Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0427
         (670 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   3.0  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   3.0  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    23   3.0  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    22   4.0  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   9.1  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -1

Query: 457 SCCVCPCDLSYV 422
           SC VC CD  Y+
Sbjct: 773 SCTVCTCDAKYL 784


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -1

Query: 139 INKICPLSRIIEQCVILLHKTFTDCIVL 56
           +NKIC L   + + V L ++TF   ++L
Sbjct: 502 LNKICALHHHLSKLVKLFNETFGIVLLL 529


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -1

Query: 139 INKICPLSRIIEQCVILLHKTFTDCIVL 56
           +NKIC L   + + V L ++TF   ++L
Sbjct: 227 LNKICALHHHLSKLVKLFNETFGIVLLL 254


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 12/45 (26%), Positives = 23/45 (51%)
 Frame = -1

Query: 571 NFINSLTK*IQEKYNVYQMSRILIQQLYVISNFKLSISSCCVCPC 437
           +F++++   + EK NV  +   ++  L V  NF   +S   +C C
Sbjct: 232 DFLDNVDTIMYEKTNVTFVHLAVLNILRVGKNFVCLLSLIILCDC 276


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +2

Query: 527 IIFFLYLFRQRIYEIERTRRL*NY 598
           I+FF+YL+ Q+   +  ++ L  Y
Sbjct: 18  ILFFIYLYWQQTSNLTTSKLLYTY 41


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,562
Number of Sequences: 336
Number of extensions: 3502
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17385535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)