Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0428
         (699 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8IK23 Cluster: Putative uncharacterized protein; n=1; ...    38   0.31 
UniRef50_Q2FP16 Cluster: Putative uncharacterized protein; n=1; ...    36   0.72 
UniRef50_Q81RH1 Cluster: Phosphoglycerate mutase family protein;...    36   1.3  
UniRef50_Q7NBN0 Cluster: Cation-transporting ATPase; n=1; Mycopl...    34   2.9  
UniRef50_Q4FYS1 Cluster: Cysteine peptidase, Clan CA, family C2,...    34   3.9  
UniRef50_A3J735 Cluster: Magnesium and cobalt transport protein ...    33   6.7  
UniRef50_Q55FV0 Cluster: Putative uncharacterized protein; n=1; ...    33   6.7  
UniRef50_Q8I4Y2 Cluster: Putative uncharacterized protein; n=1; ...    33   8.9  
UniRef50_Q4YTV7 Cluster: Putative uncharacterized protein; n=1; ...    33   8.9  
UniRef50_A3DLS6 Cluster: TatD-related deoxyribonuclease; n=1; St...    33   8.9  

>UniRef50_Q8IK23 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 284

 Score = 37.5 bits (83), Expect = 0.31
 Identities = 17/47 (36%), Positives = 29/47 (61%)
 Frame = -2

Query: 275 NRSRNRKGNKDFTKKKIHNYFPNKMEKKYSKFYLNFELYFCLVIFIV 135
           + + N   NKD   K ++++  NKM  K +KFY +F  + CLV++I+
Sbjct: 17  DNNNNNVNNKD---KNVYSFNSNKMNNKSNKFYSSFH-FMCLVVYII 59


>UniRef50_Q2FP16 Cluster: Putative uncharacterized protein; n=1;
           Methanospirillum hungatei JF-1|Rep: Putative
           uncharacterized protein - Methanospirillum hungatei
           (strain JF-1 / DSM 864)
          Length = 403

 Score = 36.3 bits (80), Expect = 0.72
 Identities = 27/97 (27%), Positives = 43/97 (44%)
 Frame = +1

Query: 367 FSLLNLKYQIRSKLVNEKKNYLIKAKAFYEYPTVFSKSFPIDIVR*NMVLLSQSLIKYSN 546
           F+L    Y  +S+ +N KK Y +     Y   T F++ +   +     ++L +   KY  
Sbjct: 265 FTLPRFSYSHKSRQINPKKVYAVDNGLIYANTTGFTEDYGRLLENLVFIMLRK---KYRE 321

Query: 547 GSQFGIVHKECDFFPEKKKKQNRFINLHYFIVYTLKD 657
              F   H ECDF  ++K K  R I + Y +    KD
Sbjct: 322 LFYFREKH-ECDFIVKEKTKVTRAIQVCYEVTSRNKD 357


>UniRef50_Q81RH1 Cluster: Phosphoglycerate mutase family protein;
           n=10; Bacillus|Rep: Phosphoglycerate mutase family
           protein - Bacillus anthracis
          Length = 196

 Score = 35.5 bits (78), Expect = 1.3
 Identities = 19/61 (31%), Positives = 33/61 (54%)
 Frame = +1

Query: 511 VLLSQSLIKYSNGSQFGIVHKECDFFPEKKKKQNRFINLHYFIVYTLKDFSGHTKIVDRF 690
           + L + L++++NG Q G+  +E   +PE K   +RF N   FI + ++     +KIV   
Sbjct: 74  IQLEEELMEFNNGVQAGLSFEEAKKYPEPKFLHDRFENGESFIEFRMRIEGIFSKIVTEN 133

Query: 691 T 693
           T
Sbjct: 134 T 134


>UniRef50_Q7NBN0 Cluster: Cation-transporting ATPase; n=1;
           Mycoplasma gallisepticum|Rep: Cation-transporting ATPase
           - Mycoplasma gallisepticum
          Length = 931

 Score = 34.3 bits (75), Expect = 2.9
 Identities = 15/65 (23%), Positives = 32/65 (49%)
 Frame = +1

Query: 409 VNEKKNYLIKAKAFYEYPTVFSKSFPIDIVR*NMVLLSQSLIKYSNGSQFGIVHKECDFF 588
           + + KN ++  + +Y+Y  +F++   ID++  +  +   SL  YS G  + I   + + F
Sbjct: 753 IQKSKNDVMNVRPYYKYENLFARRMGIDLLWQSCFIALMSLAAYSIGINYAIYSDQIEIF 812

