Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0428
         (699 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81533-4|CAB04338.1|  280|Caenorhabditis elegans Hypothetical pr...    30   1.4  
U53155-2|AAC48266.2|  918|Caenorhabditis elegans Valyl trna synt...    29   3.2  
AL033514-26|CAA22110.1| 1144|Caenorhabditis elegans Hypothetical...    28   5.6  
AF016428-2|AAO26002.1|  316|Caenorhabditis elegans Serpentine re...    28   5.6  
U41021-5|AAA82335.2|  652|Caenorhabditis elegans Hypothetical pr...    28   7.4  
AY887908-1|AAX34420.1|  652|Caenorhabditis elegans anion transpo...    28   7.4  

>Z81533-4|CAB04338.1|  280|Caenorhabditis elegans Hypothetical
           protein F36G9.7 protein.
          Length = 280

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 14/69 (20%), Positives = 37/69 (53%), Gaps = 8/69 (11%)
 Frame = -2

Query: 314 ILFLDRKLYW--------W*ANRSRNRKGNKDFTKKKIHNYFPNKMEKKYSKFYLNFELY 159
           ++F+DR +YW        +     R R   +   K+++  +  +K  +  SK  +NF+++
Sbjct: 87  LIFIDRLIYWKHKFDALNFEVKFPRPRSSIRKSNKEQVKQWETDKSNRSSSKKLMNFKVF 146

Query: 158 FCLVIFIVM 132
           + +++++V+
Sbjct: 147 WRIIVYLVI 155


>U53155-2|AAC48266.2|  918|Caenorhabditis elegans Valyl trna
           synthetase protein 1 protein.
          Length = 918

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = -2

Query: 587 KKSHSLCTIPNCEPLLYFIKDCDKSTMF*RTMSIGKDLEKT 465
           KK H  C +P  +  L+   D D   MF   +S+ + LEKT
Sbjct: 820 KKDHMACPVPGHDAKLWMRIDADCKEMF--ILSLKRQLEKT 858


>AL033514-26|CAA22110.1| 1144|Caenorhabditis elegans Hypothetical
           protein Y75B8A.26 protein.
          Length = 1144

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = +2

Query: 263 FGNGSLTTSTIFYQEIISSVQLK*NFRPMIQGMN 364
           FGN     S  FY +++ S QLK +FR   QG N
Sbjct: 336 FGN---ELSNYFYDQVVGSCQLKTDFRHFQQGEN 366


>AF016428-2|AAO26002.1|  316|Caenorhabditis elegans Serpentine
           receptor, class g (gamma)protein 65 protein.
          Length = 316

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = -2

Query: 218 YFPNKMEKKYSKFYLNFELYFCLVIFI 138
           Y+P K +K +SK+YL+  L F L  F+
Sbjct: 128 YWPYKYDKFWSKYYLHCGLAFALYSFL 154


>U41021-5|AAA82335.2|  652|Caenorhabditis elegans Hypothetical
           protein F14D12.5 protein.
          Length = 652

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 11/18 (61%), Positives = 15/18 (83%)
 Frame = -2

Query: 269 SRNRKGNKDFTKKKIHNY 216
           S NR+GN+ + KKKI+NY
Sbjct: 11  SFNREGNETWVKKKINNY 28


>AY887908-1|AAX34420.1|  652|Caenorhabditis elegans anion
           transporter SULP-2 protein.
          Length = 652

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 11/18 (61%), Positives = 15/18 (83%)
 Frame = -2

Query: 269 SRNRKGNKDFTKKKIHNY 216
           S NR+GN+ + KKKI+NY
Sbjct: 11  SFNREGNETWVKKKINNY 28


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,096,475
Number of Sequences: 27780
Number of extensions: 304887
Number of successful extensions: 774
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 752
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 774
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)