +G + M S+ +A + S HC T A Sbjct: 626 CKSIASAAVGLTSDGTNCASGRVCVAGSCVEMSSVSSATACPTNNLALLCSGHGHCTTTA 685 Query: 259 NCA--SGFSALAAFITSSS 209 C +G+S +A I S+S Sbjct: 686 RCVCFNGWSGVACDIRSNS 704 >AL032626-12|CAA21545.1| 1042|Caenorhabditis elegans Hypothetical protein Y37D8A.13 protein. Length = 1042 Score = 28.7 bits (61), Expect = 4.1 Identities = 20/79 (25%), Positives = 31/79 (39%), Gaps = 2/79 (2%) Frame = -3 Query: 439 CADVPEAMFVKAQAVSNCNAGLSALERH*TRMGSIPAAMSSSIGGFLSHESSFLHCCTAA 260 C + A +NC +G + M S+ +A + S HC T A Sbjct: 626 CKSIASAAVGLTSDGTNCASGRVCVAGSCVEMSSVSSATACPTNNLALLCSGHGHCTTTA 685 Query: 259 NCA--SGFSALAAFITSSS 209 C +G+S +A I S+S Sbjct: 686 RCVCFNGWSGVACDIRSNS 704 >L23645-8|AAK26133.1| 282|Caenorhabditis elegans Peroxisome assembly factor protein19 protein. Length = 282 Score = 28.3 bits (60), Expect = 5.4 Identities = 21/80 (26%), Positives = 31/80 (38%) Frame = +3 Query: 42 KNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDKNLATTDLDELV 221 + A KD +M + + E K + + P+ D E + A L E Sbjct: 56 QKAAKDFQKMLEQMVTLQEEAMKKAGADPSEGEGEQPLD-PNDPEALAMMDALKQLMECS 114 Query: 222 MNAANAENPEAQLAAVQQCR 281 N ANA NPE +A + R Sbjct: 115 SNVANASNPEEFMAGLDMLR 134 >AL033509-1|CAA22059.1| 1494|Caenorhabditis elegans Hypothetical protein Y113G7C.1 protein. Length = 1494 Score = 28.3 bits (60), Expect = 5.4 Identities = 14/42 (33%), Positives = 23/42 (54%) Frame = +3 Query: 63 DEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDK 188 DE R ++++ E R+ K EE +K + D+E+IDK Sbjct: 1057 DEERAKKDKRDAEERRKKDEERAKKDKEDAKKAKEDQEKIDK 1098 >Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical protein F36F2.3a protein. Length = 1128 Score = 27.9 bits (59), Expect = 7.1 Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 3/47 (6%) Frame = +3 Query: 54 KDVDEMRR---RRNEVTVELRKNKREETLQKRRNVPISYSTDEEEID 185 +D D+ RR RR++V + R+ KREE ++ + S DE+EID Sbjct: 585 RDRDDARRKDRRRDDVRKKERREKREEEDDDQKTKD-AESKDEDEID 630 >Z75547-11|CAA99905.4| 394|Caenorhabditis elegans Hypothetical protein R11D1.10a protein. Length = 394 Score = 27.9 bits (59), Expect = 7.1 Identities = 22/88 (25%), Positives = 38/88 (43%), Gaps = 6/88 (6%) Frame = +3 Query: 54 KDVDEMRRRRNEVTVELRKNKREETLQKRR-----NVPISYSTDEEEIDKNLATTDLDEL 218 KD DE+ RR ++ + ++ RE+ R N S +T EE + N D ++ Sbjct: 218 KDWDELEARRRKIFEDEKEKNREDDASIRESMVSANTEFSEATKEEMNEINNILQDAEQR 277 Query: 219 VMNAANAENPE-AQLAAVQQCRKLLSCD 299 V E + A+L + + + S D Sbjct: 278 VAETKKQEEHDAAELRTLMKSTRQKSLD 305 >AF047661-2|AAK71389.1| 886|Caenorhabditis elegans Hypothetical protein M70.3b protein. Length = 886 Score = 27.5 bits (58), Expect = 9.4 Identities = 14/27 (51%), Positives = 17/27 (62%) Frame = +3 Query: 321 LIAAGILPILVQCLSRADNPALQFETA 401 LI GIL I V C+S +P+ Q ETA Sbjct: 6 LIIIGILLISVFCISSGSSPSKQSETA 32 >AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical protein R148.3a protein. Length = 1115 Score = 27.5 bits (58), Expect = 9.4 Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 1/51 (1%) Frame = +3 Query: 33 HVFKNAGKDVDEMRRRRNEVTVELRK-NKREETLQKRRNVPISYSTDEEEI 182 H KNA D+ E +RR E+ E ++ + R + K N + S + +++ Sbjct: 822 HKLKNAESDLQEAKRRAEEIGAEKKELSDRLNEMLKNLNQSMQKSAENDKM 872 >AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical protein R148.3b protein. Length = 1130 Score = 27.5 bits (58), Expect = 9.4 Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 1/51 (1%) Frame = +3 Query: 33 HVFKNAGKDVDEMRRRRNEVTVELRK-NKREETLQKRRNVPISYSTDEEEI 182 H KNA D+ E +RR E+ E ++ + R + K N + S + +++ Sbjct: 834 HKLKNAESDLQEAKRRAEEIGAEKKELSDRLNEMLKNLNQSMQKSAENDKM 884 >AC024761-2|AAF59463.1| 174|Caenorhabditis elegans Hypothetical protein Y38C1AA.9 protein. Length = 174 Score = 27.5 bits (58), Expect = 9.4 Identities = 16/74 (21%), Positives = 32/74 (43%) Frame = +3 Query: 57 DVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDKNLATTDLDELVMNAAN 236 +VD++ + VE+ + EE K+R V + +E + + + A L E Sbjct: 29 EVDDVGNKTISGEVEISDVEAEEKTDKKREVDANDIQEEVKAELDKAVESLKETAREREE 88 Query: 237 AENPEAQLAAVQQC 278 EN ++++ C Sbjct: 89 EENSLLSRSSLESC 102 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,132,466 Number of Sequences: 27780 Number of extensions: 355715 Number of successful extensions: 1368 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 1244 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1340 length of database: 12,740,198 effective HSP length: 79 effective length of database: 10,545,578 effective search space used: 1550199966 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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