Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0426
         (594 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A2ZDV6 Cluster: Putative uncharacterized protein; n=2; ...    33   5.0  
UniRef50_Q6NM17 Cluster: At5g63050; n=4; core eudicotyledons|Rep...    33   6.7  
UniRef50_UPI0000DA3F90 Cluster: PREDICTED: similar to serine/thr...    32   8.8  
UniRef50_Q4GYC1 Cluster: Putative uncharacterized protein; n=1; ...    32   8.8  

>UniRef50_A2ZDV6 Cluster: Putative uncharacterized protein; n=2;
           Oryza sativa|Rep: Putative uncharacterized protein -
           Oryza sativa subsp. indica (Rice)
          Length = 133

 Score = 33.1 bits (72), Expect = 5.0
 Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
 Frame = -1

Query: 555 LGRRRA-CELNAPPRRRVNLTSWVWPHD---IVIKRYILIFAIPWT 430
           +GRRRA C   +PPRR    TSW   HD   + IK    +  +PWT
Sbjct: 19  IGRRRAECWAASPPRRS---TSWACGHDGEEVTIKELKPVEPLPWT 61


>UniRef50_Q6NM17 Cluster: At5g63050; n=4; core eudicotyledons|Rep:
           At5g63050 - Arabidopsis thaliana (Mouse-ear cress)
          Length = 345

 Score = 32.7 bits (71), Expect = 6.7
 Identities = 20/70 (28%), Positives = 32/70 (45%)
 Frame = -1

Query: 495 SWVWPHDIVIKRYILIFAIPWTTVAYVLLVKLVSR*MSKHWIFGFL*CFHIVLFYLQMSF 316
           SW W  D  IK  +L+F +P     Y +    V++ +S  W+ G L    I+  Y++M  
Sbjct: 192 SWFWSLDAAIKIPLLLF-VPAFLAVYAICGAEVTKELSPMWVVGPL----IIALYIKMFQ 246

Query: 315 SNCIFFIHIF 286
             C  +   F
Sbjct: 247 GLCSLYAFCF 256


>UniRef50_UPI0000DA3F90 Cluster: PREDICTED: similar to
           serine/threonine kinase; n=3; Rattus norvegicus|Rep:
           PREDICTED: similar to serine/threonine kinase - Rattus
           norvegicus
          Length = 918

 Score = 32.3 bits (70), Expect = 8.8
 Identities = 17/42 (40%), Positives = 23/42 (54%)
 Frame = -3

Query: 490 GMAARYCHKTIYTYFCNTLDYCCVCPLSQTRQSLDVKALDLW 365
           G+A +   +   T FC TL YC   P   + QS D +ALD+W
Sbjct: 158 GLAIKVNTEQKSTVFCGTLPYC--APELFSIQSYDPRALDIW 197


>UniRef50_Q4GYC1 Cluster: Putative uncharacterized protein; n=1;
           Trypanosoma brucei|Rep: Putative uncharacterized protein
           - Trypanosoma brucei
          Length = 111

 Score = 32.3 bits (70), Expect = 8.8
 Identities = 17/72 (23%), Positives = 37/72 (51%)
 Frame = -1

Query: 471 VIKRYILIFAIPWTTVAYVLLVKLVSR*MSKHWIFGFL*CFHIVLFYLQMSFSNCIFFIH 292
           V KR++LI   PW  ++Y  +   +   +  H+ F F+  F ++LF+L   F+    F+ 
Sbjct: 35  VSKRFLLIEDCPWQFLSYHFIFLSLVLFVLYHFSFRFIYYFILLLFHLLFYFTFVSIFVS 94

Query: 291 IFQSYLCIWKCY 256
              ++  +++ +
Sbjct: 95  AAHTHTLLFQLH 106


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 576,526,310
Number of Sequences: 1657284
Number of extensions: 11022122
Number of successful extensions: 27136
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 26352
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27124
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41488046300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)