Query: 589 PEKKK 603
               K
Sbjct: 813 KSFNK 817


>UniRef50_Q4FYS1 Cluster: Cysteine peptidase, Clan CA, family C2,
           putative; n=3; Leishmania|Rep: Cysteine peptidase, Clan
           CA, family C2, putative - Leishmania major strain
           Friedlin
          Length = 5358

 Score = 33.9 bits (74), Expect = 3.9
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = -2

Query: 257 KGNKDFTKKKIHNYFPNKMEKKYSKFYLNFE 165
           KG+  F +   H+++P  +EK Y+KFY+ +E
Sbjct: 736 KGDTVFCRSPTHHWWPLLLEKAYAKFYMRYE 766


>UniRef50_A3J735 Cluster: Magnesium and cobalt transport protein
           CorA; n=3; Flavobacteriales|Rep: Magnesium and cobalt
           transport protein CorA - Flavobacteria bacterium BAL38
          Length = 359

 Score = 33.1 bits (72), Expect = 6.7
 Identities = 19/62 (30%), Positives = 32/62 (51%)
 Frame = +1

Query: 238 VKSLLPFRFRERFAYHQYNFLSRNNI*RPIKMKLPPNDSRHEFFSLLNLKYQIRSKLVNE 417
           VKSLLP       +Y Q +F+ ++N      M L   + R +FF+ +  + +I S ++  
Sbjct: 114 VKSLLPIENSNTISYEQISFILKDN------MLLSFQEKRSDFFTYIRERIRINSGVIRT 167

Query: 418 KK 423
           KK
Sbjct: 168 KK 169


>UniRef50_Q55FV0 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 1181

 Score = 33.1 bits (72), Expect = 6.7
 Identities = 18/67 (26%), Positives = 34/67 (50%)
 Frame = +1

Query: 367 FSLLNLKYQIRSKLVNEKKNYLIKAKAFYEYPTVFSKSFPIDIVR*NMVLLSQSLIKYSN 546
           +SL     ++  K++ + +    + +    +  +F K  PIDI R N  +LSQ  I ++N
Sbjct: 382 YSLNTFNLELLKKVIEKNEKQQKQQQQKQVFQEIFKKYVPIDIYRENETVLSQVEIIFNN 441

Query: 547 GSQFGIV 567
            S+  I+
Sbjct: 442 NSKESIL 448


>UniRef50_Q8I4Y2 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 742

 Score = 32.7 bits (71), Expect = 8.9
 Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
 Frame = -2

Query: 278 ANRSRNRKGNKDFTKKKIHNYFPNKMEKKYSKFY--LNFELYFCLVI 144
           A R    K N +   K   NYF NK   KY+  +   N  LYFC ++
Sbjct: 171 AERVHMVKSNNNNDNKNNDNYFTNKSYNKYNNIFDEKNMFLYFCTIL 217


>UniRef50_Q4YTV7 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium berghei|Rep: Putative uncharacterized protein
           - Plasmodium berghei
          Length = 136

 Score = 32.7 bits (71), Expect = 8.9
 Identities = 19/63 (30%), Positives = 34/63 (53%)
 Frame = -2

Query: 242 FTKKKIHNYFPNKMEKKYSKFYLNFELYFCLVIFIVM*LQVQNCCTHDNKEWYLKELFWF 63
           F+KKKI NYF      K+ K++++  +Y  + + I + + +   CT +N  + L   F+ 
Sbjct: 9   FSKKKIINYF------KF-KYFIHIYIYIYMCVCIYLLICIHFLCTCNNYTYSLYYYFFR 61

Query: 62  QFC 54
            FC
Sbjct: 62  NFC 64


>UniRef50_A3DLS6 Cluster: TatD-related deoxyribonuclease; n=1;
           Staphylothermus marinus F1|Rep: TatD-related
           deoxyribonuclease - Staphylothermus marinus (strain ATCC
           43588 / DSM 3639 / F1)
          Length = 286

 Score = 32.7 bits (71), Expect = 8.9
 Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
 Frame = +1

Query: 355 RHEFFSLLNLKYQIRSKLVNEKKNYLIKAKAFYEYP-TVFSKSFPIDIVR*NMVLLSQSL 531
           ++ ++  +  K +I SK+++EK+NY++    F + P      S+P DI +    LLS+ +
Sbjct: 204 KYGYWYTVPAKKRILSKVLSEKRNYILVESDFIDDPDRPGVSSYPWDIPKRIKELLSEGI 263

Query: 532 IKYSN 546
           I   N
Sbjct: 264 INVEN 268


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 629,329,428
Number of Sequences: 1657284
Number of extensions: 11984827
Number of successful extensions: 30471
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 28994
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30456
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55371905986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)