Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0428
         (699 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    23   2.4  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    22   4.2  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    22   5.5  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   7.3  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   9.7  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   9.7  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   9.7  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   9.7  

>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = -3

Query: 268 PEIEKATRTSLRKKFTTTFPTK 203
           P     TRT+L  KFTT   TK
Sbjct: 163 PTTSTTTRTTLTTKFTTKPSTK 184


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +1

Query: 361 EFFSLLNLKYQIRSKLVNEKKN 426
           E  + L L Y+IR    NEKKN
Sbjct: 277 EVKTTLLLAYKIRQVFPNEKKN 298



 Score = 21.0 bits (42), Expect = 9.7
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +1

Query: 562 IVHKECDFFPEKKKKQNRFINLHYFIVYTLKDFS 663
           + +K    FP +KK  + FIN+   ++    DFS
Sbjct: 284 LAYKIRQVFPNEKKNISEFINV---VLNNYPDFS 314


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +2

Query: 539 IVMVRNLVLYTKNVIFFLKKKKN 607
           I   +NL LY+K ++  LKK K+
Sbjct: 79  ITKAKNL-LYSKQIVTILKKTKS 100


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = +1

Query: 76  SFRYHSLLSWVQQFCTCNYITINITKQKYNSKF 174
           +F+Y  +L     F     ITINI K   N  F
Sbjct: 19  NFKYLKVLVTFAHFICLFPITINIRKNGLNYNF 51


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 6/14 (42%), Positives = 8/14 (57%)
 Frame = -3

Query: 52  SCYTIRYNLDSCFR 11
           +CY   YN   C+R
Sbjct: 72  ACYDCPYNTQDCYR 85


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +1

Query: 619 INLHYFIVYTLKDFSGHTKIVDR 687
           +NLH++  + +  F G  +IVD+
Sbjct: 203 LNLHHWHWHLVYPFEGAREIVDK 225


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = -2

Query: 212 PNKMEKKYSKFYLN 171
           P+++E KY+ ++LN
Sbjct: 339 PSEVEDKYTTYFLN 352


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = -2

Query: 194 KYSKFYLNFELYFCLVIFIVM*LQVQNCCTH 102
           ++ +FY  F +YF +   + M LQ     T+
Sbjct: 147 EFFQFYAQFIVYFLIYAVLEMLLQKYKTVTY 177


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,415
Number of Sequences: 336
Number of extensions: 3549
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)